RNA–Protein interactions for RNA: ENST00000309190.9

CAST-201, Transcript of calpastatin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CAST, Length 4,282 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-201ENST00000309190 LGALS3P17931 250 aaKnown RBP3.35□□□□□ -1.87
CAST-201ENST00000309190 UNQ6190/PRO20217Q6UXQ8 127 aa3.35□□□□□ -1.87
CAST-201ENST00000309190 A0A096LNI7 61 aa3.35□□□□□ -1.87
CAST-201ENST00000309190 PMVKQ15126 192 aa3.35□□□□□ -1.87
CAST-201ENST00000309190 SS18Q15532 418 aa3.35□□□□□ -1.87
CAST-201ENST00000309190 H7C423 109 aa3.34□□□□□ -1.87
CAST-201ENST00000309190 WWC2-AS2Q96NR7 200 aa3.34□□□□□ -1.87
CAST-201ENST00000309190 TIMM17BO60830 172 aa3.34□□□□□ -1.87
CAST-201ENST00000309190 C4orf26Q17RF5 130 aa3.34□□□□□ -1.87
CAST-201ENST00000309190 HIST1H4GQ99525 98 aa3.34□□□□□ -1.87
CAST-201ENST00000309190 TIMM21Q9BVV7 248 aa3.34□□□□□ -1.87
CAST-201ENST00000309190 A0A0J9YXY3 114 aa3.34□□□□□ -1.88
CAST-201ENST00000309190 C2orf48Q96LS8 159 aa3.34□□□□□ -1.88
CAST-201ENST00000309190 CAMK2N2Q96S95 79 aa3.34□□□□□ -1.88
CAST-201ENST00000309190 C10orf25Q5T742 122 aa3.33□□□□□ -1.88
CAST-201ENST00000309190 Q6ZVQ6 151 aa3.33□□□□□ -1.88
CAST-201ENST00000309190 UBE2D4Q9Y2X8 147 aa3.33□□□□□ -1.88
CAST-201ENST00000309190 RPL37AP8A6NKH3 93 aa3.33□□□□□ -1.88
CAST-201ENST00000309190 IFITM1P13164 125 aa3.33□□□□□ -1.88
CAST-201ENST00000309190 PRO1854Q9UHT4 67 aa3.33□□□□□ -1.88
CAST-201ENST00000309190 DNAH7Q8WXX0 4024 aa3.33□□□□□ -1.88
CAST-201ENST00000309190 IGKV2-28A0A075B6P5 120 aa3.33□□□□□ -1.88
CAST-201ENST00000309190 A0A087WZ39 114 aa3.33□□□□□ -1.88
CAST-201ENST00000309190 LINC00959A0A1B0GUT2 108 aa3.33□□□□□ -1.88
CAST-201ENST00000309190 LST1O00453 97 aa3.33□□□□□ -1.88
CAST-201ENST00000309190 IGKV2D-28P01615 120 aa3.33□□□□□ -1.88
CAST-201ENST00000309190 SPAG11BQ08648 103 aa3.33□□□□□ -1.88
CAST-201ENST00000309190 NDUFA12Q9UI09 145 aa3.33□□□□□ -1.88
CAST-201ENST00000309190 DNAH9Q9NYC9 4486 aa3.32□□□□□ -1.88
CAST-201ENST00000309190 J3QQQ9 107 aa3.32□□□□□ -1.88
CAST-201ENST00000309190 COX7A2LO14548 114 aa3.32□□□□□ -1.88
CAST-201ENST00000309190 LINC00242Q5T6M2 205 aa3.32□□□□□ -1.88
CAST-201ENST00000309190 Q75L30 129 aa3.32□□□□□ -1.88
CAST-201ENST00000309190 CDC42SE2Q9NRR3 84 aa3.32□□□□□ -1.88
CAST-201ENST00000309190 EPPK1P58107 5090 aaKnown RBP3.32□□□□□ -1.88
CAST-201ENST00000309190 LOC107984156A0A0G2JMH3 177 aa3.32□□□□□ -1.88
CAST-201ENST00000309190 NDUFV3P56181 108 aaKnown RBP3.32□□□□□ -1.88
CAST-201ENST00000309190 SOSTDC1Q6X4U4 206 aa3.32□□□□□ -1.88
CAST-201ENST00000309190 FAM19A5Q7Z5A7 132 aaPredicted RBP3.32□□□□□ -1.88
CAST-201ENST00000309190 ARL17AQ8IVW1 177 aa3.32□□□□□ -1.88
CAST-201ENST00000309190 TRBV10-2A0A0K0K1G8 114 aa3.32□□□□□ -1.88
CAST-201ENST00000309190 EPM2AB3EWF7 344 aa3.32□□□□□ -1.88
CAST-201ENST00000309190 LELP1Q5T871 98 aa3.31□□□□□ -1.88
CAST-201ENST00000309190 ENHOQ6UWT2 76 aa3.31□□□□□ -1.88
CAST-201ENST00000309190 NCR3O14931 201 aa3.31□□□□□ -1.88
CAST-201ENST00000309190 MUSTN1Q8IVN3 82 aa3.31□□□□□ -1.88
CAST-201ENST00000309190 TEX49A0A1B0GTD5 131 aa3.31□□□□□ -1.88
CAST-201ENST00000309190 SLC25A20O43772 301 aa3.31□□□□□ -1.88
CAST-201ENST00000309190 MIAQ16674 131 aa3.31□□□□□ -1.88
CAST-201ENST00000309190 UPK3BQ9BT76 320 aa3.31□□□□□ -1.88
CAST-201ENST00000309190 HERVK_113P61574 105 aa3.3□□□□□ -1.88
CAST-201ENST00000309190 LINC00167Q96N53 147 aa3.3□□□□□ -1.88
CAST-201ENST00000309190 IGHV1-58A0A0C4DH39 117 aa3.3□□□□□ -1.88
CAST-201ENST00000309190 NUPR2A6NF83 97 aa3.3□□□□□ -1.88
CAST-201ENST00000309190 CCDC179H3BU77 68 aa3.3□□□□□ -1.88
CAST-201ENST00000309190 OXTP01178 125 aa3.3□□□□□ -1.88
CAST-201ENST00000309190 SCGB1C2P0DMR2 95 aa3.3□□□□□ -1.88
CAST-201ENST00000309190 RPL24P83731 157 aaKnown RBP3.3□□□□□ -1.88
CAST-201ENST00000309190 C1orf195Q5TG92 126 aa3.3□□□□□ -1.88
CAST-201ENST00000309190 PSMB2P49721 201 aa3.3□□□□□ -1.88
CAST-201ENST00000309190 CYSTM1Q9H1C7 97 aa3.3□□□□□ -1.88
CAST-201ENST00000309190 GAGE2AQ6NT46 116 aa3.3□□□□□ -1.88
CAST-201ENST00000309190 REG3GQ6UW15 175 aa3.3□□□□□ -1.88
CAST-201ENST00000309190 MIR7-3HGQ8N6C7 128 aa3.3□□□□□ -1.88
CAST-201ENST00000309190 FAM168BA1KXE4 195 aa3.29□□□□□ -1.88
CAST-201ENST00000309190 H3BT86 120 aa3.29□□□□□ -1.88
CAST-201ENST00000309190 NDUFA1O15239 70 aa3.29□□□□□ -1.88
CAST-201ENST00000309190 SEC61BP60468 96 aaKnown RBP3.29□□□□□ -1.88
CAST-201ENST00000309190 DEFB105AQ8NG35 78 aa3.29□□□□□ -1.88
CAST-201ENST00000309190 HUWE1Q7Z6Z7 4374 aaKnown RBP3.29□□□□□ -1.88
CAST-201ENST00000309190 HYDINQ4G0P3 5121 aa3.29□□□□□ -1.88
CAST-201ENST00000309190 FAM218AQ96MZ4 157 aa3.29□□□□□ -1.88
CAST-201ENST00000309190 APLNQ9ULZ1 77 aa3.29□□□□□ -1.88
CAST-201ENST00000309190 C9orf129Q5T035 196 aaKnown RBP3.29□□□□□ -1.88
CAST-201ENST00000309190 C1orf134Q5TEV5 83 aa3.29□□□□□ -1.88
CAST-201ENST00000309190 Q6ZRU5 148 aa3.28□□□□□ -1.88
CAST-201ENST00000309190 KMT2AQ03164 3969 aa3.28□□□□□ -1.88
CAST-201ENST00000309190 BIRC6Q9NR09 4857 aa3.28□□□□□ -1.88
CAST-201ENST00000309190 NBDYA0A0U1RRE5 68 aa3.28□□□□□ -1.88
CAST-201ENST00000309190 UBE2BP63146 152 aa3.28□□□□□ -1.88
CAST-201ENST00000309190 STARD9Q9P2P6 4700 aa3.28□□□□□ -1.88
CAST-201ENST00000309190 IMUPQ9GZP8 106 aa3.28□□□□□ -1.88
CAST-201ENST00000309190 TRAV8-4A0A0B4J246 113 aa3.27□□□□□ -1.89
CAST-201ENST00000309190 C15orf53Q8NAA6 179 aa3.27□□□□□ -1.89
CAST-201ENST00000309190 COX7B2Q8TF08 81 aa3.27□□□□□ -1.89
CAST-201ENST00000309190 SPANXA1Q9NS26 97 aa3.27□□□□□ -1.89
CAST-201ENST00000309190 SMIM1B2RUZ4 78 aa3.27□□□□□ -1.89
CAST-201ENST00000309190 DNAH10Q8IVF4 4471 aa3.27□□□□□ -1.89
CAST-201ENST00000309190 J3QR89 54 aa3.27□□□□□ -1.89
CAST-201ENST00000309190 PLECQ15149 4684 aaKnown RBP3.27□□□□□ -1.89
CAST-201ENST00000309190 S100A7L2Q5SY68 101 aa3.27□□□□□ -1.89
CAST-201ENST00000309190 HERVK_113P63121 156 aa3.26□□□□□ -1.89
CAST-201ENST00000309190 LINC00476Q8WZB0 136 aa3.26□□□□□ -1.89
CAST-201ENST00000309190 HIGD2AQ9BW72 106 aa3.26□□□□□ -1.89
CAST-201ENST00000309190 SYCNQ0VAF6 134 aa3.26□□□□□ -1.89
CAST-201ENST00000309190 ATXN8Q156A1 80 aa3.26□□□□□ -1.89
CAST-201ENST00000309190 NTN5Q8WTR8 489 aaPredicted RBP3.26□□□□□ -1.89
CAST-201ENST00000309190 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.25□□□□□ -1.89
CAST-201ENST00000309190 KRTAP10-2P60368 255 aa3.25□□□□□ -1.89
CAST-201ENST00000309190 RYR1P21817 5038 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms