RNA–Protein interactions for RNA: ENST00000291527.2

TFF1-201, Transcript of trefoil factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TFF1, Length 551 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF1-201ENST00000291527 A0A1B0GWB2 263 aa5.51□□□□□ -1.53
TFF1-201ENST00000291527 GAGE10A6NGK3 116 aa5.51□□□□□ -1.53
TFF1-201ENST00000291527 TIMM17BO60830 172 aa5.51□□□□□ -1.53
TFF1-201ENST00000291527 UBE2D1P51668 147 aa5.51□□□□□ -1.53
TFF1-201ENST00000291527 RPL24P83731 157 aaKnown RBP5.51□□□□□ -1.53
TFF1-201ENST00000291527 A0A096LNI7 61 aa5.5□□□□□ -1.53
TFF1-201ENST00000291527 TRAV8-4A0A0B4J246 113 aa5.5□□□□□ -1.53
TFF1-201ENST00000291527 A0A0J9YXV3 536 aa5.5□□□□□ -1.53
TFF1-201ENST00000291527 A0A0J9YXY3 114 aa5.5□□□□□ -1.53
TFF1-201ENST00000291527 FOXI1Q12951 378 aa5.5□□□□□ -1.53
TFF1-201ENST00000291527 NHP2Q9NX24 153 aaKnown RBP5.5□□□□□ -1.53
TFF1-201ENST00000291527 A0A1W2PPM0 123 aa5.49□□□□□ -1.53
TFF1-201ENST00000291527 IFITM1P13164 125 aa5.49□□□□□ -1.53
TFF1-201ENST00000291527 HERV-K104P63124 156 aa5.49□□□□□ -1.53
TFF1-201ENST00000291527 CHCHD10Q8WYQ3 142 aaPredicted RBP5.49□□□□□ -1.53
TFF1-201ENST00000291527 PPDPFQ9H3Y8 114 aa5.49□□□□□ -1.53
TFF1-201ENST00000291527 H3BUT2 72 aa5.48□□□□□ -1.53
TFF1-201ENST00000291527 K7EP34 96 aa5.48□□□□□ -1.53
TFF1-201ENST00000291527 FXYD2P54710 66 aa5.48□□□□□ -1.53
TFF1-201ENST00000291527 KRTAP10-8P60410 259 aa5.48□□□□□ -1.53
TFF1-201ENST00000291527 PRR3P79522 188 aaKnown RBP5.48□□□□□ -1.53
TFF1-201ENST00000291527 Q6ZUT4 128 aa5.48□□□□□ -1.53
TFF1-201ENST00000291527 LINC01600Q96MT4 127 aa5.48□□□□□ -1.53
TFF1-201ENST00000291527 OPRPNQ99935 248 aaPredicted RBP5.48□□□□□ -1.53
TFF1-201ENST00000291527 CDC42SE2Q9NRR3 84 aa5.48□□□□□ -1.53
TFF1-201ENST00000291527 LINC01561Q8N1V8 128 aa5.47□□□□□ -1.53
TFF1-201ENST00000291527 SPANXDQ9BXN6 97 aa5.47□□□□□ -1.53
TFF1-201ENST00000291527 TTTY13Q9BZ97 58 aa5.47□□□□□ -1.53
TFF1-201ENST00000291527 SPANXCQ9NY87 97 aa5.47□□□□□ -1.53
TFF1-201ENST00000291527 NDUFA12Q9UI09 145 aa5.47□□□□□ -1.53
TFF1-201ENST00000291527 SPCS1Q9Y6A9 102 aa5.47□□□□□ -1.53
TFF1-201ENST00000291527 TRBV20-1A0A075B6N2 111 aa5.46□□□□□ -1.54
TFF1-201ENST00000291527 GVQW2A0A096LPI5 108 aaPredicted RBP5.46□□□□□ -1.54
TFF1-201ENST00000291527 A0A0B4J2C4 111 aa5.46□□□□□ -1.54
TFF1-201ENST00000291527 NDUFA1O15239 70 aa5.46□□□□□ -1.54
TFF1-201ENST00000291527 XCL1P47992 114 aa5.46□□□□□ -1.54
TFF1-201ENST00000291527 RAB37Q96AX2 223 aa5.46□□□□□ -1.54
TFF1-201ENST00000291527 IGLV5-39A0A0G2JS06 123 aa5.45□□□□□ -1.54
TFF1-201ENST00000291527 LINC00959A0A1B0GUT2 108 aa5.45□□□□□ -1.54
TFF1-201ENST00000291527 A0A1W2PNN7 141 aa5.45□□□□□ -1.54
TFF1-201ENST00000291527 SS18Q15532 418 aa5.45□□□□□ -1.54
TFF1-201ENST00000291527 LINC00242Q5T6M2 205 aa5.45□□□□□ -1.54
TFF1-201ENST00000291527 FAM104AQ969W3 186 aa5.45□□□□□ -1.54
TFF1-201ENST00000291527 F8W1H4 67 aa5.44□□□□□ -1.54
TFF1-201ENST00000291527 K7ERU9 68 aa5.44□□□□□ -1.54
TFF1-201ENST00000291527 RNASE13Q5GAN3 156 aaKnown RBP5.44□□□□□ -1.54
TFF1-201ENST00000291527 CDKN2A-AS1Q9UH64 79 aa5.44□□□□□ -1.54
TFF1-201ENST00000291527 PRO1854Q9UHT4 67 aa5.44□□□□□ -1.54
TFF1-201ENST00000291527 TRAV13-1A0A0B4J241 112 aa5.43□□□□□ -1.54
TFF1-201ENST00000291527 J3QR89 54 aa5.43□□□□□ -1.54
TFF1-201ENST00000291527 COX6CP09669 75 aa5.43□□□□□ -1.54
TFF1-201ENST00000291527 SPINK8P0C7L1 97 aa5.43□□□□□ -1.54
TFF1-201ENST00000291527 TSPEAR-AS2P59090 65 aa5.43□□□□□ -1.54
TFF1-201ENST00000291527 CFAP161Q6P656 301 aa5.43□□□□□ -1.54
TFF1-201ENST00000291527 KRTAP11-1Q8IUC1 163 aa5.43□□□□□ -1.54
TFF1-201ENST00000291527 C7orf33Q8WU49 177 aa5.43□□□□□ -1.54
TFF1-201ENST00000291527 PRSS2P07478 247 aa5.42□□□□□ -1.54
TFF1-201ENST00000291527 ERG28Q9UKR5 140 aa5.42□□□□□ -1.54
TFF1-201ENST00000291527 MUC2Q02817 5179 aa5.42□□□□□ -1.54
TFF1-201ENST00000291527 A0A087WZ39 114 aa5.41□□□□□ -1.54
TFF1-201ENST00000291527 SMIM1B2RUZ4 78 aa5.41□□□□□ -1.54
TFF1-201ENST00000291527 APOMO95445 188 aa5.41□□□□□ -1.54
TFF1-201ENST00000291527 CXCL5P42830 114 aa5.41□□□□□ -1.54
TFF1-201ENST00000291527 CARD19Q96LW7 228 aa5.41□□□□□ -1.54
TFF1-201ENST00000291527 A4D1N5 150 aa5.4□□□□□ -1.54
TFF1-201ENST00000291527 K7ERJ3 54 aa5.4□□□□□ -1.54
TFF1-201ENST00000291527 CFC1BP0CG36 223 aa5.4□□□□□ -1.54
TFF1-201ENST00000291527 CFC1P0CG37 223 aa5.4□□□□□ -1.54
TFF1-201ENST00000291527 SYCNQ0VAF6 134 aa5.4□□□□□ -1.54
TFF1-201ENST00000291527 GAGE2BQ13066 116 aa5.4□□□□□ -1.54
TFF1-201ENST00000291527 MEIG1Q5JSS6 88 aa5.4□□□□□ -1.54
TFF1-201ENST00000291527 PHF5AQ7RTV0 110 aaKnown RBP5.4□□□□□ -1.54
TFF1-201ENST00000291527 MUSTN1Q8IVN3 82 aa5.4□□□□□ -1.54
TFF1-201ENST00000291527 COX7B2Q8TF08 81 aa5.4□□□□□ -1.54
TFF1-201ENST00000291527 IGHV3OR16-9A0A0B4J2B5 98 aa5.39□□□□□ -1.55
TFF1-201ENST00000291527 LOC107984156A0A0G2JMH3 177 aa5.39□□□□□ -1.55
TFF1-201ENST00000291527 TSPAN13O95857 204 aa5.39□□□□□ -1.55
TFF1-201ENST00000291527 SCGB1C2P0DMR2 95 aa5.39□□□□□ -1.55
TFF1-201ENST00000291527 Q1RN00 199 aa5.39□□□□□ -1.55
TFF1-201ENST00000291527 SPINK6Q6UWN8 80 aa5.39□□□□□ -1.55
TFF1-201ENST00000291527 C5orf38Q86SI9 138 aa5.39□□□□□ -1.55
TFF1-201ENST00000291527 ARL17AQ8IVW1 177 aa5.39□□□□□ -1.55
TFF1-201ENST00000291527 ZNF625Q96I27 306 aaPredicted RBP5.39□□□□□ -1.55
TFF1-201ENST00000291527 LITAFQ99732 161 aa5.39□□□□□ -1.55
TFF1-201ENST00000291527 PSORS1C2Q9UIG4 136 aa5.39□□□□□ -1.55
TFF1-201ENST00000291527 TRBV30A0A0K0K1B3 111 aa5.38□□□□□ -1.55
TFF1-201ENST00000291527 FAM168BA1KXE4 195 aa5.38□□□□□ -1.55
TFF1-201ENST00000291527 M0QXV9 152 aa5.38□□□□□ -1.55
TFF1-201ENST00000291527 PSMB2P49721 201 aa5.38□□□□□ -1.55
TFF1-201ENST00000291527 CD164L2Q6UWJ8 174 aa5.38□□□□□ -1.55
TFF1-201ENST00000291527 KRTAP7-1Q8IUC3 87 aa5.38□□□□□ -1.55
TFF1-201ENST00000291527 Q8IZM0 81 aa5.38□□□□□ -1.55
TFF1-201ENST00000291527 CBY1Q9Y3M2 126 aa5.38□□□□□ -1.55
TFF1-201ENST00000291527 TRAV13-2A0A0B4J235 113 aa5.37□□□□□ -1.55
TFF1-201ENST00000291527 COX17Q14061 63 aa5.37□□□□□ -1.55
TFF1-201ENST00000291527 ATXN8Q156A1 80 aa5.37□□□□□ -1.55
TFF1-201ENST00000291527 OCIAD2Q56VL3 154 aa5.37□□□□□ -1.55
TFF1-201ENST00000291527 C9orf116Q5BN46 136 aaPredicted RBP5.37□□□□□ -1.55
TFF1-201ENST00000291527 C6orf226Q5I0X4 101 aa5.37□□□□□ -1.55
TFF1-201ENST00000291527 C10orf25Q5T742 122 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms