RNA–Protein interactions for RNA: ENST00000323055.10

PPP3CA-201, Transcript of protein phosphatase 3 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP3CA, Length 4,519 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP3CA-201ENST00000323055 BPY2O14599 106 aa11.78□□□□□ -0.52
PPP3CA-201ENST00000323055 NDUFS5O43920 106 aa11.78□□□□□ -0.52
PPP3CA-201ENST00000323055 Q6ZRU5 148 aa11.78□□□□□ -0.52
PPP3CA-201ENST00000323055 C19orf73Q9NVV2 129 aa11.78□□□□□ -0.52
PPP3CA-201ENST00000323055 LOC107984640A0A0U1RRK4 108 aa11.77□□□□□ -0.52
PPP3CA-201ENST00000323055 MUC3AQ02505 3323 aa11.77□□□□□ -0.53
PPP3CA-201ENST00000323055 MUC7Q8TAX7 377 aa11.77□□□□□ -0.53
PPP3CA-201ENST00000323055 WFDC9Q8NEX5 89 aa11.76□□□□□ -0.53
PPP3CA-201ENST00000323055 LY6G6CO95867 125 aa11.76□□□□□ -0.53
PPP3CA-201ENST00000323055 Q8N814 137 aa11.76□□□□□ -0.53
PPP3CA-201ENST00000323055 ITPR2Q14571 2701 aa11.75□□□□□ -0.53
PPP3CA-201ENST00000323055 NDUFC2-KCTD14E9PQ53 114 aa11.75□□□□□ -0.53
PPP3CA-201ENST00000323055 C10orf25Q5T742 122 aa11.73□□□□□ -0.53
PPP3CA-201ENST00000323055 LRCOL1A6NCL2 159 aa11.72□□□□□ -0.53
PPP3CA-201ENST00000323055 NDUFB1O75438 58 aa11.71□□□□□ -0.54
PPP3CA-201ENST00000323055 NDUFC2O95298 119 aa11.7□□□□□ -0.54
PPP3CA-201ENST00000323055 SMCPP49901 116 aaPredicted RBP11.7□□□□□ -0.54
PPP3CA-201ENST00000323055 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.7□□□□□ -0.54
PPP3CA-201ENST00000323055 PLAC8L1A1L4L8 177 aa11.69□□□□□ -0.54
PPP3CA-201ENST00000323055 H0Y9J4 135 aa11.69□□□□□ -0.54
PPP3CA-201ENST00000323055 LINC01561Q8N1V8 128 aa11.69□□□□□ -0.54
PPP3CA-201ENST00000323055 ZANQ9Y493 2812 aa11.69□□□□□ -0.54
PPP3CA-201ENST00000323055 DHRS4-AS1Q9P1J3 65 aa11.69□□□□□ -0.54
PPP3CA-201ENST00000323055 M0QXV9 152 aa11.69□□□□□ -0.54
PPP3CA-201ENST00000323055 CR1P17927 2039 aa11.68□□□□□ -0.54
PPP3CA-201ENST00000323055 NBEAL1Q6ZS30 2694 aa11.67□□□□□ -0.54
PPP3CA-201ENST00000323055 C2orf48Q96LS8 159 aa11.67□□□□□ -0.54
PPP3CA-201ENST00000323055 NUPR2A6NF83 97 aa11.67□□□□□ -0.54
PPP3CA-201ENST00000323055 EIF4EBP3O60516 100 aaPredicted RBP11.67□□□□□ -0.54
PPP3CA-201ENST00000323055 C20orf197Q8N268 126 aa11.67□□□□□ -0.54
PPP3CA-201ENST00000323055 LINC01556Q5JQF7 62 aa11.66□□□□□ -0.54
PPP3CA-201ENST00000323055 UTP20O75691 2785 aaKnown RBP11.66□□□□□ -0.54
PPP3CA-201ENST00000323055 LITAFQ99732 161 aa11.66□□□□□ -0.54
PPP3CA-201ENST00000323055 SMIM20Q8N5G0 67 aa11.66□□□□□ -0.54
PPP3CA-201ENST00000323055 C6orf48Q9UBA6 75 aa11.65□□□□□ -0.54
PPP3CA-201ENST00000323055 SPATA3Q8NHX4 192 aa11.65□□□□□ -0.55
PPP3CA-201ENST00000323055 PRO0461Q9UI25 63 aa11.64□□□□□ -0.55
PPP3CA-201ENST00000323055 FAM218AQ96MZ4 157 aa11.63□□□□□ -0.55
PPP3CA-201ENST00000323055 FAM240AA0A1B0GVK7 77 aa11.63□□□□□ -0.55
PPP3CA-201ENST00000323055 ATP5EP2Q5VTU8 51 aa11.62□□□□□ -0.55
PPP3CA-201ENST00000323055 KRTAP10-11P60412 298 aa11.62□□□□□ -0.55
PPP3CA-201ENST00000323055 WDFY3Q8IZQ1 3526 aa11.62□□□□□ -0.55
PPP3CA-201ENST00000323055 LINC00575Q6W349 94 aa11.61□□□□□ -0.55
PPP3CA-201ENST00000323055 A0A087WVE0 104 aa11.61□□□□□ -0.55
PPP3CA-201ENST00000323055 MP68P56378 58 aa11.59□□□□□ -0.55
PPP3CA-201ENST00000323055 H3BNG1 76 aa11.59□□□□□ -0.55
PPP3CA-201ENST00000323055 IMUPQ9GZP8 106 aa11.59□□□□□ -0.55
PPP3CA-201ENST00000323055 UQCRQO14949 82 aa11.58□□□□□ -0.56
PPP3CA-201ENST00000323055 C4orf48Q5BLP8 95 aa11.58□□□□□ -0.56
PPP3CA-201ENST00000323055 MRPL55Q7Z7F7 128 aaKnown RBP11.58□□□□□ -0.56
PPP3CA-201ENST00000323055 HRCT1Q6UXD1 115 aa11.57□□□□□ -0.56
PPP3CA-201ENST00000323055 BAHCC1Q9P281 2608 aa11.57□□□□□ -0.56
PPP3CA-201ENST00000323055 REG3GQ6UW15 175 aa11.57□□□□□ -0.56
PPP3CA-201ENST00000323055 CDIP1Q9H305 208 aa11.57□□□□□ -0.56
PPP3CA-201ENST00000323055 IGLV9-49A0A0B4J1Y8 123 aa11.56□□□□□ -0.56
PPP3CA-201ENST00000323055 LINC00588Q9Y4M8 146 aa11.56□□□□□ -0.56
PPP3CA-201ENST00000323055 LINC00846Q9NV44 126 aa11.56□□□□□ -0.56
PPP3CA-201ENST00000323055 ASH1LQ9NR48 2969 aaKnown RBP11.55□□□□□ -0.56
PPP3CA-201ENST00000323055 C1orf137Q5JT78 98 aa11.55□□□□□ -0.56
PPP3CA-201ENST00000323055 CCDC179H3BU77 68 aa11.54□□□□□ -0.56
PPP3CA-201ENST00000323055 LINC00474Q9P2X8 69 aa11.54□□□□□ -0.56
PPP3CA-201ENST00000323055 C22orf24Q9Y442 160 aa11.54□□□□□ -0.56
PPP3CA-201ENST00000323055 PRLHP81277 87 aa11.54□□□□□ -0.56
PPP3CA-201ENST00000323055 Q6JHZ5 121 aa11.54□□□□□ -0.56
PPP3CA-201ENST00000323055 C7orf33Q8WU49 177 aa11.54□□□□□ -0.56
PPP3CA-201ENST00000323055 SPINK6Q6UWN8 80 aa11.52□□□□□ -0.57
PPP3CA-201ENST00000323055 MDFIQ99750 246 aa11.52□□□□□ -0.57
PPP3CA-201ENST00000323055 NSD1Q96L73 2696 aaPredicted RBP11.52□□□□□ -0.57
PPP3CA-201ENST00000323055 WFDC13Q8IUB5 93 aa11.52□□□□□ -0.57
PPP3CA-201ENST00000323055 C3orf22Q8N5N4 141 aa11.52□□□□□ -0.57
PPP3CA-201ENST00000323055 DCHS1Q96JQ0 3298 aa11.51□□□□□ -0.57
PPP3CA-201ENST00000323055 F8WDY8 70 aa11.51□□□□□ -0.57
PPP3CA-201ENST00000323055 LINC00612Q8N6U2 182 aa11.5□□□□□ -0.57
PPP3CA-201ENST00000323055 CRYBG3Q68DQ2 2970 aa11.5□□□□□ -0.57
PPP3CA-201ENST00000323055 K7EIL1 84 aa11.49□□□□□ -0.57
PPP3CA-201ENST00000323055 SERP2Q8N6R1 65 aa11.49□□□□□ -0.57
PPP3CA-201ENST00000323055 ASPMQ8IZT6 3477 aa11.49□□□□□ -0.57
PPP3CA-201ENST00000323055 APCP25054 2843 aa11.49□□□□□ -0.57
PPP3CA-201ENST00000323055 NHLRC4P0CG21 123 aaPredicted RBP11.48□□□□□ -0.57
PPP3CA-201ENST00000323055 LINC00167Q96N53 147 aa11.48□□□□□ -0.57
PPP3CA-201ENST00000323055 Q6Q795 121 aa11.47□□□□□ -0.57
PPP3CA-201ENST00000323055 SNURFQ9Y675 71 aa11.47□□□□□ -0.57
PPP3CA-201ENST00000323055 RELNP78509 3460 aa11.47□□□□□ -0.57
PPP3CA-201ENST00000323055 IGLV5-52A0A0A0MRZ9 124 aa11.47□□□□□ -0.57
PPP3CA-201ENST00000323055 PRYO14603 147 aa11.46□□□□□ -0.57
PPP3CA-201ENST00000323055 FAM19A3Q7Z5A8 133 aa11.46□□□□□ -0.57
PPP3CA-201ENST00000323055 LAMA5O15230 3695 aa11.46□□□□□ -0.57
PPP3CA-201ENST00000323055 HRNRQ86YZ3 2850 aaPredicted RBP11.45□□□□□ -0.58
PPP3CA-201ENST00000323055 DMDP11532 3685 aa11.45□□□□□ -0.58
PPP3CA-201ENST00000323055 KIAA0087Q14695 138 aa11.44□□□□□ -0.58
PPP3CA-201ENST00000323055 COX7CP15954 63 aa11.44□□□□□ -0.58
PPP3CA-201ENST00000323055 C1orf134Q5TEV5 83 aa11.44□□□□□ -0.58
PPP3CA-201ENST00000323055 Q6ZRP5 223 aa11.44□□□□□ -0.58
PPP3CA-201ENST00000323055 Q6ZVQ6 151 aa11.43□□□□□ -0.58
PPP3CA-201ENST00000323055 J3KT08 172 aa11.42□□□□□ -0.58
PPP3CA-201ENST00000323055 NF1P21359 2839 aa11.42□□□□□ -0.58
PPP3CA-201ENST00000323055 IGKV4-1P06312 121 aa11.42□□□□□ -0.58
PPP3CA-201ENST00000323055 PRR34Q9NV39 138 aa11.42□□□□□ -0.58
PPP3CA-201ENST00000323055 CELSR2Q9HCU4 2923 aa11.42□□□□□ -0.58
PPP3CA-201ENST00000323055 DNAH10OSP0CZ25 163 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms