RNA–Protein interactions for RNA: ENST00000324266.9

TRAPPC12-201, Transcript of trafficking protein particle complex 12, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRAPPC12, Length 2,508 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-201ENST00000324266 C11orf68Q9H3H3 251 aaKnown RBP12.57□□□□□ -0.4
TRAPPC12-201ENST00000324266 IGHV3OR16-9A0A0B4J2B5 98 aa12.56□□□□□ -0.4
TRAPPC12-201ENST00000324266 ORMDL1Q9P0S3 153 aa12.56□□□□□ -0.4
TRAPPC12-201ENST00000324266 TRBV6-8A0A0A6YYG3 113 aa12.56□□□□□ -0.4
TRAPPC12-201ENST00000324266 PRR15Q8IV56 129 aa12.56□□□□□ -0.4
TRAPPC12-201ENST00000324266 UBL5Q9BZL1 73 aa12.56□□□□□ -0.4
TRAPPC12-201ENST00000324266 HIVEP2P31629 2446 aa12.56□□□□□ -0.4
TRAPPC12-201ENST00000324266 CSNK1G2-AS1Q8NCQ2 148 aa12.55□□□□□ -0.4
TRAPPC12-201ENST00000324266 C19orf73Q9NVV2 129 aa12.55□□□□□ -0.4
TRAPPC12-201ENST00000324266 TRAV10A0A0B4J240 114 aa12.54□□□□□ -0.4
TRAPPC12-201ENST00000324266 RETNQ9HD89 108 aa12.54□□□□□ -0.4
TRAPPC12-201ENST00000324266 Q6ZRU5 148 aa12.52□□□□□ -0.4
TRAPPC12-201ENST00000324266 IBA57-AS1B1ANH7 110 aa12.52□□□□□ -0.41
TRAPPC12-201ENST00000324266 LY6G6DO95868 133 aa12.52□□□□□ -0.41
TRAPPC12-201ENST00000324266 DEFB130BP0DP73 79 aa12.52□□□□□ -0.41
TRAPPC12-201ENST00000324266 DEFB130AP0DP74 79 aa12.52□□□□□ -0.41
TRAPPC12-201ENST00000324266 A0A087WZ39 114 aa12.51□□□□□ -0.41
TRAPPC12-201ENST00000324266 PAX4O43316 350 aa12.51□□□□□ -0.41
TRAPPC12-201ENST00000324266 LINC01006Q8NI28 216 aa12.51□□□□□ -0.41
TRAPPC12-201ENST00000324266 JMJD7-PLA2G4BH0Y9G9 81 aa12.51□□□□□ -0.41
TRAPPC12-201ENST00000324266 NBEAL2Q6ZNJ1 2754 aa12.51□□□□□ -0.41
TRAPPC12-201ENST00000324266 IGLV1-51P01701 117 aa12.5□□□□□ -0.41
TRAPPC12-201ENST00000324266 CD164Q04900 197 aa12.49□□□□□ -0.41
TRAPPC12-201ENST00000324266 LINC00959A0A1B0GUT2 108 aa12.49□□□□□ -0.41
TRAPPC12-201ENST00000324266 MIFP14174 115 aa12.49□□□□□ -0.41
TRAPPC12-201ENST00000324266 CLPSL2Q6UWE3 100 aa12.49□□□□□ -0.41
TRAPPC12-201ENST00000324266 CMC4P56277 68 aaPredicted RBP12.48□□□□□ -0.41
TRAPPC12-201ENST00000324266 NSD1Q96L73 2696 aaPredicted RBP12.47□□□□□ -0.41
TRAPPC12-201ENST00000324266 TRBV7-4A0A0J9YYF1 115 aa12.46□□□□□ -0.41
TRAPPC12-201ENST00000324266 A0A096LPF7 62 aa12.46□□□□□ -0.42
TRAPPC12-201ENST00000324266 LAMTOR3Q9UHA4 124 aa12.45□□□□□ -0.42
TRAPPC12-201ENST00000324266 ESRGQ1W209 222 aa12.45□□□□□ -0.42
TRAPPC12-201ENST00000324266 GYPEP15421 78 aa12.44□□□□□ -0.42
TRAPPC12-201ENST00000324266 TM2D3Q9BRN9 247 aa12.43□□□□□ -0.42
TRAPPC12-201ENST00000324266 F8P00451 2351 aa12.43□□□□□ -0.42
TRAPPC12-201ENST00000324266 PRR3P79522 188 aaKnown RBP12.43□□□□□ -0.42
TRAPPC12-201ENST00000324266 INAFM1C9JVW0 142 aa12.42□□□□□ -0.42
TRAPPC12-201ENST00000324266 LINC01547P58512 204 aaPredicted RBP12.42□□□□□ -0.42
TRAPPC12-201ENST00000324266 LINC00167Q96N53 147 aa12.42□□□□□ -0.42
TRAPPC12-201ENST00000324266 CYSRT1A8MQ03 144 aa12.42□□□□□ -0.42
TRAPPC12-201ENST00000324266 TMEM256-PLSCR3K7ERE1 68 aa12.38□□□□□ -0.43
TRAPPC12-201ENST00000324266 HAMPP81172 84 aa12.38□□□□□ -0.43
TRAPPC12-201ENST00000324266 TMEM254Q8TBM7 123 aa12.38□□□□□ -0.43
TRAPPC12-201ENST00000324266 RNASE1P07998 156 aaKnown RBP12.38□□□□□ -0.43
TRAPPC12-201ENST00000324266 Q8N3U1 123 aa12.37□□□□□ -0.43
TRAPPC12-201ENST00000324266 Q8IZM0 81 aa12.36□□□□□ -0.43
TRAPPC12-201ENST00000324266 TEP1Q99973 2627 aaKnown RBP12.36□□□□□ -0.43
TRAPPC12-201ENST00000324266 IGLV10-54A0A075B6I4 117 aa12.35□□□□□ -0.43
TRAPPC12-201ENST00000324266 DAD1P61803 113 aa12.35□□□□□ -0.43
TRAPPC12-201ENST00000324266 NANOS2P60321 138 aaKnown RBP12.35□□□□□ -0.43
TRAPPC12-201ENST00000324266 NREPQ16612 68 aa12.35□□□□□ -0.43
TRAPPC12-201ENST00000324266 Q6ZVQ6 151 aa12.35□□□□□ -0.43
TRAPPC12-201ENST00000324266 A0A1B0GUV1 79 aa12.34□□□□□ -0.43
TRAPPC12-201ENST00000324266 LINC00269Q8N2A0 174 aa12.34□□□□□ -0.43
TRAPPC12-201ENST00000324266 C9orf116Q5BN46 136 aaPredicted RBP12.34□□□□□ -0.43
TRAPPC12-201ENST00000324266 Q6ZQT0 140 aa12.34□□□□□ -0.43
TRAPPC12-201ENST00000324266 Q8N814 137 aa12.34□□□□□ -0.43
TRAPPC12-201ENST00000324266 DEFB4AO15263 64 aa12.33□□□□□ -0.44
TRAPPC12-201ENST00000324266 FUSP35637 526 aaKnown RBP eCLIP12.33□□□□□ -0.44
TRAPPC12-201ENST00000324266 CXCL6P80162 114 aa12.33□□□□□ -0.44
TRAPPC12-201ENST00000324266 LINC00612Q8N6U2 182 aa12.33□□□□□ -0.44
TRAPPC12-201ENST00000324266 X6R8D5 127 aa12.33□□□□□ -0.44
TRAPPC12-201ENST00000324266 VWFP04275 2813 aa12.33□□□□□ -0.44
TRAPPC12-201ENST00000324266 ZNF561-AS1K7EIQ3 104 aa12.32□□□□□ -0.44
TRAPPC12-201ENST00000324266 ERC2-IT1O76042 136 aa12.32□□□□□ -0.44
TRAPPC12-201ENST00000324266 Q6ZTC4 211 aa12.32□□□□□ -0.44
TRAPPC12-201ENST00000324266 C6orf223Q8N319 242 aa12.32□□□□□ -0.44
TRAPPC12-201ENST00000324266 PRO0255Q9UI72 69 aa12.32□□□□□ -0.44
TRAPPC12-201ENST00000324266 PRYO14603 147 aa12.31□□□□□ -0.44
TRAPPC12-201ENST00000324266 KIAA0087Q14695 138 aa12.31□□□□□ -0.44
TRAPPC12-201ENST00000324266 KRTAP10-3P60369 221 aa12.3□□□□□ -0.44
TRAPPC12-201ENST00000324266 Q8NDZ9 215 aa12.3□□□□□ -0.44
TRAPPC12-201ENST00000324266 MAST4O15021 2626 aa12.3□□□□□ -0.44
TRAPPC12-201ENST00000324266 M0R2N4 97 aa12.29□□□□□ -0.44
TRAPPC12-201ENST00000324266 CHCHD10Q8WYQ3 142 aaPredicted RBP12.29□□□□□ -0.44
TRAPPC12-201ENST00000324266 ANGP03950 147 aaKnown RBP12.28□□□□□ -0.44
TRAPPC12-201ENST00000324266 MRPL55Q7Z7F7 128 aaKnown RBP12.28□□□□□ -0.44
TRAPPC12-201ENST00000324266 LOC110117498A0A087WWA1 95 aa12.27□□□□□ -0.45
TRAPPC12-201ENST00000324266 CD164L2Q6UWJ8 174 aa12.27□□□□□ -0.45
TRAPPC12-201ENST00000324266 SPATA3Q8NHX4 192 aa12.27□□□□□ -0.45
TRAPPC12-201ENST00000324266 Q1T7F1 81 aa12.27□□□□□ -0.45
TRAPPC12-201ENST00000324266 REG3AQ06141 175 aa12.25□□□□□ -0.45
TRAPPC12-201ENST00000324266 C6orf99Q4VX62 202 aa12.25□□□□□ -0.45
TRAPPC12-201ENST00000324266 Q6ZRP5 223 aa12.25□□□□□ -0.45
TRAPPC12-201ENST00000324266 BPY2O14599 106 aa12.24□□□□□ -0.45
TRAPPC12-201ENST00000324266 DEFB135Q30KP9 77 aa12.24□□□□□ -0.45
TRAPPC12-201ENST00000324266 hDV103S1A0JD37 113 aa12.22□□□□□ -0.45
TRAPPC12-201ENST00000324266 COX17Q14061 63 aa12.22□□□□□ -0.45
TRAPPC12-201ENST00000324266 C10orf25Q5T742 122 aa12.22□□□□□ -0.45
TRAPPC12-201ENST00000324266 SCXQ7RTU7 201 aa12.21□□□□□ -0.45
TRAPPC12-201ENST00000324266 UNQ6190/PRO20217Q6UXQ8 127 aa12.2□□□□□ -0.46
TRAPPC12-201ENST00000324266 TENM1Q9UKZ4 2725 aa12.2□□□□□ -0.46
TRAPPC12-201ENST00000324266 IGHV4-28A0A0C4DH34 117 aa12.19□□□□□ -0.46
TRAPPC12-201ENST00000324266 ATRQ13535 2644 aa12.18□□□□□ -0.46
TRAPPC12-201ENST00000324266 LRCOL1A6NCL2 159 aa12.18□□□□□ -0.46
TRAPPC12-201ENST00000324266 LYRM9A8MSI8 78 aa12.18□□□□□ -0.46
TRAPPC12-201ENST00000324266 RBM12B-AS1Q9P1G2 102 aa12.18□□□□□ -0.46
TRAPPC12-201ENST00000324266 PSPHP1O15172 72 aa12.17□□□□□ -0.46
TRAPPC12-201ENST00000324266 CELA1Q9UNI1 258 aa12.17□□□□□ -0.46
TRAPPC12-201ENST00000324266 HTN3P15516 51 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 95.9 ms