RNA–Protein interactions for RNA: ENST00000299543.8

CTDP1-202, Transcript of CTD phosphatase subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTDP1, Length 3,380 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-202ENST00000299543 TEP1Q99973 2627 aaKnown RBP9.32□□□□□ -0.92
CTDP1-202ENST00000299543 V9GYY9 64 aa9.32□□□□□ -0.92
CTDP1-202ENST00000299543 SEC61GP60059 68 aa9.31□□□□□ -0.92
CTDP1-202ENST00000299543 UBL5Q9BZL1 73 aa9.31□□□□□ -0.92
CTDP1-202ENST00000299543 OTOGQ6ZRI0 2925 aa9.31□□□□□ -0.92
CTDP1-202ENST00000299543 IBA57-AS1B1ANH7 110 aa9.3□□□□□ -0.92
CTDP1-202ENST00000299543 F8WEM9 126 aa9.3□□□□□ -0.92
CTDP1-202ENST00000299543 SCXQ7RTU7 201 aa9.3□□□□□ -0.92
CTDP1-202ENST00000299543 PRO0255Q9UI72 69 aa9.3□□□□□ -0.92
CTDP1-202ENST00000299543 C9orf116Q5BN46 136 aaPredicted RBP9.3□□□□□ -0.92
CTDP1-202ENST00000299543 NDUFC2O95298 119 aa9.3□□□□□ -0.92
CTDP1-202ENST00000299543 C1orf195Q5TG92 126 aa9.3□□□□□ -0.92
CTDP1-202ENST00000299543 FP248Q71RG6 208 aaPredicted RBP9.29□□□□□ -0.92
CTDP1-202ENST00000299543 ANK3Q12955 4377 aaKnown RBP9.29□□□□□ -0.92
CTDP1-202ENST00000299543 ORMDL1Q9P0S3 153 aa9.29□□□□□ -0.92
CTDP1-202ENST00000299543 PRB2P02812 416 aaPredicted RBP9.28□□□□□ -0.92
CTDP1-202ENST00000299543 X6R8D5 127 aa9.28□□□□□ -0.92
CTDP1-202ENST00000299543 LAMTOR3Q9UHA4 124 aa9.27□□□□□ -0.92
CTDP1-202ENST00000299543 DAD1P61803 113 aa9.27□□□□□ -0.93
CTDP1-202ENST00000299543 LYPD5Q6UWN5 251 aa9.27□□□□□ -0.93
CTDP1-202ENST00000299543 LRCOL1A6NCL2 159 aa9.27□□□□□ -0.93
CTDP1-202ENST00000299543 J3QKU1 62 aa9.26□□□□□ -0.93
CTDP1-202ENST00000299543 CHCHD10Q8WYQ3 142 aaPredicted RBP9.26□□□□□ -0.93
CTDP1-202ENST00000299543 TRRAPQ9Y4A5 3859 aa9.25□□□□□ -0.93
CTDP1-202ENST00000299543 SERP1Q9Y6X1 66 aa9.25□□□□□ -0.93
CTDP1-202ENST00000299543 H0YGX0 51 aa9.24□□□□□ -0.93
CTDP1-202ENST00000299543 LY6G6DO95868 133 aa9.24□□□□□ -0.93
CTDP1-202ENST00000299543 INAFM1C9JVW0 142 aa9.24□□□□□ -0.93
CTDP1-202ENST00000299543 H7BZZ5 65 aa9.24□□□□□ -0.93
CTDP1-202ENST00000299543 REG3AQ06141 175 aa9.24□□□□□ -0.93
CTDP1-202ENST00000299543 IGHV4-28A0A0C4DH34 117 aa9.23□□□□□ -0.93
CTDP1-202ENST00000299543 NSD1Q96L73 2696 aaPredicted RBP9.23□□□□□ -0.93
CTDP1-202ENST00000299543 CELA1Q9UNI1 258 aa9.22□□□□□ -0.93
CTDP1-202ENST00000299543 SMIM26A0A096LP01 95 aa9.22□□□□□ -0.93
CTDP1-202ENST00000299543 C6orf223Q8N319 242 aa9.22□□□□□ -0.93
CTDP1-202ENST00000299543 FLNBO75369 2602 aaKnown RBP9.21□□□□□ -0.93
CTDP1-202ENST00000299543 TRAV10A0A0B4J240 114 aa9.21□□□□□ -0.93
CTDP1-202ENST00000299543 Q8IZM0 81 aa9.21□□□□□ -0.93
CTDP1-202ENST00000299543 A0A1B0GUV1 79 aa9.21□□□□□ -0.94
CTDP1-202ENST00000299543 CCKP06307 115 aa9.21□□□□□ -0.94
CTDP1-202ENST00000299543 KLK12Q9UKR0 248 aa9.21□□□□□ -0.94
CTDP1-202ENST00000299543 M0R2N4 97 aa9.21□□□□□ -0.94
CTDP1-202ENST00000299543 TRBV7-6A0A0J9YX20 115 aa9.2□□□□□ -0.94
CTDP1-202ENST00000299543 FAM229BQ4G0N7 80 aa9.2□□□□□ -0.94
CTDP1-202ENST00000299543 HIVEP1P15822 2718 aa9.2□□□□□ -0.94
CTDP1-202ENST00000299543 F8WDY8 70 aa9.2□□□□□ -0.94
CTDP1-202ENST00000299543 C9orf66Q5T8R8 295 aa9.2□□□□□ -0.94
CTDP1-202ENST00000299543 CD164L2Q6UWJ8 174 aa9.2□□□□□ -0.94
CTDP1-202ENST00000299543 UNQ6190/PRO20217Q6UXQ8 127 aa9.19□□□□□ -0.94
CTDP1-202ENST00000299543 NDUFC2-KCTD14E9PQ53 114 aa9.18□□□□□ -0.94
CTDP1-202ENST00000299543 LYRM9A8MSI8 78 aa9.18□□□□□ -0.94
CTDP1-202ENST00000299543 C6orf99Q4VX62 202 aa9.18□□□□□ -0.94
CTDP1-202ENST00000299543 C10orf25Q5T742 122 aa9.18□□□□□ -0.94
CTDP1-202ENST00000299543 LINC00612Q8N6U2 182 aa9.17□□□□□ -0.94
CTDP1-202ENST00000299543 APOC4P55056 127 aa9.17□□□□□ -0.94
CTDP1-202ENST00000299543 PKD1L1Q8TDX9 2849 aa9.17□□□□□ -0.94
CTDP1-202ENST00000299543 SPAG11BQ08648 103 aa9.16□□□□□ -0.94
CTDP1-202ENST00000299543 KIAA0087Q14695 138 aa9.16□□□□□ -0.94
CTDP1-202ENST00000299543 F8P00451 2351 aa9.15□□□□□ -0.94
CTDP1-202ENST00000299543 OBSCN-AS1Q96MR7 158 aa9.15□□□□□ -0.94
CTDP1-202ENST00000299543 XAGE1AQ9HD64 81 aa9.15□□□□□ -0.95
CTDP1-202ENST00000299543 TRAV7A0A075B6U4 112 aa9.14□□□□□ -0.95
CTDP1-202ENST00000299543 SPART-AS1P0CW21 52 aa9.14□□□□□ -0.95
CTDP1-202ENST00000299543 TM2D3Q9BRN9 247 aa9.14□□□□□ -0.95
CTDP1-202ENST00000299543 JMJD7-PLA2G4BH0Y9G9 81 aa9.14□□□□□ -0.95
CTDP1-202ENST00000299543 Q8NDZ9 215 aa9.14□□□□□ -0.95
CTDP1-202ENST00000299543 CYSRT1A8MQ03 144 aa9.13□□□□□ -0.95
CTDP1-202ENST00000299543 NANOS2P60321 138 aaKnown RBP9.13□□□□□ -0.95
CTDP1-202ENST00000299543 EPM2AB3EWF7 344 aa9.13□□□□□ -0.95
CTDP1-202ENST00000299543 Q8N814 137 aa9.13□□□□□ -0.95
CTDP1-202ENST00000299543 NOTCH1P46531 2555 aa9.13□□□□□ -0.95
CTDP1-202ENST00000299543 Q8N9L7 120 aa9.12□□□□□ -0.95
CTDP1-202ENST00000299543 STAB1Q9NY15 2570 aa9.12□□□□□ -0.95
CTDP1-202ENST00000299543 TMEM256-PLSCR3K7ERE1 68 aa9.12□□□□□ -0.95
CTDP1-202ENST00000299543 IGHV4-30-4P0DP06 118 aa9.11□□□□□ -0.95
CTDP1-202ENST00000299543 HIGD2BQ4VC39 106 aa9.11□□□□□ -0.95
CTDP1-202ENST00000299543 LINC01547P58512 204 aaPredicted RBP9.1□□□□□ -0.95
CTDP1-202ENST00000299543 MIFP14174 115 aa9.1□□□□□ -0.95
CTDP1-202ENST00000299543 Q8NAQ8 132 aa9.1□□□□□ -0.95
CTDP1-202ENST00000299543 RETNQ9HD89 108 aa9.1□□□□□ -0.95
CTDP1-202ENST00000299543 PRR4Q16378 134 aa9.09□□□□□ -0.95
CTDP1-202ENST00000299543 ATP5EP2Q5VTU8 51 aa9.09□□□□□ -0.95
CTDP1-202ENST00000299543 MAST4O15021 2626 aa9.09□□□□□ -0.95
CTDP1-202ENST00000299543 COX17Q14061 63 aa9.08□□□□□ -0.96
CTDP1-202ENST00000299543 LELP1Q5T871 98 aa9.08□□□□□ -0.96
CTDP1-202ENST00000299543 OXLD1Q5BKU9 147 aa9.08□□□□□ -0.96
CTDP1-202ENST00000299543 PSPHP1O15172 72 aa9.07□□□□□ -0.96
CTDP1-202ENST00000299543 Q6ZVQ6 151 aa9.07□□□□□ -0.96
CTDP1-202ENST00000299543 ZNF561-AS1K7EIQ3 104 aa9.05□□□□□ -0.96
CTDP1-202ENST00000299543 WFDC10BQ8IUB3 73 aa9.05□□□□□ -0.96
CTDP1-202ENST00000299543 Q6ZQY7 126 aa9.04□□□□□ -0.96
CTDP1-202ENST00000299543 TRBV10-3A0A0K0K1G6 114 aa9.04□□□□□ -0.96
CTDP1-202ENST00000299543 NREPQ16612 68 aa9.04□□□□□ -0.96
CTDP1-202ENST00000299543 TMEM254Q8TBM7 123 aa9.04□□□□□ -0.96
CTDP1-202ENST00000299543 TENM3Q9P273 2699 aa9.04□□□□□ -0.96
CTDP1-202ENST00000299543 LINC00575Q6W349 94 aa9.03□□□□□ -0.96
CTDP1-202ENST00000299543 CAMK2N2Q96S95 79 aa9.03□□□□□ -0.96
CTDP1-202ENST00000299543 FUSP35637 526 aaKnown RBP eCLIP9.03□□□□□ -0.96
CTDP1-202ENST00000299543 KLKP1Q107X0 134 aa9.03□□□□□ -0.96
CTDP1-202ENST00000299543 FBN1P35555 2871 aaKnown RBP9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms