RNA–Protein interactions for RNA: ENST00000330871.3

SOCS3-201, Transcript of suppressor of cytokine signaling 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOCS3, Length 2,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOCS3-201ENST00000330871 C11orf44Q8N8P7 122 aa12.45□□□□□ -0.42
SOCS3-201ENST00000330871 C16orf74Q96GX8 76 aa12.45□□□□□ -0.42
SOCS3-201ENST00000330871 SETXQ7Z333 2677 aaKnown RBP12.44□□□□□ -0.42
SOCS3-201ENST00000330871 LRRK2Q5S007 2527 aa12.44□□□□□ -0.42
SOCS3-201ENST00000330871 ABCA12Q86UK0 2595 aa12.44□□□□□ -0.42
SOCS3-201ENST00000330871 PLAC8L1A1L4L8 177 aa12.44□□□□□ -0.42
SOCS3-201ENST00000330871 GIG44P09565 113 aaPredicted RBP12.42□□□□□ -0.42
SOCS3-201ENST00000330871 BBC3Q96PG8 261 aaPredicted RBP12.42□□□□□ -0.42
SOCS3-201ENST00000330871 DAD1P61803 113 aa12.42□□□□□ -0.42
SOCS3-201ENST00000330871 CCL24O00175 119 aa12.41□□□□□ -0.42
SOCS3-201ENST00000330871 ESRGQ1W209 222 aa12.41□□□□□ -0.42
SOCS3-201ENST00000330871 C9orf66Q5T8R8 295 aa12.41□□□□□ -0.42
SOCS3-201ENST00000330871 FAM208BQ5VWN6 2430 aa12.41□□□□□ -0.42
SOCS3-201ENST00000330871 IGLV10-54A0A075B6I4 117 aa12.4□□□□□ -0.42
SOCS3-201ENST00000330871 A0A1W2PRX2 142 aa12.4□□□□□ -0.42
SOCS3-201ENST00000330871 CR1P17927 2039 aa12.4□□□□□ -0.42
SOCS3-201ENST00000330871 LRCOL1A6NCL2 159 aa12.4□□□□□ -0.42
SOCS3-201ENST00000330871 PRYO14603 147 aa12.4□□□□□ -0.42
SOCS3-201ENST00000330871 CMC4P56277 68 aaPredicted RBP12.4□□□□□ -0.42
SOCS3-201ENST00000330871 KIAA0087Q14695 138 aa12.4□□□□□ -0.42
SOCS3-201ENST00000330871 FUSP35637 526 aaKnown RBP eCLIP12.39□□□□□ -0.43
SOCS3-201ENST00000330871 A0A096LPF7 62 aa12.39□□□□□ -0.43
SOCS3-201ENST00000330871 HIGD2AQ9BW72 106 aa12.38□□□□□ -0.43
SOCS3-201ENST00000330871 WFDC10AQ9H1F0 79 aa12.38□□□□□ -0.43
SOCS3-201ENST00000330871 APCP25054 2843 aa12.37□□□□□ -0.43
SOCS3-201ENST00000330871 PDE6GP18545 87 aa12.37□□□□□ -0.43
SOCS3-201ENST00000330871 ZNF469Q96JG9 3925 aaPredicted RBP12.37□□□□□ -0.43
SOCS3-201ENST00000330871 Q6ZTC4 211 aa12.36□□□□□ -0.43
SOCS3-201ENST00000330871 LINC01006Q8NI28 216 aa12.36□□□□□ -0.43
SOCS3-201ENST00000330871 COX17Q14061 63 aa12.35□□□□□ -0.43
SOCS3-201ENST00000330871 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.35□□□□□ -0.43
SOCS3-201ENST00000330871 GCN1Q92616 2671 aaKnown RBP12.35□□□□□ -0.43
SOCS3-201ENST00000330871 CD164L2Q6UWJ8 174 aa12.35□□□□□ -0.43
SOCS3-201ENST00000330871 CCDC168Q8NDH2 2452 aa12.35□□□□□ -0.43
SOCS3-201ENST00000330871 IGSF10Q6WRI0 2623 aa12.34□□□□□ -0.43
SOCS3-201ENST00000330871 CSNK1G2-AS1Q8NCQ2 148 aa12.34□□□□□ -0.43
SOCS3-201ENST00000330871 C10orf25Q5T742 122 aa12.33□□□□□ -0.44
SOCS3-201ENST00000330871 DEFB130BP0DP73 79 aa12.33□□□□□ -0.44
SOCS3-201ENST00000330871 DEFB130AP0DP74 79 aa12.33□□□□□ -0.44
SOCS3-201ENST00000330871 OCR1Q9BZK8 76 aa12.32□□□□□ -0.44
SOCS3-201ENST00000330871 DEFB113Q30KQ7 82 aa12.32□□□□□ -0.44
SOCS3-201ENST00000330871 ERC2-IT1O76042 136 aa12.31□□□□□ -0.44
SOCS3-201ENST00000330871 IGKV4-1P06312 121 aa12.31□□□□□ -0.44
SOCS3-201ENST00000330871 KRTAP10-9P60411 292 aa12.31□□□□□ -0.44
SOCS3-201ENST00000330871 UNQ6190/PRO20217Q6UXQ8 127 aa12.31□□□□□ -0.44
SOCS3-201ENST00000330871 GYPEP15421 78 aa12.31□□□□□ -0.44
SOCS3-201ENST00000330871 CHCHD10Q8WYQ3 142 aaPredicted RBP12.3□□□□□ -0.44
SOCS3-201ENST00000330871 C19orf73Q9NVV2 129 aa12.3□□□□□ -0.44
SOCS3-201ENST00000330871 USP24Q9UPU5 2620 aa12.3□□□□□ -0.44
SOCS3-201ENST00000330871 IGLV6-57P01721 117 aa12.3□□□□□ -0.44
SOCS3-201ENST00000330871 DNAJC9-AS1A6NH13 148 aa12.29□□□□□ -0.44
SOCS3-201ENST00000330871 IGHV4-28A0A0C4DH34 117 aa12.28□□□□□ -0.44
SOCS3-201ENST00000330871 A0A1B0GUV1 79 aa12.27□□□□□ -0.45
SOCS3-201ENST00000330871 IGLV1-51P01701 117 aa12.27□□□□□ -0.45
SOCS3-201ENST00000330871 PMAIP1Q13794 54 aa12.27□□□□□ -0.45
SOCS3-201ENST00000330871 CELA1Q9UNI1 258 aa12.27□□□□□ -0.45
SOCS3-201ENST00000330871 DIRC1Q969H9 104 aa12.25□□□□□ -0.45
SOCS3-201ENST00000330871 XAGE1AQ9HD64 81 aa12.25□□□□□ -0.45
SOCS3-201ENST00000330871 FAM30AQ9NZY2 134 aa12.25□□□□□ -0.45
SOCS3-201ENST00000330871 C3orf84H3BNL1 204 aa12.24□□□□□ -0.45
SOCS3-201ENST00000330871 ANGP03950 147 aaKnown RBP12.24□□□□□ -0.45
SOCS3-201ENST00000330871 COX7BP24311 80 aa12.24□□□□□ -0.45
SOCS3-201ENST00000330871 PSPHP1O15172 72 aa12.24□□□□□ -0.45
SOCS3-201ENST00000330871 Q6ZRP5 223 aa12.24□□□□□ -0.45
SOCS3-201ENST00000330871 PRR15Q8IV56 129 aa12.24□□□□□ -0.45
SOCS3-201ENST00000330871 ESM1Q9NQ30 184 aa12.23□□□□□ -0.45
SOCS3-201ENST00000330871 KLK12Q9UKR0 248 aa12.23□□□□□ -0.45
SOCS3-201ENST00000330871 hDV103S1A0JD37 113 aa12.23□□□□□ -0.45
SOCS3-201ENST00000330871 LINC00612Q8N6U2 182 aa12.23□□□□□ -0.45
SOCS3-201ENST00000330871 MTORP42345 2549 aa12.21□□□□□ -0.45
SOCS3-201ENST00000330871 ZNF73O43830 326 aaPredicted RBP12.21□□□□□ -0.45
SOCS3-201ENST00000330871 REG3AQ06141 175 aa12.21□□□□□ -0.46
SOCS3-201ENST00000330871 SPAG11BQ08648 103 aa12.21□□□□□ -0.46
SOCS3-201ENST00000330871 CYSRT1A8MQ03 144 aa12.2□□□□□ -0.46
SOCS3-201ENST00000330871 H3BQ85 93 aa12.19□□□□□ -0.46
SOCS3-201ENST00000330871 C1orf64Q8NEQ6 169 aa12.19□□□□□ -0.46
SOCS3-201ENST00000330871 SMIM29Q86T20 159 aa12.19□□□□□ -0.46
SOCS3-201ENST00000330871 KRTAP1-3Q8IUG1 177 aa12.19□□□□□ -0.46
SOCS3-201ENST00000330871 PRB2P02812 416 aaPredicted RBP12.18□□□□□ -0.46
SOCS3-201ENST00000330871 PRO0255Q9UI72 69 aa12.17□□□□□ -0.46
SOCS3-201ENST00000330871 PRR4Q16378 134 aa12.17□□□□□ -0.46
SOCS3-201ENST00000330871 ZNF462Q96JM2 2506 aa12.16□□□□□ -0.46
SOCS3-201ENST00000330871 ELOF1P60002 83 aaKnown RBP12.16□□□□□ -0.46
SOCS3-201ENST00000330871 Q6ZRU5 148 aa12.16□□□□□ -0.46
SOCS3-201ENST00000330871 Q1T7F1 81 aa12.14□□□□□ -0.47
SOCS3-201ENST00000330871 HIGD2BQ4VC39 106 aa12.14□□□□□ -0.47
SOCS3-201ENST00000330871 ACANP16112 2415 aa12.12□□□□□ -0.47
SOCS3-201ENST00000330871 A8MU10 97 aa12.12□□□□□ -0.47
SOCS3-201ENST00000330871 TRAV22A0A0B4J277 110 aa12.11□□□□□ -0.47
SOCS3-201ENST00000330871 A0A0J9YWU9 116 aa12.11□□□□□ -0.47
SOCS3-201ENST00000330871 IGHV4-30-4P0DP06 118 aa12.11□□□□□ -0.47
SOCS3-201ENST00000330871 C6orf48Q9UBA6 75 aa12.1□□□□□ -0.47
SOCS3-201ENST00000330871 UBR5O95071 2799 aaPredicted RBP12.09□□□□□ -0.47
SOCS3-201ENST00000330871 DEFB105AQ8NG35 78 aa12.09□□□□□ -0.47
SOCS3-201ENST00000330871 X6R8D5 127 aa12.09□□□□□ -0.47
SOCS3-201ENST00000330871 ITPR3Q14573 2671 aa12.07□□□□□ -0.48
SOCS3-201ENST00000330871 A8MUN3 132 aa12.05□□□□□ -0.48
SOCS3-201ENST00000330871 LINC00528Q8N1L1 170 aa12.05□□□□□ -0.48
SOCS3-201ENST00000330871 LYRM9A8MSI8 78 aa12.04□□□□□ -0.48
SOCS3-201ENST00000330871 DEFB4AO15263 64 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 540.1 ms