RNA–Protein interactions for RNA: ENST00000306042.9

PTPRE-202, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 1 (best) BASIC

Gene PTPRE, Length 4,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-202ENST00000306042 H3BT86 120 aa6.31□□□□□ -1.4
PTPRE-202ENST00000306042 A0A096LNJ9 63 aa6.3□□□□□ -1.4
PTPRE-202ENST00000306042 HRCT1Q6UXD1 115 aa6.3□□□□□ -1.4
PTPRE-202ENST00000306042 SMIM11BQ8TCY0 68 aa6.3□□□□□ -1.4
PTPRE-202ENST00000306042 NBEAL1Q6ZS30 2694 aa6.3□□□□□ -1.4
PTPRE-202ENST00000306042 PRR3P79522 188 aaKnown RBP6.3□□□□□ -1.4
PTPRE-202ENST00000306042 BOD1L1Q8NFC6 3051 aa6.3□□□□□ -1.4
PTPRE-202ENST00000306042 SPINK6Q6UWN8 80 aa6.3□□□□□ -1.4
PTPRE-202ENST00000306042 APLNQ9ULZ1 77 aa6.29□□□□□ -1.4
PTPRE-202ENST00000306042 LINC00310P59036 64 aa6.29□□□□□ -1.4
PTPRE-202ENST00000306042 Q6ZRP5 223 aa6.29□□□□□ -1.4
PTPRE-202ENST00000306042 LINC00612Q8N6U2 182 aa6.29□□□□□ -1.4
PTPRE-202ENST00000306042 C22orf24Q9Y442 160 aa6.29□□□□□ -1.4
PTPRE-202ENST00000306042 FREM2Q5SZK8 3169 aa6.28□□□□□ -1.4
PTPRE-202ENST00000306042 TRIAP1O43715 76 aa6.28□□□□□ -1.4
PTPRE-202ENST00000306042 PRYO14603 147 aa6.28□□□□□ -1.4
PTPRE-202ENST00000306042 TSPEAR-AS2P59090 65 aa6.28□□□□□ -1.4
PTPRE-202ENST00000306042 RPL37AP61513 92 aaKnown RBP6.28□□□□□ -1.4
PTPRE-202ENST00000306042 HIVEP1P15822 2718 aa6.28□□□□□ -1.4
PTPRE-202ENST00000306042 CIRBP-AS1Q8TBR5 109 aa6.28□□□□□ -1.4
PTPRE-202ENST00000306042 ITPR1Q14643 2758 aa6.27□□□□□ -1.4
PTPRE-202ENST00000306042 C10orf25Q5T742 122 aa6.27□□□□□ -1.41
PTPRE-202ENST00000306042 C14orf132Q9NPU4 83 aa6.27□□□□□ -1.41
PTPRE-202ENST00000306042 ACYP1P07311 99 aa6.27□□□□□ -1.41
PTPRE-202ENST00000306042 EPM2AB3EWF7 344 aa6.27□□□□□ -1.41
PTPRE-202ENST00000306042 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.27□□□□□ -1.41
PTPRE-202ENST00000306042 NDUFC2O95298 119 aa6.27□□□□□ -1.41
PTPRE-202ENST00000306042 C6orf48Q9UBA6 75 aa6.26□□□□□ -1.41
PTPRE-202ENST00000306042 CCKP06307 115 aa6.26□□□□□ -1.41
PTPRE-202ENST00000306042 XGP55808 180 aa6.26□□□□□ -1.41
PTPRE-202ENST00000306042 KALRNO60229 2985 aa6.26□□□□□ -1.41
PTPRE-202ENST00000306042 CASC10Q5T4H9 136 aa6.26□□□□□ -1.41
PTPRE-202ENST00000306042 GVQW2A0A096LPI5 108 aaPredicted RBP6.25□□□□□ -1.41
PTPRE-202ENST00000306042 IGLV5-39A0A0G2JS06 123 aa6.25□□□□□ -1.41
PTPRE-202ENST00000306042 TAX1BP3O14907 124 aa6.25□□□□□ -1.41
PTPRE-202ENST00000306042 TEN1Q86WV5 123 aa6.25□□□□□ -1.41
PTPRE-202ENST00000306042 LINC00476Q8WZB0 136 aa6.25□□□□□ -1.41
PTPRE-202ENST00000306042 PRLHP81277 87 aa6.25□□□□□ -1.41
PTPRE-202ENST00000306042 ADAMTSL4-AS1Q5T5F5 129 aa6.24□□□□□ -1.41
PTPRE-202ENST00000306042 NBEAQ8NFP9 2946 aa6.24□□□□□ -1.41
PTPRE-202ENST00000306042 BPY2O14599 106 aa6.24□□□□□ -1.41
PTPRE-202ENST00000306042 UPK3BQ9BT76 320 aa6.24□□□□□ -1.41
PTPRE-202ENST00000306042 ANAPC13Q9BS18 74 aa6.24□□□□□ -1.41
PTPRE-202ENST00000306042 LINC01546A6NGU7 62 aa6.23□□□□□ -1.41
PTPRE-202ENST00000306042 A0A1B0GX51 115 aa6.23□□□□□ -1.41
PTPRE-202ENST00000306042 A0A087WTM6 91 aa6.23□□□□□ -1.41
PTPRE-202ENST00000306042 TEX49A0A1B0GTD5 131 aa6.23□□□□□ -1.41
PTPRE-202ENST00000306042 TACC2O95359 2948 aa6.23□□□□□ -1.41
PTPRE-202ENST00000306042 UTP20O75691 2785 aaKnown RBP6.23□□□□□ -1.41
PTPRE-202ENST00000306042 CRYGAP11844 174 aa6.23□□□□□ -1.41
PTPRE-202ENST00000306042 LINC00167Q96N53 147 aa6.23□□□□□ -1.41
PTPRE-202ENST00000306042 CHTF8P0CG12 524 aa6.22□□□□□ -1.41
PTPRE-202ENST00000306042 Q6JHZ5 121 aa6.22□□□□□ -1.41
PTPRE-202ENST00000306042 IGLV5-45A0A087WSX0 123 aa6.22□□□□□ -1.41
PTPRE-202ENST00000306042 WFDC2Q14508 124 aa6.22□□□□□ -1.41
PTPRE-202ENST00000306042 C2orf91Q6ZV80 131 aa6.22□□□□□ -1.41
PTPRE-202ENST00000306042 LCE6AA0A183 80 aa6.21□□□□□ -1.41
PTPRE-202ENST00000306042 NDUFV3P56181 108 aaKnown RBP6.21□□□□□ -1.41
PTPRE-202ENST00000306042 PHF5AQ7RTV0 110 aaKnown RBP6.21□□□□□ -1.41
PTPRE-202ENST00000306042 APCP25054 2843 aa6.21□□□□□ -1.42
PTPRE-202ENST00000306042 Q9BRP9 147 aa6.21□□□□□ -1.42
PTPRE-202ENST00000306042 IGKV3D-7A0A0C4DH55 119 aa6.21□□□□□ -1.42
PTPRE-202ENST00000306042 A0A0U1RQV1 116 aa6.2□□□□□ -1.42
PTPRE-202ENST00000306042 SMCR5Q8TEV8 140 aa6.2□□□□□ -1.42
PTPRE-202ENST00000306042 PRR34Q9NV39 138 aa6.2□□□□□ -1.42
PTPRE-202ENST00000306042 FAM236DA0A1B0GTK5 79 aa6.2□□□□□ -1.42
PTPRE-202ENST00000306042 FAM236CP0DP71 79 aa6.2□□□□□ -1.42
PTPRE-202ENST00000306042 Q8N814 137 aa6.19□□□□□ -1.42
PTPRE-202ENST00000306042 ZZEF1O43149 2961 aa6.19□□□□□ -1.42
PTPRE-202ENST00000306042 MP68P56378 58 aa6.19□□□□□ -1.42
PTPRE-202ENST00000306042 LST1O00453 97 aa6.19□□□□□ -1.42
PTPRE-202ENST00000306042 B5MCH6 92 aa6.18□□□□□ -1.42
PTPRE-202ENST00000306042 ADGRG4Q8IZF6 3080 aa6.18□□□□□ -1.42
PTPRE-202ENST00000306042 A0A087WYN8 130 aa6.18□□□□□ -1.42
PTPRE-202ENST00000306042 SVIPQ8NHG7 77 aa6.18□□□□□ -1.42
PTPRE-202ENST00000306042 SPEGQ15772 3267 aa6.17□□□□□ -1.42
PTPRE-202ENST00000306042 SPAG11AQ6PDA7 123 aa6.17□□□□□ -1.42
PTPRE-202ENST00000306042 NSD1Q96L73 2696 aaPredicted RBP6.17□□□□□ -1.42
PTPRE-202ENST00000306042 USP34Q70CQ2 3546 aa6.16□□□□□ -1.42
PTPRE-202ENST00000306042 IGKV4-1P06312 121 aa6.16□□□□□ -1.42
PTPRE-202ENST00000306042 FAM19A3Q7Z5A8 133 aa6.16□□□□□ -1.42
PTPRE-202ENST00000306042 ZNF575Q86XF7 245 aa6.15□□□□□ -1.43
PTPRE-202ENST00000306042 SMR3BP02814 79 aaPredicted RBP6.15□□□□□ -1.43
PTPRE-202ENST00000306042 SCXQ7RTU7 201 aa6.15□□□□□ -1.43
PTPRE-202ENST00000306042 C9orf163Q8N9P6 203 aa6.15□□□□□ -1.43
PTPRE-202ENST00000306042 TYMSOSQ8TAI1 123 aa6.14□□□□□ -1.43
PTPRE-202ENST00000306042 C15orf56Q8N910 161 aa6.13□□□□□ -1.43
PTPRE-202ENST00000306042 CHKB-CPT1BH3BT56 60 aa6.13□□□□□ -1.43
PTPRE-202ENST00000306042 LINC00575Q6W349 94 aa6.13□□□□□ -1.43
PTPRE-202ENST00000306042 TNP2Q05952 138 aa6.13□□□□□ -1.43
PTPRE-202ENST00000306042 BCE1O60756 84 aa6.12□□□□□ -1.43
PTPRE-202ENST00000306042 CASC2Q6XLA1 102 aa6.12□□□□□ -1.43
PTPRE-202ENST00000306042 PRR4Q16378 134 aa6.12□□□□□ -1.43
PTPRE-202ENST00000306042 MOBPQ13875 183 aa6.11□□□□□ -1.43
PTPRE-202ENST00000306042 SEC61GP60059 68 aa6.11□□□□□ -1.43
PTPRE-202ENST00000306042 FAM168BA1KXE4 195 aa6.1□□□□□ -1.43
PTPRE-202ENST00000306042 LRBAP50851 2863 aa6.1□□□□□ -1.43
PTPRE-202ENST00000306042 A0A087WSZ3 146 aa6.1□□□□□ -1.43
PTPRE-202ENST00000306042 LINC00643Q86TS7 51 aa6.1□□□□□ -1.43
PTPRE-202ENST00000306042 SPACA4Q8TDM5 124 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms