RNA–Protein interactions for RNA: ENST00000296273.6

RFC4-201, Transcript of replication factor C subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFC4, Length 1,384 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-201ENST00000296273 CFC1BP0CG36 223 aa6.95□□□□□ -1.3
RFC4-201ENST00000296273 CFC1P0CG37 223 aa6.95□□□□□ -1.3
RFC4-201ENST00000296273 SCXQ7RTU7 201 aa6.95□□□□□ -1.3
RFC4-201ENST00000296273 ZNF625Q96I27 306 aaPredicted RBP6.95□□□□□ -1.3
RFC4-201ENST00000296273 PLA2G2DQ9UNK4 145 aa6.95□□□□□ -1.3
RFC4-201ENST00000296273 IGLV4-60A0A075B6I1 120 aa6.94□□□□□ -1.3
RFC4-201ENST00000296273 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.94□□□□□ -1.3
RFC4-201ENST00000296273 A4D1N5 150 aa6.94□□□□□ -1.3
RFC4-201ENST00000296273 WFDC2Q14508 124 aa6.94□□□□□ -1.3
RFC4-201ENST00000296273 COX7B2Q8TF08 81 aa6.94□□□□□ -1.3
RFC4-201ENST00000296273 ERG28Q9UKR5 140 aa6.94□□□□□ -1.3
RFC4-201ENST00000296273 APOMO95445 188 aa6.93□□□□□ -1.3
RFC4-201ENST00000296273 RMI2Q96E14 147 aa6.93□□□□□ -1.3
RFC4-201ENST00000296273 LECT2O14960 151 aa6.92□□□□□ -1.3
RFC4-201ENST00000296273 TSPAN13O95857 204 aa6.92□□□□□ -1.3
RFC4-201ENST00000296273 CXCL5P42830 114 aa6.92□□□□□ -1.3
RFC4-201ENST00000296273 KRTAP10-4P60372 401 aaPredicted RBP6.92□□□□□ -1.3
RFC4-201ENST00000296273 CD164L2Q6UWJ8 174 aa6.92□□□□□ -1.3
RFC4-201ENST00000296273 K7ERU9 68 aa6.91□□□□□ -1.3
RFC4-201ENST00000296273 COX6CP09669 75 aa6.91□□□□□ -1.3
RFC4-201ENST00000296273 MEIG1Q5JSS6 88 aa6.91□□□□□ -1.3
RFC4-201ENST00000296273 Q8IZM0 81 aa6.91□□□□□ -1.3
RFC4-201ENST00000296273 TRAV8-4A0A0B4J246 113 aa6.9□□□□□ -1.31
RFC4-201ENST00000296273 TRBV30A0A0K0K1B3 111 aa6.9□□□□□ -1.31
RFC4-201ENST00000296273 ADAMTSL4-AS1Q5T5F5 129 aa6.9□□□□□ -1.31
RFC4-201ENST00000296273 CIRBP-AS1Q8TBR5 109 aa6.9□□□□□ -1.31
RFC4-201ENST00000296273 COX7A2LO14548 114 aa6.89□□□□□ -1.31
RFC4-201ENST00000296273 REG3AQ06141 175 aa6.89□□□□□ -1.31
RFC4-201ENST00000296273 LINC01620Q4KN68 170 aa6.89□□□□□ -1.31
RFC4-201ENST00000296273 Q8N3U1 123 aa6.89□□□□□ -1.31
RFC4-201ENST00000296273 LINC00308Q8TCZ7 52 aa6.89□□□□□ -1.31
RFC4-201ENST00000296273 NAA38Q9BRA0 125 aaKnown RBP6.89□□□□□ -1.31
RFC4-201ENST00000296273 LRP1Q07954 4544 aaKnown RBP6.88□□□□□ -1.31
RFC4-201ENST00000296273 IGKV2D-24A0A075B6R9 120 aa6.88□□□□□ -1.31
RFC4-201ENST00000296273 LOC107984156A0A0G2JMH3 177 aa6.88□□□□□ -1.31
RFC4-201ENST00000296273 M0QXV9 152 aa6.88□□□□□ -1.31
RFC4-201ENST00000296273 ANGP03950 147 aaKnown RBP6.88□□□□□ -1.31
RFC4-201ENST00000296273 SCGB1C2P0DMR2 95 aa6.88□□□□□ -1.31
RFC4-201ENST00000296273 PSMB2P49721 201 aa6.88□□□□□ -1.31
RFC4-201ENST00000296273 COX17Q14061 63 aa6.88□□□□□ -1.31
RFC4-201ENST00000296273 C6orf226Q5I0X4 101 aa6.88□□□□□ -1.31
RFC4-201ENST00000296273 ARL17AQ8IVW1 177 aa6.88□□□□□ -1.31
RFC4-201ENST00000296273 PRR34Q9NV39 138 aa6.88□□□□□ -1.31
RFC4-201ENST00000296273 IGKV3OR2-268A0A0C4DH90 116 aa6.87□□□□□ -1.31
RFC4-201ENST00000296273 J3QR89 54 aa6.87□□□□□ -1.31
RFC4-201ENST00000296273 C14orf177Q52M58 125 aa6.87□□□□□ -1.31
RFC4-201ENST00000296273 LINC00269Q8N2A0 174 aa6.87□□□□□ -1.31
RFC4-201ENST00000296273 HMCN2Q8NDA2 5059 aa6.87□□□□□ -1.31
RFC4-201ENST00000296273 TRAV13-2A0A0B4J235 113 aa6.86□□□□□ -1.31
RFC4-201ENST00000296273 MALP21145 153 aa6.86□□□□□ -1.31
RFC4-201ENST00000296273 Q1RN00 199 aa6.86□□□□□ -1.31
RFC4-201ENST00000296273 OCIAD2Q56VL3 154 aa6.86□□□□□ -1.31
RFC4-201ENST00000296273 CHCHD10Q8WYQ3 142 aaPredicted RBP6.86□□□□□ -1.31
RFC4-201ENST00000296273 H3BMG7 143 aa6.85□□□□□ -1.31
RFC4-201ENST00000296273 XCL1P47992 114 aa6.85□□□□□ -1.31
RFC4-201ENST00000296273 CKS1BP61024 79 aa6.85□□□□□ -1.31
RFC4-201ENST00000296273 RPL37AP61513 92 aaKnown RBP6.85□□□□□ -1.31
RFC4-201ENST00000296273 ATXN8Q156A1 80 aa6.85□□□□□ -1.31
RFC4-201ENST00000296273 C5orf38Q86SI9 138 aa6.85□□□□□ -1.31
RFC4-201ENST00000296273 TOMM7Q9P0U1 55 aa6.85□□□□□ -1.31
RFC4-201ENST00000296273 KLK12Q9UKR0 248 aa6.85□□□□□ -1.31
RFC4-201ENST00000296273 FAT3Q8TDW7 4589 aa6.85□□□□□ -1.31
RFC4-201ENST00000296273 F8WDY8 70 aa6.84□□□□□ -1.31
RFC4-201ENST00000296273 UBE2WQ96B02 151 aa6.84□□□□□ -1.31
RFC4-201ENST00000296273 LINC01600Q96MT4 127 aa6.84□□□□□ -1.31
RFC4-201ENST00000296273 CRPP02741 224 aa6.83□□□□□ -1.32
RFC4-201ENST00000296273 LINC00158P58513 81 aa6.83□□□□□ -1.32
RFC4-201ENST00000296273 C1orf43Q9BWL3 253 aa6.83□□□□□ -1.32
RFC4-201ENST00000296273 FOXI1Q12951 378 aa6.82□□□□□ -1.32
RFC4-201ENST00000296273 UBR4Q5T4S7 5183 aa6.82□□□□□ -1.32
RFC4-201ENST00000296273 EIF4EBP3O60516 100 aaPredicted RBP6.82□□□□□ -1.32
RFC4-201ENST00000296273 TCL1BO95988 128 aa6.82□□□□□ -1.32
RFC4-201ENST00000296273 RPL13AP40429 203 aaKnown RBP6.82□□□□□ -1.32
RFC4-201ENST00000296273 MIR7-3HGQ8N6C7 128 aa6.82□□□□□ -1.32
RFC4-201ENST00000296273 PRO0461Q9UI25 63 aa6.82□□□□□ -1.32
RFC4-201ENST00000296273 CBY1Q9Y3M2 126 aa6.82□□□□□ -1.32
RFC4-201ENST00000296273 NDUFC2O95298 119 aa6.81□□□□□ -1.32
RFC4-201ENST00000296273 KIAA0087Q14695 138 aa6.81□□□□□ -1.32
RFC4-201ENST00000296273 Q6ZRU5 148 aa6.81□□□□□ -1.32
RFC4-201ENST00000296273 SND1-IT1Q9HBX3 110 aa6.81□□□□□ -1.32
RFC4-201ENST00000296273 GVQW2A0A096LPI5 108 aaPredicted RBP6.8□□□□□ -1.32
RFC4-201ENST00000296273 GAGE12HA6NDE8 117 aa6.8□□□□□ -1.32
RFC4-201ENST00000296273 TRIAP1O43715 76 aa6.8□□□□□ -1.32
RFC4-201ENST00000296273 DAND5Q8N907 189 aa6.8□□□□□ -1.32
RFC4-201ENST00000296273 H7C2G1 150 aa6.79□□□□□ -1.32
RFC4-201ENST00000296273 RPL28P46779 137 aaKnown RBP6.79□□□□□ -1.32
RFC4-201ENST00000296273 NPC2P61916 151 aa6.79□□□□□ -1.32
RFC4-201ENST00000296273 ENHOQ6UWT2 76 aa6.79□□□□□ -1.32
RFC4-201ENST00000296273 SOSTDC1Q6X4U4 206 aa6.79□□□□□ -1.32
RFC4-201ENST00000296273 C9orf163Q8N9P6 203 aa6.79□□□□□ -1.32
RFC4-201ENST00000296273 CARD19Q96LW7 228 aa6.79□□□□□ -1.32
RFC4-201ENST00000296273 TRBV10-2A0A0K0K1G8 114 aa6.78□□□□□ -1.32
RFC4-201ENST00000296273 H0YGX0 51 aa6.78□□□□□ -1.32
RFC4-201ENST00000296273 H3BT86 120 aa6.78□□□□□ -1.32
RFC4-201ENST00000296273 MT1HL1P0DM35 61 aa6.78□□□□□ -1.32
RFC4-201ENST00000296273 CLPSL2Q6UWE3 100 aa6.78□□□□□ -1.32
RFC4-201ENST00000296273 TEN1Q86WV5 123 aa6.78□□□□□ -1.32
RFC4-201ENST00000296273 A0A0U1RRA0 63 aa6.77□□□□□ -1.33
RFC4-201ENST00000296273 USP17L23D6RBM5 183 aa6.77□□□□□ -1.33
RFC4-201ENST00000296273 LST1O00453 97 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms