RNA–Protein interactions for RNA: ENST00000325110.10

HMGCS1-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS1, Length 3,506 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-201ENST00000325110 Q6ZQY7 126 aa8.82□□□□□ -1
HMGCS1-201ENST00000325110 USP17L23D6RBM5 183 aa8.81□□□□□ -1
HMGCS1-201ENST00000325110 COX7CP15954 63 aa8.81□□□□□ -1
HMGCS1-201ENST00000325110 NSD1Q96L73 2696 aaPredicted RBP8.8□□□□□ -1
HMGCS1-201ENST00000325110 KIAA0087Q14695 138 aa8.8□□□□□ -1
HMGCS1-201ENST00000325110 CAMK2N2Q96S95 79 aa8.8□□□□□ -1
HMGCS1-201ENST00000325110 PDZD2O15018 2839 aa8.8□□□□□ -1
HMGCS1-201ENST00000325110 RBM3P98179 157 aaKnown RBP8.8□□□□□ -1
HMGCS1-201ENST00000325110 FAM19A1Q7Z5A9 133 aa8.8□□□□□ -1
HMGCS1-201ENST00000325110 RETNQ9HD89 108 aa8.8□□□□□ -1
HMGCS1-201ENST00000325110 CCKP06307 115 aa8.79□□□□□ -1
HMGCS1-201ENST00000325110 OTOGQ6ZRI0 2925 aa8.79□□□□□ -1
HMGCS1-201ENST00000325110 STAB1Q9NY15 2570 aa8.79□□□□□ -1
HMGCS1-201ENST00000325110 NANOS2P60321 138 aaKnown RBP8.79□□□□□ -1
HMGCS1-201ENST00000325110 Q6JHZ5 121 aa8.79□□□□□ -1
HMGCS1-201ENST00000325110 DSCR8Q96T75 97 aa8.79□□□□□ -1
HMGCS1-201ENST00000325110 IGHV4-30-4P0DP06 118 aa8.78□□□□□ -1
HMGCS1-201ENST00000325110 SCXQ7RTU7 201 aa8.78□□□□□ -1
HMGCS1-201ENST00000325110 Q8NDZ9 215 aa8.78□□□□□ -1
HMGCS1-201ENST00000325110 GHRHP01286 108 aa8.77□□□□□ -1
HMGCS1-201ENST00000325110 TRBV10-3A0A0K0K1G6 114 aa8.77□□□□□ -1.01
HMGCS1-201ENST00000325110 LOC107984640A0A0U1RRK4 108 aa8.77□□□□□ -1.01
HMGCS1-201ENST00000325110 COX17Q14061 63 aa8.77□□□□□ -1.01
HMGCS1-201ENST00000325110 LELP1Q5T871 98 aa8.77□□□□□ -1.01
HMGCS1-201ENST00000325110 LINC00612Q8N6U2 182 aa8.76□□□□□ -1.01
HMGCS1-201ENST00000325110 IGKV2D-24A0A075B6R9 120 aa8.76□□□□□ -1.01
HMGCS1-201ENST00000325110 OXLD1Q5BKU9 147 aa8.76□□□□□ -1.01
HMGCS1-201ENST00000325110 MIFP14174 115 aa8.76□□□□□ -1.01
HMGCS1-201ENST00000325110 WFDC10BQ8IUB3 73 aa8.75□□□□□ -1.01
HMGCS1-201ENST00000325110 DIRC1Q969H9 104 aa8.75□□□□□ -1.01
HMGCS1-201ENST00000325110 NDUFC2O95298 119 aa8.75□□□□□ -1.01
HMGCS1-201ENST00000325110 UPK3BQ9BT76 320 aa8.75□□□□□ -1.01
HMGCS1-201ENST00000325110 PPDPFQ9H3Y8 114 aa8.75□□□□□ -1.01
HMGCS1-201ENST00000325110 LINC00575Q6W349 94 aa8.74□□□□□ -1.01
HMGCS1-201ENST00000325110 LINC01561Q8N1V8 128 aa8.74□□□□□ -1.01
HMGCS1-201ENST00000325110 SERP2Q8N6R1 65 aa8.74□□□□□ -1.01
HMGCS1-201ENST00000325110 Q8NAQ8 132 aa8.74□□□□□ -1.01
HMGCS1-201ENST00000325110 DEFB105AQ8NG35 78 aa8.74□□□□□ -1.01
HMGCS1-201ENST00000325110 C20orf197Q8N268 126 aa8.73□□□□□ -1.01
HMGCS1-201ENST00000325110 KPRPQ5T749 579 aaPredicted RBP8.72□□□□□ -1.01
HMGCS1-201ENST00000325110 C6orf48Q9UBA6 75 aa8.71□□□□□ -1.01
HMGCS1-201ENST00000325110 M0R2N4 97 aa8.71□□□□□ -1.02
HMGCS1-201ENST00000325110 C1orf43Q9BWL3 253 aa8.71□□□□□ -1.02
HMGCS1-201ENST00000325110 NBEAL1Q6ZS30 2694 aa8.71□□□□□ -1.02
HMGCS1-201ENST00000325110 PKD1L1Q8TDX9 2849 aa8.71□□□□□ -1.02
HMGCS1-201ENST00000325110 COX7BP24311 80 aa8.71□□□□□ -1.02
HMGCS1-201ENST00000325110 LYPD5Q6UWN5 251 aa8.71□□□□□ -1.02
HMGCS1-201ENST00000325110 Q6ZTC4 211 aa8.71□□□□□ -1.02
HMGCS1-201ENST00000325110 ZNF73O43830 326 aaPredicted RBP8.7□□□□□ -1.02
HMGCS1-201ENST00000325110 CYSTM1Q9H1C7 97 aa8.7□□□□□ -1.02
HMGCS1-201ENST00000325110 BAHCC1Q9P281 2608 aa8.69□□□□□ -1.02
HMGCS1-201ENST00000325110 OBSCN-AS1Q96MR7 158 aa8.69□□□□□ -1.02
HMGCS1-201ENST00000325110 TRRAPQ9Y4A5 3859 aa8.67□□□□□ -1.02
HMGCS1-201ENST00000325110 Q6ZRU5 148 aa8.67□□□□□ -1.02
HMGCS1-201ENST00000325110 J3KT08 172 aa8.67□□□□□ -1.02
HMGCS1-201ENST00000325110 C2orf48Q96LS8 159 aa8.67□□□□□ -1.02
HMGCS1-201ENST00000325110 COL6A5A8TX70 2615 aa8.67□□□□□ -1.02
HMGCS1-201ENST00000325110 NKAPP1Q8N9T2 125 aa8.66□□□□□ -1.02
HMGCS1-201ENST00000325110 CRYGAP11844 174 aa8.65□□□□□ -1.02
HMGCS1-201ENST00000325110 Q6ZVQ6 151 aa8.65□□□□□ -1.02
HMGCS1-201ENST00000325110 ANK3Q12955 4377 aaKnown RBP8.65□□□□□ -1.03
HMGCS1-201ENST00000325110 Q6ZQT0 140 aa8.64□□□□□ -1.03
HMGCS1-201ENST00000325110 A0A0J9YWU9 116 aa8.64□□□□□ -1.03
HMGCS1-201ENST00000325110 SNURFQ9Y675 71 aa8.64□□□□□ -1.03
HMGCS1-201ENST00000325110 PRB2P02812 416 aaPredicted RBP8.64□□□□□ -1.03
HMGCS1-201ENST00000325110 ATP5EP2Q5VTU8 51 aa8.64□□□□□ -1.03
HMGCS1-201ENST00000325110 TENM3Q9P273 2699 aa8.64□□□□□ -1.03
HMGCS1-201ENST00000325110 C3orf84H3BNL1 204 aa8.63□□□□□ -1.03
HMGCS1-201ENST00000325110 LINC01547P58512 204 aaPredicted RBP8.63□□□□□ -1.03
HMGCS1-201ENST00000325110 MGAM2Q2M2H8 2515 aa8.63□□□□□ -1.03
HMGCS1-201ENST00000325110 IGLV6-57P01721 117 aa8.63□□□□□ -1.03
HMGCS1-201ENST00000325110 MRAPQ8TCY5 172 aa8.63□□□□□ -1.03
HMGCS1-201ENST00000325110 MUC7Q8TAX7 377 aa8.62□□□□□ -1.03
HMGCS1-201ENST00000325110 LINC00167Q96N53 147 aa8.62□□□□□ -1.03
HMGCS1-201ENST00000325110 DEFB131BA0A096LNP1 70 aa8.62□□□□□ -1.03
HMGCS1-201ENST00000325110 Q8N9L7 120 aa8.62□□□□□ -1.03
HMGCS1-201ENST00000325110 PRR34Q9NV39 138 aa8.62□□□□□ -1.03
HMGCS1-201ENST00000325110 RPL37AP8A6NKH3 93 aa8.61□□□□□ -1.03
HMGCS1-201ENST00000325110 ESRGQ1W209 222 aa8.61□□□□□ -1.03
HMGCS1-201ENST00000325110 FAM19A5Q7Z5A7 132 aaPredicted RBP8.6□□□□□ -1.03
HMGCS1-201ENST00000325110 FBN1P35555 2871 aaKnown RBP8.6□□□□□ -1.03
HMGCS1-201ENST00000325110 M0R378 163 aa8.59□□□□□ -1.03
HMGCS1-201ENST00000325110 SYCNQ0VAF6 134 aa8.59□□□□□ -1.03
HMGCS1-201ENST00000325110 SVIPQ8NHG7 77 aa8.59□□□□□ -1.03
HMGCS1-201ENST00000325110 TMEM258P61165 79 aa8.59□□□□□ -1.03
HMGCS1-201ENST00000325110 EGFEM1PQ0D2K5 195 aa8.59□□□□□ -1.03
HMGCS1-201ENST00000325110 C11orf45Q8TAV5 145 aa8.59□□□□□ -1.03
HMGCS1-201ENST00000325110 TRAV10A0A0B4J240 114 aa8.58□□□□□ -1.04
HMGCS1-201ENST00000325110 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.58□□□□□ -1.04
HMGCS1-201ENST00000325110 NDUFC2-KCTD14E9PQ53 114 aa8.58□□□□□ -1.04
HMGCS1-201ENST00000325110 VPREB1P12018 145 aa8.57□□□□□ -1.04
HMGCS1-201ENST00000325110 NREPQ16612 68 aa8.57□□□□□ -1.04
HMGCS1-201ENST00000325110 PDE6GP18545 87 aa8.57□□□□□ -1.04
HMGCS1-201ENST00000325110 Q6ZRP5 223 aa8.57□□□□□ -1.04
HMGCS1-201ENST00000325110 ELOF1P60002 83 aaKnown RBP8.55□□□□□ -1.04
HMGCS1-201ENST00000325110 C15orf56Q8N910 161 aa8.54□□□□□ -1.04
HMGCS1-201ENST00000325110 LOC110117498A0A087WWA1 95 aa8.54□□□□□ -1.04
HMGCS1-201ENST00000325110 RMI2Q96E14 147 aa8.54□□□□□ -1.04
HMGCS1-201ENST00000325110 DPH3Q96FX2 82 aa8.54□□□□□ -1.04
HMGCS1-201ENST00000325110 ETDCA0A1B0GVM5 59 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms