RNA–Protein interactions for RNA: ENST00000330394.2

EPHB3-201, Transcript of EPH receptor B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHB3, Length 4,236 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3-201ENST00000330394 SYCNQ0VAF6 134 aa9.87□□□□□ -0.83
EPHB3-201ENST00000330394 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.86□□□□□ -0.83
EPHB3-201ENST00000330394 NDUFB1O75438 58 aa9.86□□□□□ -0.83
EPHB3-201ENST00000330394 ATRQ13535 2644 aa9.85□□□□□ -0.83
EPHB3-201ENST00000330394 M0R378 163 aa9.85□□□□□ -0.83
EPHB3-201ENST00000330394 LINC00575Q6W349 94 aa9.84□□□□□ -0.83
EPHB3-201ENST00000330394 LRBAP50851 2863 aa9.84□□□□□ -0.83
EPHB3-201ENST00000330394 TMEM254Q8TBM7 123 aa9.83□□□□□ -0.84
EPHB3-201ENST00000330394 MUC7Q8TAX7 377 aa9.83□□□□□ -0.84
EPHB3-201ENST00000330394 UBE2AP49459 152 aa9.82□□□□□ -0.84
EPHB3-201ENST00000330394 ATP5EP56381 51 aaPredicted RBP9.82□□□□□ -0.84
EPHB3-201ENST00000330394 LELP1Q5T871 98 aa9.82□□□□□ -0.84
EPHB3-201ENST00000330394 MGAM2Q2M2H8 2515 aa9.82□□□□□ -0.84
EPHB3-201ENST00000330394 TRBV7-6A0A0J9YX20 115 aa9.8□□□□□ -0.84
EPHB3-201ENST00000330394 J3QKU1 62 aa9.8□□□□□ -0.84
EPHB3-201ENST00000330394 PSPHP1O15172 72 aa9.8□□□□□ -0.84
EPHB3-201ENST00000330394 DCHS1Q96JQ0 3298 aa9.8□□□□□ -0.84
EPHB3-201ENST00000330394 KPRPQ5T749 579 aaPredicted RBP9.8□□□□□ -0.84
EPHB3-201ENST00000330394 ASPMQ8IZT6 3477 aa9.8□□□□□ -0.84
EPHB3-201ENST00000330394 PRYO14603 147 aa9.8□□□□□ -0.84
EPHB3-201ENST00000330394 IGLV1-51P01701 117 aa9.79□□□□□ -0.84
EPHB3-201ENST00000330394 RPS28P62857 69 aaKnown RBP9.79□□□□□ -0.84
EPHB3-201ENST00000330394 FLNAP21333 2647 aaKnown RBP9.79□□□□□ -0.84
EPHB3-201ENST00000330394 DEFB131BA0A096LNP1 70 aa9.79□□□□□ -0.84
EPHB3-201ENST00000330394 COL12A1Q99715 3063 aa9.78□□□□□ -0.84
EPHB3-201ENST00000330394 LINC01561Q8N1V8 128 aa9.78□□□□□ -0.84
EPHB3-201ENST00000330394 TRAV10A0A0B4J240 114 aa9.77□□□□□ -0.85
EPHB3-201ENST00000330394 CFAP46Q8IYW2 2715 aa9.77□□□□□ -0.85
EPHB3-201ENST00000330394 IGKV4-1P06312 121 aa9.77□□□□□ -0.85
EPHB3-201ENST00000330394 DEFB116Q30KQ4 102 aa9.77□□□□□ -0.85
EPHB3-201ENST00000330394 C11orf45Q8TAV5 145 aa9.77□□□□□ -0.85
EPHB3-201ENST00000330394 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.76□□□□□ -0.85
EPHB3-201ENST00000330394 A0A1B0GUV1 79 aa9.76□□□□□ -0.85
EPHB3-201ENST00000330394 DMXL1Q9Y485 3027 aa9.76□□□□□ -0.85
EPHB3-201ENST00000330394 C9orf129Q5T035 196 aaKnown RBP9.76□□□□□ -0.85
EPHB3-201ENST00000330394 SPATA3Q8NHX4 192 aa9.76□□□□□ -0.85
EPHB3-201ENST00000330394 C1orf137Q5JT78 98 aa9.75□□□□□ -0.85
EPHB3-201ENST00000330394 C10orf25Q5T742 122 aa9.75□□□□□ -0.85
EPHB3-201ENST00000330394 LINC00208Q96KT6 92 aa9.75□□□□□ -0.85
EPHB3-201ENST00000330394 CHKB-CPT1BH3BT56 60 aa9.75□□□□□ -0.85
EPHB3-201ENST00000330394 MRPL55Q7Z7F7 128 aaKnown RBP9.74□□□□□ -0.85
EPHB3-201ENST00000330394 ITPR3Q14573 2671 aa9.73□□□□□ -0.85
EPHB3-201ENST00000330394 MUC3AQ02505 3323 aa9.73□□□□□ -0.85
EPHB3-201ENST00000330394 A6NED7 52 aa9.73□□□□□ -0.85
EPHB3-201ENST00000330394 TM2D3Q9BRN9 247 aa9.73□□□□□ -0.85
EPHB3-201ENST00000330394 PRO0628Q9UI54 55 aa9.73□□□□□ -0.85
EPHB3-201ENST00000330394 SMR3AQ99954 134 aa9.73□□□□□ -0.85
EPHB3-201ENST00000330394 GCN1Q92616 2671 aaKnown RBP9.72□□□□□ -0.85
EPHB3-201ENST00000330394 KLK9Q2XQG4 91 aa9.72□□□□□ -0.85
EPHB3-201ENST00000330394 INAFM1C9JVW0 142 aa9.71□□□□□ -0.85
EPHB3-201ENST00000330394 EGFEM1PQ0D2K5 195 aa9.71□□□□□ -0.85
EPHB3-201ENST00000330394 MAST4O15021 2626 aa9.71□□□□□ -0.85
EPHB3-201ENST00000330394 DHRS4-AS1Q9P1J3 65 aa9.71□□□□□ -0.86
EPHB3-201ENST00000330394 PMAIP1Q13794 54 aa9.7□□□□□ -0.86
EPHB3-201ENST00000330394 NBEAL2Q6ZNJ1 2754 aa9.7□□□□□ -0.86
EPHB3-201ENST00000330394 ESRGQ1W209 222 aa9.69□□□□□ -0.86
EPHB3-201ENST00000330394 RETNQ9HD89 108 aa9.69□□□□□ -0.86
EPHB3-201ENST00000330394 Q6ZQT0 140 aa9.69□□□□□ -0.86
EPHB3-201ENST00000330394 Q6ZRU5 148 aa9.69□□□□□ -0.86
EPHB3-201ENST00000330394 CXCL6P80162 114 aa9.68□□□□□ -0.86
EPHB3-201ENST00000330394 ASH1LQ9NR48 2969 aaKnown RBP9.68□□□□□ -0.86
EPHB3-201ENST00000330394 IGHV4-30-4P0DP06 118 aa9.67□□□□□ -0.86
EPHB3-201ENST00000330394 OXLD1Q5BKU9 147 aa9.67□□□□□ -0.86
EPHB3-201ENST00000330394 FLNCQ14315 2725 aa9.66□□□□□ -0.86
EPHB3-201ENST00000330394 SMIM29Q86T20 159 aa9.66□□□□□ -0.86
EPHB3-201ENST00000330394 A0A087WSZ3 146 aa9.64□□□□□ -0.87
EPHB3-201ENST00000330394 ITPR1Q14643 2758 aa9.64□□□□□ -0.87
EPHB3-201ENST00000330394 Q6ZTC4 211 aa9.64□□□□□ -0.87
EPHB3-201ENST00000330394 LINC00474Q9P2X8 69 aa9.64□□□□□ -0.87
EPHB3-201ENST00000330394 UNC79Q9P2D8 2635 aa9.63□□□□□ -0.87
EPHB3-201ENST00000330394 B9D2Q9BPU9 175 aa9.63□□□□□ -0.87
EPHB3-201ENST00000330394 PRR15LQ9BU68 103 aa9.63□□□□□ -0.87
EPHB3-201ENST00000330394 C6orf48Q9UBA6 75 aa9.63□□□□□ -0.87
EPHB3-201ENST00000330394 KIAA0087Q14695 138 aa9.63□□□□□ -0.87
EPHB3-201ENST00000330394 SPINK6Q6UWN8 80 aa9.63□□□□□ -0.87
EPHB3-201ENST00000330394 ZFHX4Q86UP3 3567 aa9.61□□□□□ -0.87
EPHB3-201ENST00000330394 LYPD5Q6UWN5 251 aa9.61□□□□□ -0.87
EPHB3-201ENST00000330394 PCOTHQ58A44 107 aa9.6□□□□□ -0.87
EPHB3-201ENST00000330394 LINC00336Q6ZUF6 198 aa9.6□□□□□ -0.87
EPHB3-201ENST00000330394 LY6G6DO95868 133 aa9.58□□□□□ -0.88
EPHB3-201ENST00000330394 C2orf48Q96LS8 159 aa9.58□□□□□ -0.88
EPHB3-201ENST00000330394 IGLV9-49A0A0B4J1Y8 123 aa9.58□□□□□ -0.88
EPHB3-201ENST00000330394 DMDP11532 3685 aa9.57□□□□□ -0.88
EPHB3-201ENST00000330394 NOTCH1P46531 2555 aa9.56□□□□□ -0.88
EPHB3-201ENST00000330394 LOC110117498A0A087WWA1 95 aa9.56□□□□□ -0.88
EPHB3-201ENST00000330394 PRLHP81277 87 aa9.56□□□□□ -0.88
EPHB3-201ENST00000330394 FAM104AQ969W3 186 aa9.55□□□□□ -0.88
EPHB3-201ENST00000330394 LAMA5O15230 3695 aa9.55□□□□□ -0.88
EPHB3-201ENST00000330394 TNRC18O15417 2968 aaPredicted RBP9.55□□□□□ -0.88
EPHB3-201ENST00000330394 C7orf33Q8WU49 177 aa9.55□□□□□ -0.88
EPHB3-201ENST00000330394 CASC2Q6XLA1 102 aa9.55□□□□□ -0.88
EPHB3-201ENST00000330394 M0R2N4 97 aa9.54□□□□□ -0.88
EPHB3-201ENST00000330394 TEX15Q9BXT5 2789 aa9.54□□□□□ -0.88
EPHB3-201ENST00000330394 BCE1O60756 84 aa9.54□□□□□ -0.88
EPHB3-201ENST00000330394 X6R8D5 127 aa9.54□□□□□ -0.88
EPHB3-201ENST00000330394 HCG22E2RYF7 251 aa9.54□□□□□ -0.88
EPHB3-201ENST00000330394 H7BZZ5 65 aa9.54□□□□□ -0.88
EPHB3-201ENST00000330394 TEP1Q99973 2627 aaKnown RBP9.53□□□□□ -0.88
EPHB3-201ENST00000330394 H0Y9P7 68 aa9.53□□□□□ -0.88
EPHB3-201ENST00000330394 ELOF1P60002 83 aaKnown RBP9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms