RNA–Protein interactions for RNA: ENST00000328642.11

SYNM-201, Transcript of synemin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNM, Length 3,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-201ENST00000328642 FAM236AA0A1B0GUQ0 79 aa11.07□□□□□ -0.64
SYNM-201ENST00000328642 FAM236BA0A1B0GV22 79 aa11.07□□□□□ -0.64
SYNM-201ENST00000328642 GHRHP01286 108 aa11.07□□□□□ -0.64
SYNM-201ENST00000328642 STAB2Q8WWQ8 2551 aa11.07□□□□□ -0.64
SYNM-201ENST00000328642 F8WEM9 126 aa11.07□□□□□ -0.64
SYNM-201ENST00000328642 SMCPP49901 116 aaPredicted RBP11.07□□□□□ -0.64
SYNM-201ENST00000328642 VWFP04275 2813 aa11.07□□□□□ -0.64
SYNM-201ENST00000328642 ESRGQ1W209 222 aa11.07□□□□□ -0.64
SYNM-201ENST00000328642 Q8NAQ8 132 aa11.07□□□□□ -0.64
SYNM-201ENST00000328642 IGLV5-39A0A0G2JS06 123 aa11.06□□□□□ -0.64
SYNM-201ENST00000328642 SDIM1Q6ZPB5 146 aa11.06□□□□□ -0.64
SYNM-201ENST00000328642 hADV29S1A0JD25 119 aa11.06□□□□□ -0.64
SYNM-201ENST00000328642 COX7BP24311 80 aa11.04□□□□□ -0.64
SYNM-201ENST00000328642 A0A1B0GUV1 79 aa11.03□□□□□ -0.64
SYNM-201ENST00000328642 KRTAP10-11P60412 298 aa11.03□□□□□ -0.64
SYNM-201ENST00000328642 RBM3P98179 157 aaKnown RBP11.03□□□□□ -0.64
SYNM-201ENST00000328642 TRBV10-3A0A0K0K1G6 114 aa11.03□□□□□ -0.64
SYNM-201ENST00000328642 TRACP01848 142 aa11.03□□□□□ -0.64
SYNM-201ENST00000328642 C9orf153Q5TBE3 101 aa11.01□□□□□ -0.65
SYNM-201ENST00000328642 Q6ZRU5 148 aa11□□□□□ -0.65
SYNM-201ENST00000328642 WFDC9Q8NEX5 89 aa10.99□□□□□ -0.65
SYNM-201ENST00000328642 LITAFQ99732 161 aa10.99□□□□□ -0.65
SYNM-201ENST00000328642 TRAV23DV6A0A075B6W5 121 aa10.99□□□□□ -0.65
SYNM-201ENST00000328642 TMEM256-PLSCR3K7ERE1 68 aa10.99□□□□□ -0.65
SYNM-201ENST00000328642 FAM218AQ96MZ4 157 aa10.99□□□□□ -0.65
SYNM-201ENST00000328642 PPDPFQ9H3Y8 114 aa10.99□□□□□ -0.65
SYNM-201ENST00000328642 PDZD2O15018 2839 aa10.98□□□□□ -0.65
SYNM-201ENST00000328642 IGLV5-45A0A087WSX0 123 aa10.97□□□□□ -0.65
SYNM-201ENST00000328642 USP17L23D6RBM5 183 aa10.97□□□□□ -0.65
SYNM-201ENST00000328642 C3orf84H3BNL1 204 aa10.95□□□□□ -0.66
SYNM-201ENST00000328642 PRO0461Q9UI25 63 aa10.95□□□□□ -0.66
SYNM-201ENST00000328642 KLK5Q9Y337 293 aaPredicted RBP10.94□□□□□ -0.66
SYNM-201ENST00000328642 A0A1B0GX51 115 aa10.94□□□□□ -0.66
SYNM-201ENST00000328642 ZNF73O43830 326 aaPredicted RBP10.93□□□□□ -0.66
SYNM-201ENST00000328642 RPL28P46779 137 aaKnown RBP10.93□□□□□ -0.66
SYNM-201ENST00000328642 FAM19A1Q7Z5A9 133 aa10.93□□□□□ -0.66
SYNM-201ENST00000328642 VPS13CQ709C8 3753 aa10.93□□□□□ -0.66
SYNM-201ENST00000328642 JMJD7-PLA2G4BH0Y9G9 81 aa10.93□□□□□ -0.66
SYNM-201ENST00000328642 ENHOQ6UWT2 76 aa10.93□□□□□ -0.66
SYNM-201ENST00000328642 UBE2AP49459 152 aa10.92□□□□□ -0.66
SYNM-201ENST00000328642 IL17DQ8TAD2 202 aa10.92□□□□□ -0.66
SYNM-201ENST00000328642 FAM104AQ969W3 186 aa10.92□□□□□ -0.66
SYNM-201ENST00000328642 ACYP1P07311 99 aa10.91□□□□□ -0.66
SYNM-201ENST00000328642 NREPQ16612 68 aa10.9□□□□□ -0.66
SYNM-201ENST00000328642 C6orf48Q9UBA6 75 aa10.9□□□□□ -0.66
SYNM-201ENST00000328642 CCDC179H3BU77 68 aa10.9□□□□□ -0.67
SYNM-201ENST00000328642 A0A087WVE0 104 aa10.89□□□□□ -0.67
SYNM-201ENST00000328642 LY6G6CO95867 125 aa10.89□□□□□ -0.67
SYNM-201ENST00000328642 LINC00643Q86TS7 51 aa10.88□□□□□ -0.67
SYNM-201ENST00000328642 NDUFV3P56181 108 aaKnown RBP10.88□□□□□ -0.67
SYNM-201ENST00000328642 CCKP06307 115 aa10.88□□□□□ -0.67
SYNM-201ENST00000328642 COX17Q14061 63 aa10.88□□□□□ -0.67
SYNM-201ENST00000328642 Q8N814 137 aa10.88□□□□□ -0.67
SYNM-201ENST00000328642 LRCOL1A6NCL2 159 aa10.87□□□□□ -0.67
SYNM-201ENST00000328642 M0R378 163 aa10.87□□□□□ -0.67
SYNM-201ENST00000328642 FUSP35637 526 aaKnown RBP eCLIP10.86□□□□□ -0.67
SYNM-201ENST00000328642 EGFEM1PQ0D2K5 195 aa10.86□□□□□ -0.67
SYNM-201ENST00000328642 CDIP1Q9H305 208 aa10.86□□□□□ -0.67
SYNM-201ENST00000328642 NDUFC2-KCTD14E9PQ53 114 aa10.85□□□□□ -0.67
SYNM-201ENST00000328642 K7EIL1 84 aa10.83□□□□□ -0.68
SYNM-201ENST00000328642 LINC00588Q9Y4M8 146 aa10.83□□□□□ -0.68
SYNM-201ENST00000328642 TENM3Q9P273 2699 aa10.83□□□□□ -0.68
SYNM-201ENST00000328642 C3orf22Q8N5N4 141 aa10.81□□□□□ -0.68
SYNM-201ENST00000328642 UPK3BQ9BT76 320 aa10.8□□□□□ -0.68
SYNM-201ENST00000328642 LINC00846Q9NV44 126 aa10.79□□□□□ -0.68
SYNM-201ENST00000328642 M0QXV9 152 aa10.78□□□□□ -0.68
SYNM-201ENST00000328642 PRLHP81277 87 aa10.78□□□□□ -0.68
SYNM-201ENST00000328642 HRCT1Q6UXD1 115 aa10.78□□□□□ -0.68
SYNM-201ENST00000328642 MDFIQ99750 246 aa10.78□□□□□ -0.68
SYNM-201ENST00000328642 LINC01556Q5JQF7 62 aa10.77□□□□□ -0.68
SYNM-201ENST00000328642 KIAA0087Q14695 138 aa10.76□□□□□ -0.69
SYNM-201ENST00000328642 CASC10Q5T4H9 136 aa10.75□□□□□ -0.69
SYNM-201ENST00000328642 LOC107984640A0A0U1RRK4 108 aa10.75□□□□□ -0.69
SYNM-201ENST00000328642 FAM168BA1KXE4 195 aa10.75□□□□□ -0.69
SYNM-201ENST00000328642 CDK2AP2O75956 126 aa10.75□□□□□ -0.69
SYNM-201ENST00000328642 LINC00575Q6W349 94 aa10.75□□□□□ -0.69
SYNM-201ENST00000328642 LINC00612Q8N6U2 182 aa10.75□□□□□ -0.69
SYNM-201ENST00000328642 BPY2O14599 106 aa10.75□□□□□ -0.69
SYNM-201ENST00000328642 C20orf197Q8N268 126 aa10.75□□□□□ -0.69
SYNM-201ENST00000328642 DEFB116Q30KQ4 102 aa10.74□□□□□ -0.69
SYNM-201ENST00000328642 CHTF8P0CG12 524 aa10.74□□□□□ -0.69
SYNM-201ENST00000328642 Q6ZRP5 223 aa10.74□□□□□ -0.69
SYNM-201ENST00000328642 NDUFC2O95298 119 aa10.73□□□□□ -0.69
SYNM-201ENST00000328642 C7orf33Q8WU49 177 aa10.73□□□□□ -0.69
SYNM-201ENST00000328642 PKD1L1Q8TDX9 2849 aa10.73□□□□□ -0.69
SYNM-201ENST00000328642 NDUFS5O43920 106 aa10.72□□□□□ -0.69
SYNM-201ENST00000328642 C22orf24Q9Y442 160 aa10.71□□□□□ -0.69
SYNM-201ENST00000328642 Q8N9L7 120 aa10.71□□□□□ -0.69
SYNM-201ENST00000328642 ATOX1O00244 68 aa10.71□□□□□ -0.7
SYNM-201ENST00000328642 C14orf177Q52M58 125 aa10.7□□□□□ -0.7
SYNM-201ENST00000328642 C9orf129Q5T035 196 aaKnown RBP10.7□□□□□ -0.7
SYNM-201ENST00000328642 IGLV9-49A0A0B4J1Y8 123 aa10.7□□□□□ -0.7
SYNM-201ENST00000328642 H0Y9J4 135 aa10.69□□□□□ -0.7
SYNM-201ENST00000328642 LINC00167Q96N53 147 aa10.68□□□□□ -0.7
SYNM-201ENST00000328642 MRPL55Q7Z7F7 128 aaKnown RBP10.68□□□□□ -0.7
SYNM-201ENST00000328642 C2orf48Q96LS8 159 aa10.68□□□□□ -0.7
SYNM-201ENST00000328642 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.67□□□□□ -0.7
SYNM-201ENST00000328642 DNAH10OSP0CZ25 163 aa10.66□□□□□ -0.7
SYNM-201ENST00000328642 SERTAD4-AS1Q5TG53 156 aa10.66□□□□□ -0.7
SYNM-201ENST00000328642 B9D2Q9BPU9 175 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms