RNA–Protein interactions for RNA: ENST00000296581.10

LSM6-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 2,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-201ENST00000296581 STAB2Q8WWQ8 2551 aa10.5□□□□□ -0.73
LSM6-201ENST00000296581 ADAMTSL4-AS1Q5T5F5 129 aa10.5□□□□□ -0.73
LSM6-201ENST00000296581 CRPP02741 224 aa10.49□□□□□ -0.73
LSM6-201ENST00000296581 TOMM7Q9P0U1 55 aa10.49□□□□□ -0.73
LSM6-201ENST00000296581 LINC00588Q9Y4M8 146 aa10.49□□□□□ -0.73
LSM6-201ENST00000296581 F8WDY8 70 aa10.49□□□□□ -0.73
LSM6-201ENST00000296581 DNAH10OSP0CZ25 163 aa10.49□□□□□ -0.73
LSM6-201ENST00000296581 CXCL5P42830 114 aa10.49□□□□□ -0.73
LSM6-201ENST00000296581 MIAQ16674 131 aa10.48□□□□□ -0.73
LSM6-201ENST00000296581 Q8IZM0 81 aa10.48□□□□□ -0.73
LSM6-201ENST00000296581 LST1O00453 97 aa10.47□□□□□ -0.73
LSM6-201ENST00000296581 CCL18P55774 89 aa10.47□□□□□ -0.73
LSM6-201ENST00000296581 HIST1H4AP62805 103 aaKnown RBP10.47□□□□□ -0.73
LSM6-201ENST00000296581 CIRBPQ14011 172 aaKnown RBP10.47□□□□□ -0.73
LSM6-201ENST00000296581 ATOX1O00244 68 aa10.46□□□□□ -0.73
LSM6-201ENST00000296581 CLEC2BQ92478 149 aa10.46□□□□□ -0.73
LSM6-201ENST00000296581 DSCR8Q96T75 97 aa10.46□□□□□ -0.73
LSM6-201ENST00000296581 COX6CP09669 75 aa10.45□□□□□ -0.74
LSM6-201ENST00000296581 MALP21145 153 aa10.45□□□□□ -0.74
LSM6-201ENST00000296581 SDIM1Q6ZPB5 146 aa10.45□□□□□ -0.74
LSM6-201ENST00000296581 UPK3BQ9BT76 320 aa10.45□□□□□ -0.74
LSM6-201ENST00000296581 KIAA0087Q14695 138 aa10.45□□□□□ -0.74
LSM6-201ENST00000296581 C6orf226Q5I0X4 101 aa10.45□□□□□ -0.74
LSM6-201ENST00000296581 PRSS2P07478 247 aa10.44□□□□□ -0.74
LSM6-201ENST00000296581 KRTAP26-1Q6PEX3 210 aa10.44□□□□□ -0.74
LSM6-201ENST00000296581 DAND5Q8N907 189 aa10.42□□□□□ -0.74
LSM6-201ENST00000296581 APLNQ9ULZ1 77 aa10.42□□□□□ -0.74
LSM6-201ENST00000296581 PRKDCP78527 4128 aaKnown RBP10.41□□□□□ -0.74
LSM6-201ENST00000296581 IBA57-AS1B1ANH7 110 aa10.41□□□□□ -0.74
LSM6-201ENST00000296581 LINC00308Q8TCZ7 52 aa10.41□□□□□ -0.74
LSM6-201ENST00000296581 A0A0U1RRA0 63 aa10.4□□□□□ -0.74
LSM6-201ENST00000296581 PRO0628Q9UI54 55 aa10.4□□□□□ -0.74
LSM6-201ENST00000296581 MEGF8Q7Z7M0 2845 aa10.4□□□□□ -0.74
LSM6-201ENST00000296581 NPC2P61916 151 aa10.39□□□□□ -0.75
LSM6-201ENST00000296581 DYNC2H1Q8NCM8 4307 aaKnown RBP10.39□□□□□ -0.75
LSM6-201ENST00000296581 SPAG11BQ08648 103 aa10.38□□□□□ -0.75
LSM6-201ENST00000296581 COPS9Q8WXC6 57 aa10.38□□□□□ -0.75
LSM6-201ENST00000296581 C1orf43Q9BWL3 253 aa10.38□□□□□ -0.75
LSM6-201ENST00000296581 NUPR2A6NF83 97 aa10.38□□□□□ -0.75
LSM6-201ENST00000296581 RPL18AQ02543 176 aaKnown RBP10.38□□□□□ -0.75
LSM6-201ENST00000296581 SOSTDC1Q6X4U4 206 aa10.38□□□□□ -0.75
LSM6-201ENST00000296581 SERP2Q8N6R1 65 aa10.37□□□□□ -0.75
LSM6-201ENST00000296581 LINC00158P58513 81 aa10.36□□□□□ -0.75
LSM6-201ENST00000296581 MIR7-3HGQ8N6C7 128 aa10.36□□□□□ -0.75
LSM6-201ENST00000296581 IGKV2D-24A0A075B6R9 120 aa10.35□□□□□ -0.75
LSM6-201ENST00000296581 PFN2P35080 140 aa10.34□□□□□ -0.75
LSM6-201ENST00000296581 C6orf223Q8N319 242 aa10.34□□□□□ -0.75
LSM6-201ENST00000296581 COX17Q14061 63 aa10.33□□□□□ -0.76
LSM6-201ENST00000296581 Q9HAA7 133 aa10.33□□□□□ -0.76
LSM6-201ENST00000296581 LINC00336Q6ZUF6 198 aa10.33□□□□□ -0.76
LSM6-201ENST00000296581 C15orf56Q8N910 161 aa10.33□□□□□ -0.76
LSM6-201ENST00000296581 C10orf25Q5T742 122 aa10.32□□□□□ -0.76
LSM6-201ENST00000296581 UNQ6190/PRO20217Q6UXQ8 127 aa10.32□□□□□ -0.76
LSM6-201ENST00000296581 GVQW2A0A096LPI5 108 aaPredicted RBP10.31□□□□□ -0.76
LSM6-201ENST00000296581 UBE2DNLQ8IWF7 75 aa10.31□□□□□ -0.76
LSM6-201ENST00000296581 RMI2Q96E14 147 aa10.31□□□□□ -0.76
LSM6-201ENST00000296581 DNAH7Q8WXX0 4024 aa10.3□□□□□ -0.76
LSM6-201ENST00000296581 ZNF561-AS1K7EIQ3 104 aa10.29□□□□□ -0.76
LSM6-201ENST00000296581 HIGD2BQ4VC39 106 aa10.29□□□□□ -0.76
LSM6-201ENST00000296581 C9orf116Q5BN46 136 aaPredicted RBP10.29□□□□□ -0.76
LSM6-201ENST00000296581 CSMD3Q7Z407 3707 aa10.29□□□□□ -0.76
LSM6-201ENST00000296581 MUC7Q8TAX7 377 aa10.28□□□□□ -0.76
LSM6-201ENST00000296581 SND1-IT1Q9HBX3 110 aa10.28□□□□□ -0.76
LSM6-201ENST00000296581 PKIGQ9Y2B9 76 aa10.28□□□□□ -0.76
LSM6-201ENST00000296581 SEC61GP60059 68 aa10.27□□□□□ -0.76
LSM6-201ENST00000296581 KRTAP1-5Q9BYS1 174 aa10.27□□□□□ -0.76
LSM6-201ENST00000296581 C6orf48Q9UBA6 75 aa10.27□□□□□ -0.76
LSM6-201ENST00000296581 DNAH1Q9P2D7 4330 aa10.27□□□□□ -0.77
LSM6-201ENST00000296581 INAFM2P0DMQ5 153 aa10.26□□□□□ -0.77
LSM6-201ENST00000296581 CAMK2N2Q96S95 79 aa10.26□□□□□ -0.77
LSM6-201ENST00000296581 C22orf24Q9Y442 160 aa10.26□□□□□ -0.77
LSM6-201ENST00000296581 NDUFC2-KCTD14E9PQ53 114 aa10.26□□□□□ -0.77
LSM6-201ENST00000296581 PLECQ15149 4684 aaKnown RBP10.25□□□□□ -0.77
LSM6-201ENST00000296581 USP17L23D6RBM5 183 aa10.25□□□□□ -0.77
LSM6-201ENST00000296581 IGKV2-28A0A075B6P5 120 aa10.24□□□□□ -0.77
LSM6-201ENST00000296581 IGKV2D-28P01615 120 aa10.24□□□□□ -0.77
LSM6-201ENST00000296581 BAALC-AS2P0C853 105 aa10.24□□□□□ -0.77
LSM6-201ENST00000296581 CASC10Q5T4H9 136 aa10.24□□□□□ -0.77
LSM6-201ENST00000296581 A0A087WVE0 104 aa10.24□□□□□ -0.77
LSM6-201ENST00000296581 EPM2AB3EWF7 344 aa10.24□□□□□ -0.77
LSM6-201ENST00000296581 Q6JHZ5 121 aa10.24□□□□□ -0.77
LSM6-201ENST00000296581 IGKV3D-7A0A0C4DH55 119 aa10.23□□□□□ -0.77
LSM6-201ENST00000296581 Q6ZRU5 148 aa10.23□□□□□ -0.77
LSM6-201ENST00000296581 STARD9Q9P2P6 4700 aa10.23□□□□□ -0.77
LSM6-201ENST00000296581 FBN3Q75N90 2809 aa10.23□□□□□ -0.77
LSM6-201ENST00000296581 NDUFC2O95298 119 aa10.23□□□□□ -0.77
LSM6-201ENST00000296581 TRAV13-2A0A0B4J235 113 aa10.22□□□□□ -0.77
LSM6-201ENST00000296581 LINC00337Q8N6G1 96 aa10.22□□□□□ -0.77
LSM6-201ENST00000296581 LYSTQ99698 3801 aa10.2□□□□□ -0.78
LSM6-201ENST00000296581 FAM236DA0A1B0GTK5 79 aa10.2□□□□□ -0.78
LSM6-201ENST00000296581 FAM236CP0DP71 79 aa10.2□□□□□ -0.78
LSM6-201ENST00000296581 SYCNQ0VAF6 134 aa10.2□□□□□ -0.78
LSM6-201ENST00000296581 V9GYY9 64 aa10.2□□□□□ -0.78
LSM6-201ENST00000296581 NBDYA0A0U1RRE5 68 aa10.19□□□□□ -0.78
LSM6-201ENST00000296581 SERP1Q9Y6X1 66 aa10.19□□□□□ -0.78
LSM6-201ENST00000296581 DNAL4O96015 105 aa10.18□□□□□ -0.78
LSM6-201ENST00000296581 Q8NDZ9 215 aa10.17□□□□□ -0.78
LSM6-201ENST00000296581 TENM2Q9NT68 2774 aa10.16□□□□□ -0.78
LSM6-201ENST00000296581 SLPIP03973 132 aa10.16□□□□□ -0.78
LSM6-201ENST00000296581 FAM218AQ96MZ4 157 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms