RNA–Protein interactions for RNA: ENST00000329399.6

PDLIM1-201, Transcript of PDZ and LIM domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM1, Length 1,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-201ENST00000329399 A0A087WTM6 91 aa10.8□□□□□ -0.68
PDLIM1-201ENST00000329399 PFN2P35080 140 aa10.8□□□□□ -0.68
PDLIM1-201ENST00000329399 DAND5Q8N907 189 aa10.8□□□□□ -0.68
PDLIM1-201ENST00000329399 KRTAP17-1Q9BYP8 105 aa10.8□□□□□ -0.68
PDLIM1-201ENST00000329399 PGPEP1Q9NXJ5 209 aa10.8□□□□□ -0.68
PDLIM1-201ENST00000329399 A0A0U1RRA0 63 aa10.79□□□□□ -0.68
PDLIM1-201ENST00000329399 LRCOL1A6NCL2 159 aa10.79□□□□□ -0.68
PDLIM1-201ENST00000329399 RNF151Q2KHN1 245 aa10.79□□□□□ -0.68
PDLIM1-201ENST00000329399 C15orf56Q8N910 161 aa10.79□□□□□ -0.68
PDLIM1-201ENST00000329399 TRAV13-2A0A0B4J235 113 aa10.78□□□□□ -0.68
PDLIM1-201ENST00000329399 C16orf90A8MZG2 172 aa10.78□□□□□ -0.68
PDLIM1-201ENST00000329399 CAMK2N2Q96S95 79 aa10.78□□□□□ -0.68
PDLIM1-201ENST00000329399 NDUFC2O95298 119 aa10.77□□□□□ -0.69
PDLIM1-201ENST00000329399 UBE2V1Q13404 147 aa10.77□□□□□ -0.69
PDLIM1-201ENST00000329399 WFDC2Q14508 124 aa10.77□□□□□ -0.69
PDLIM1-201ENST00000329399 UNQ6190/PRO20217Q6UXQ8 127 aa10.77□□□□□ -0.69
PDLIM1-201ENST00000329399 SOSTDC1Q6X4U4 206 aa10.76□□□□□ -0.69
PDLIM1-201ENST00000329399 SND1-IT1Q9HBX3 110 aa10.76□□□□□ -0.69
PDLIM1-201ENST00000329399 GAGE10A6NGK3 116 aa10.75□□□□□ -0.69
PDLIM1-201ENST00000329399 TSPAN13O95857 204 aa10.75□□□□□ -0.69
PDLIM1-201ENST00000329399 NPC2P61916 151 aa10.75□□□□□ -0.69
PDLIM1-201ENST00000329399 TRBV20-1A0A075B6N2 111 aa10.74□□□□□ -0.69
PDLIM1-201ENST00000329399 COX6CP09669 75 aa10.74□□□□□ -0.69
PDLIM1-201ENST00000329399 SYCNQ0VAF6 134 aa10.74□□□□□ -0.69
PDLIM1-201ENST00000329399 C14orf177Q52M58 125 aa10.74□□□□□ -0.69
PDLIM1-201ENST00000329399 K7EP34 96 aa10.73□□□□□ -0.69
PDLIM1-201ENST00000329399 LECT2O14960 151 aa10.73□□□□□ -0.69
PDLIM1-201ENST00000329399 C10orf25Q5T742 122 aa10.73□□□□□ -0.69
PDLIM1-201ENST00000329399 C6orf48Q9UBA6 75 aa10.73□□□□□ -0.69
PDLIM1-201ENST00000329399 USP17L23D6RBM5 183 aa10.72□□□□□ -0.69
PDLIM1-201ENST00000329399 PSCAO43653 123 aa10.72□□□□□ -0.69
PDLIM1-201ENST00000329399 EIF4EBP3O60516 100 aaPredicted RBP10.72□□□□□ -0.69
PDLIM1-201ENST00000329399 HIGD2BQ4VC39 106 aa10.72□□□□□ -0.69
PDLIM1-201ENST00000329399 SPCS1Q9Y6A9 102 aa10.72□□□□□ -0.69
PDLIM1-201ENST00000329399 DNAH8Q96JB1 4490 aa10.71□□□□□ -0.69
PDLIM1-201ENST00000329399 Q1RN00 199 aa10.71□□□□□ -0.69
PDLIM1-201ENST00000329399 NDUFC2-KCTD14E9PQ53 114 aa10.7□□□□□ -0.7
PDLIM1-201ENST00000329399 PSMB2P49721 201 aa10.7□□□□□ -0.7
PDLIM1-201ENST00000329399 TLX1NBP0CAT3 122 aa10.69□□□□□ -0.7
PDLIM1-201ENST00000329399 RPL13AP40429 203 aaKnown RBP10.69□□□□□ -0.7
PDLIM1-201ENST00000329399 Q6ZRU5 148 aa10.69□□□□□ -0.7
PDLIM1-201ENST00000329399 ABCA13Q86UQ4 5058 aa10.69□□□□□ -0.7
PDLIM1-201ENST00000329399 SCGB1C2P0DMR2 95 aa10.68□□□□□ -0.7
PDLIM1-201ENST00000329399 KRTAP10-1P60331 282 aa10.68□□□□□ -0.7
PDLIM1-201ENST00000329399 C9orf116Q5BN46 136 aaPredicted RBP10.68□□□□□ -0.7
PDLIM1-201ENST00000329399 LINC00526Q96FQ7 95 aa10.68□□□□□ -0.7
PDLIM1-201ENST00000329399 CARD19Q96LW7 228 aa10.68□□□□□ -0.7
PDLIM1-201ENST00000329399 PCLOQ9Y6V0 5065 aa10.68□□□□□ -0.7
PDLIM1-201ENST00000329399 FAT1Q14517 4588 aa10.68□□□□□ -0.7
PDLIM1-201ENST00000329399 TRBV10-2A0A0K0K1G8 114 aa10.68□□□□□ -0.7
PDLIM1-201ENST00000329399 Q8N814 137 aa10.68□□□□□ -0.7
PDLIM1-201ENST00000329399 NAA38Q9BRA0 125 aaKnown RBP10.68□□□□□ -0.7
PDLIM1-201ENST00000329399 PKIGQ9Y2B9 76 aa10.68□□□□□ -0.7
PDLIM1-201ENST00000329399 KRTAP4-5Q9BYR2 181 aa10.67□□□□□ -0.7
PDLIM1-201ENST00000329399 IGKV2-28A0A075B6P5 120 aa10.66□□□□□ -0.7
PDLIM1-201ENST00000329399 IGKV2D-28P01615 120 aa10.66□□□□□ -0.7
PDLIM1-201ENST00000329399 TMEM126AQ9H061 195 aa10.66□□□□□ -0.7
PDLIM1-201ENST00000329399 CBY1Q9Y3M2 126 aa10.66□□□□□ -0.7
PDLIM1-201ENST00000329399 RPL28P46779 137 aaKnown RBP10.65□□□□□ -0.7
PDLIM1-201ENST00000329399 H7C2G1 150 aa10.64□□□□□ -0.71
PDLIM1-201ENST00000329399 CNBPP62633 177 aaKnown RBP10.63□□□□□ -0.71
PDLIM1-201ENST00000329399 LINC00337Q8N6G1 96 aa10.63□□□□□ -0.71
PDLIM1-201ENST00000329399 TRIAP1O43715 76 aa10.62□□□□□ -0.71
PDLIM1-201ENST00000329399 CDK2AP2O75956 126 aa10.62□□□□□ -0.71
PDLIM1-201ENST00000329399 ATXN8Q156A1 80 aa10.62□□□□□ -0.71
PDLIM1-201ENST00000329399 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.61□□□□□ -0.71
PDLIM1-201ENST00000329399 F8W1H4 67 aa10.61□□□□□ -0.71
PDLIM1-201ENST00000329399 XGP55808 180 aa10.61□□□□□ -0.71
PDLIM1-201ENST00000329399 LINC01620Q4KN68 170 aa10.61□□□□□ -0.71
PDLIM1-201ENST00000329399 IGLV5-52A0A0A0MRZ9 124 aa10.61□□□□□ -0.71
PDLIM1-201ENST00000329399 LOC107984640A0A0U1RRK4 108 aa10.61□□□□□ -0.71
PDLIM1-201ENST00000329399 H0YGX0 51 aa10.61□□□□□ -0.71
PDLIM1-201ENST00000329399 PLA2G2DQ9UNK4 145 aa10.61□□□□□ -0.71
PDLIM1-201ENST00000329399 HAMPP81172 84 aa10.6□□□□□ -0.71
PDLIM1-201ENST00000329399 OR13C6PQ8NH95 151 aa10.6□□□□□ -0.71
PDLIM1-201ENST00000329399 FAM30AQ9NZY2 134 aa10.6□□□□□ -0.71
PDLIM1-201ENST00000329399 S100A7L2Q5SY68 101 aa10.58□□□□□ -0.72
PDLIM1-201ENST00000329399 Q6ZRP5 223 aa10.58□□□□□ -0.72
PDLIM1-201ENST00000329399 H3BMG7 143 aa10.57□□□□□ -0.72
PDLIM1-201ENST00000329399 TCL1BO95988 128 aa10.57□□□□□ -0.72
PDLIM1-201ENST00000329399 SLPIP03973 132 aa10.57□□□□□ -0.72
PDLIM1-201ENST00000329399 M0R378 163 aa10.56□□□□□ -0.72
PDLIM1-201ENST00000329399 SMIM11BQ8TCY0 68 aa10.56□□□□□ -0.72
PDLIM1-201ENST00000329399 M0QXV9 152 aa10.55□□□□□ -0.72
PDLIM1-201ENST00000329399 VPS13BQ7Z7G8 4022 aa10.55□□□□□ -0.72
PDLIM1-201ENST00000329399 LST1O00453 97 aa10.55□□□□□ -0.72
PDLIM1-201ENST00000329399 SNCGO76070 127 aa10.55□□□□□ -0.72
PDLIM1-201ENST00000329399 IGLV6-57P01721 117 aa10.55□□□□□ -0.72
PDLIM1-201ENST00000329399 VPREB1P12018 145 aa10.55□□□□□ -0.72
PDLIM1-201ENST00000329399 XAGE1AQ9HD64 81 aa10.55□□□□□ -0.72
PDLIM1-201ENST00000329399 SRRM2Q9UQ35 2752 aaKnown RBP10.54□□□□□ -0.72
PDLIM1-201ENST00000329399 A0A1B0GX51 115 aa10.54□□□□□ -0.72
PDLIM1-201ENST00000329399 RPL18AQ02543 176 aaKnown RBP10.54□□□□□ -0.72
PDLIM1-201ENST00000329399 GAGE2EQ4V326 116 aa10.54□□□□□ -0.72
PDLIM1-201ENST00000329399 GAGE2DQ9UEU5 116 aa10.54□□□□□ -0.72
PDLIM1-201ENST00000329399 IGLV5-37A0A075B6J1 123 aa10.53□□□□□ -0.72
PDLIM1-201ENST00000329399 TRACP01848 142 aa10.53□□□□□ -0.72
PDLIM1-201ENST00000329399 LINC01600Q96MT4 127 aa10.53□□□□□ -0.72
PDLIM1-201ENST00000329399 NCR3O14931 201 aa10.52□□□□□ -0.73
PDLIM1-201ENST00000329399 PRR3P79522 188 aaKnown RBP10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 178.4 ms