RNA–Protein interactions for RNA: ENST00000308330.2

LEMD3-201, Transcript of LEM domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LEMD3, Length 4,764 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-201ENST00000308330 CYSTM1Q9H1C7 97 aa10.85□□□□□ -0.67
LEMD3-201ENST00000308330 LINC00337Q8N6G1 96 aa10.85□□□□□ -0.67
LEMD3-201ENST00000308330 C16orf95Q9H693 158 aa10.85□□□□□ -0.67
LEMD3-201ENST00000308330 IGLV1-51P01701 117 aa10.85□□□□□ -0.67
LEMD3-201ENST00000308330 C1orf64Q8NEQ6 169 aa10.85□□□□□ -0.67
LEMD3-201ENST00000308330 PRR9Q5T870 116 aa10.84□□□□□ -0.67
LEMD3-201ENST00000308330 MUC7Q8TAX7 377 aa10.84□□□□□ -0.67
LEMD3-201ENST00000308330 TET2Q6N021 2002 aaPredicted RBP10.84□□□□□ -0.67
LEMD3-201ENST00000308330 CPAMD8Q8IZJ3 1885 aa10.84□□□□□ -0.67
LEMD3-201ENST00000308330 SMIM1B2RUZ4 78 aa10.84□□□□□ -0.67
LEMD3-201ENST00000308330 PROK1P58294 105 aa10.83□□□□□ -0.68
LEMD3-201ENST00000308330 TRIOO75962 3097 aa10.83□□□□□ -0.68
LEMD3-201ENST00000308330 LINC00242Q5T6M2 205 aa10.82□□□□□ -0.68
LEMD3-201ENST00000308330 SMIM29Q86T20 159 aa10.82□□□□□ -0.68
LEMD3-201ENST00000308330 MGAQ8IWI9 3026 aa10.82□□□□□ -0.68
LEMD3-201ENST00000308330 LINC00575Q6W349 94 aa10.82□□□□□ -0.68
LEMD3-201ENST00000308330 WDFY4Q6ZS81 3184 aa10.81□□□□□ -0.68
LEMD3-201ENST00000308330 LAMA2P24043 3122 aaKnown RBP10.81□□□□□ -0.68
LEMD3-201ENST00000308330 C6orf223Q8N319 242 aa10.8□□□□□ -0.68
LEMD3-201ENST00000308330 LINC01600Q96MT4 127 aa10.8□□□□□ -0.68
LEMD3-201ENST00000308330 KPRPQ5T749 579 aaPredicted RBP10.8□□□□□ -0.68
LEMD3-201ENST00000308330 IGKV2-24A0A0C4DH68 120 aa10.79□□□□□ -0.68
LEMD3-201ENST00000308330 REG3AQ06141 175 aa10.79□□□□□ -0.68
LEMD3-201ENST00000308330 H0Y9P7 68 aa10.78□□□□□ -0.68
LEMD3-201ENST00000308330 SYCNQ0VAF6 134 aa10.78□□□□□ -0.68
LEMD3-201ENST00000308330 KLLNB2CW77 178 aa10.78□□□□□ -0.68
LEMD3-201ENST00000308330 Q1T7F1 81 aa10.78□□□□□ -0.68
LEMD3-201ENST00000308330 DSPP15924 2871 aaKnown RBP10.77□□□□□ -0.68
LEMD3-201ENST00000308330 M0R2N4 97 aa10.77□□□□□ -0.68
LEMD3-201ENST00000308330 LY6G6CO95867 125 aa10.77□□□□□ -0.68
LEMD3-201ENST00000308330 LOC101927531A0A1B0GV80 90 aa10.76□□□□□ -0.69
LEMD3-201ENST00000308330 LINC01554Q52M75 96 aa10.76□□□□□ -0.69
LEMD3-201ENST00000308330 C10orf25Q5T742 122 aa10.76□□□□□ -0.69
LEMD3-201ENST00000308330 LYPD5Q6UWN5 251 aa10.76□□□□□ -0.69
LEMD3-201ENST00000308330 COX6A2Q02221 97 aa10.76□□□□□ -0.69
LEMD3-201ENST00000308330 C14orf177Q52M58 125 aa10.75□□□□□ -0.69
LEMD3-201ENST00000308330 Q6ZQT0 140 aa10.74□□□□□ -0.69
LEMD3-201ENST00000308330 MUC4Q99102 2169 aa10.74□□□□□ -0.69
LEMD3-201ENST00000308330 PCOTHQ58A44 107 aa10.74□□□□□ -0.69
LEMD3-201ENST00000308330 STAB1Q9NY15 2570 aa10.73□□□□□ -0.69
LEMD3-201ENST00000308330 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.73□□□□□ -0.69
LEMD3-201ENST00000308330 SPATA3Q8NHX4 192 aa10.73□□□□□ -0.69
LEMD3-201ENST00000308330 CHCHD10Q8WYQ3 142 aaPredicted RBP10.73□□□□□ -0.69
LEMD3-201ENST00000308330 LITAFQ99732 161 aa10.72□□□□□ -0.69
LEMD3-201ENST00000308330 LOC100131303A0A0U1RQF7 123 aa10.71□□□□□ -0.69
LEMD3-201ENST00000308330 KRTAP24-1Q3LI83 254 aa10.71□□□□□ -0.69
LEMD3-201ENST00000308330 UNC80Q8N2C7 3258 aa10.7□□□□□ -0.7
LEMD3-201ENST00000308330 LOC110117498A0A087WWA1 95 aa10.7□□□□□ -0.7
LEMD3-201ENST00000308330 C11orf72Q8NBR9 251 aa10.7□□□□□ -0.7
LEMD3-201ENST00000308330 PRR3P79522 188 aaKnown RBP10.7□□□□□ -0.7
LEMD3-201ENST00000308330 CDC42SE1Q9NRR8 79 aa10.7□□□□□ -0.7
LEMD3-201ENST00000308330 KIF25-AS1Q9Y6Z4 181 aa10.69□□□□□ -0.7
LEMD3-201ENST00000308330 COX17Q14061 63 aa10.69□□□□□ -0.7
LEMD3-201ENST00000308330 MRGPRG-AS1Q2M3A8 158 aa10.68□□□□□ -0.7
LEMD3-201ENST00000308330 CDC42SE2Q9NRR3 84 aa10.68□□□□□ -0.7
LEMD3-201ENST00000308330 MAP1AP78559 2803 aaPredicted RBP10.68□□□□□ -0.7
LEMD3-201ENST00000308330 CHCHD7Q9BUK0 85 aa10.68□□□□□ -0.7
LEMD3-201ENST00000308330 XAGE1AQ9HD64 81 aa10.68□□□□□ -0.7
LEMD3-201ENST00000308330 PCSK5Q92824 1860 aa10.67□□□□□ -0.7
LEMD3-201ENST00000308330 FSHBP01225 129 aa10.67□□□□□ -0.7
LEMD3-201ENST00000308330 XIRP2A4UGR9 3374 aa10.67□□□□□ -0.7
LEMD3-201ENST00000308330 IGLV5-39A0A0G2JS06 123 aa10.66□□□□□ -0.7
LEMD3-201ENST00000308330 Q6ZTC4 211 aa10.66□□□□□ -0.7
LEMD3-201ENST00000308330 LELP1Q5T871 98 aa10.65□□□□□ -0.7
LEMD3-201ENST00000308330 CHD6Q8TD26 2715 aa10.65□□□□□ -0.7
LEMD3-201ENST00000308330 FAM229BQ4G0N7 80 aa10.65□□□□□ -0.71
LEMD3-201ENST00000308330 LINC00588Q9Y4M8 146 aa10.64□□□□□ -0.71
LEMD3-201ENST00000308330 Q8IZM0 81 aa10.64□□□□□ -0.71
LEMD3-201ENST00000308330 ELOF1P60002 83 aaKnown RBP10.63□□□□□ -0.71
LEMD3-201ENST00000308330 C1orf137Q5JT78 98 aa10.63□□□□□ -0.71
LEMD3-201ENST00000308330 DEFB116Q30KQ4 102 aa10.63□□□□□ -0.71
LEMD3-201ENST00000308330 NUPR2A6NF83 97 aa10.62□□□□□ -0.71
LEMD3-201ENST00000308330 BAHCC1Q9P281 2608 aa10.62□□□□□ -0.71
LEMD3-201ENST00000308330 A0A1B0GU69 56 aa10.62□□□□□ -0.71
LEMD3-201ENST00000308330 COL6A5A8TX70 2615 aa10.62□□□□□ -0.71
LEMD3-201ENST00000308330 EIF4EBP3O60516 100 aaPredicted RBP10.62□□□□□ -0.71
LEMD3-201ENST00000308330 CFAP54Q96N23 3096 aa10.61□□□□□ -0.71
LEMD3-201ENST00000308330 H3BPC8 53 aa10.6□□□□□ -0.71
LEMD3-201ENST00000308330 TEX15Q9BXT5 2789 aa10.59□□□□□ -0.71
LEMD3-201ENST00000308330 DHRS4-AS1Q9P1J3 65 aa10.59□□□□□ -0.71
LEMD3-201ENST00000308330 TRBV7-4A0A0J9YYF1 115 aa10.58□□□□□ -0.72
LEMD3-201ENST00000308330 A8MTW9 85 aa10.58□□□□□ -0.72
LEMD3-201ENST00000308330 SPINT4Q6UDR6 99 aa10.58□□□□□ -0.72
LEMD3-201ENST00000308330 LINC00959A0A1B0GUT2 108 aa10.58□□□□□ -0.72
LEMD3-201ENST00000308330 COA5Q86WW8 74 aa10.58□□□□□ -0.72
LEMD3-201ENST00000308330 AKAP13Q12802 2813 aa10.58□□□□□ -0.72
LEMD3-201ENST00000308330 Q6ZRP5 223 aa10.55□□□□□ -0.72
LEMD3-201ENST00000308330 UNC79Q9P2D8 2635 aa10.55□□□□□ -0.72
LEMD3-201ENST00000308330 IGSF10Q6WRI0 2623 aa10.54□□□□□ -0.72
LEMD3-201ENST00000308330 LINC00315P59091 139 aa10.53□□□□□ -0.72
LEMD3-201ENST00000308330 IGLV5-45A0A087WSX0 123 aa10.53□□□□□ -0.72
LEMD3-201ENST00000308330 IGKV2-28A0A075B6P5 120 aa10.52□□□□□ -0.73
LEMD3-201ENST00000308330 IGKV2D-28P01615 120 aa10.52□□□□□ -0.73
LEMD3-201ENST00000308330 C9orf129Q5T035 196 aaKnown RBP10.52□□□□□ -0.73
LEMD3-201ENST00000308330 C16orf90A8MZG2 172 aa10.51□□□□□ -0.73
LEMD3-201ENST00000308330 PRAC1Q96KF2 57 aa10.51□□□□□ -0.73
LEMD3-201ENST00000308330 A0A096LNI7 61 aa10.5□□□□□ -0.73
LEMD3-201ENST00000308330 C7orf33Q8WU49 177 aa10.5□□□□□ -0.73
LEMD3-201ENST00000308330 A0A1B0GW54 56 aa10.46□□□□□ -0.73
LEMD3-201ENST00000308330 LINC00313P59037 77 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms