RNA–Protein interactions for RNA: ENST00000287766.8

SLC6A1-201, Transcript of solute carrier family 6 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A1, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-201ENST00000287766 PRYO14603 147 aa8.93□□□□□ -0.98
SLC6A1-201ENST00000287766 ZNF575Q86XF7 245 aa8.93□□□□□ -0.98
SLC6A1-201ENST00000287766 ZNF73O43830 326 aaPredicted RBP8.93□□□□□ -0.98
SLC6A1-201ENST00000287766 CRYGAP11844 174 aa8.93□□□□□ -0.98
SLC6A1-201ENST00000287766 CD164L2Q6UWJ8 174 aa8.92□□□□□ -0.98
SLC6A1-201ENST00000287766 A8MTW9 85 aa8.92□□□□□ -0.98
SLC6A1-201ENST00000287766 Q8N9L7 120 aa8.92□□□□□ -0.98
SLC6A1-201ENST00000287766 LYRM9A8MSI8 78 aa8.91□□□□□ -0.98
SLC6A1-201ENST00000287766 Q8N2B8 174 aa8.91□□□□□ -0.98
SLC6A1-201ENST00000287766 IGHV4-30-4P0DP06 118 aa8.91□□□□□ -0.98
SLC6A1-201ENST00000287766 UNQ6190/PRO20217Q6UXQ8 127 aa8.91□□□□□ -0.98
SLC6A1-201ENST00000287766 ITPR1Q14643 2758 aa8.9□□□□□ -0.98
SLC6A1-201ENST00000287766 ATRQ13535 2644 aa8.9□□□□□ -0.98
SLC6A1-201ENST00000287766 CASC2Q6XLA1 102 aa8.9□□□□□ -0.98
SLC6A1-201ENST00000287766 C11orf72Q8NBR9 251 aa8.9□□□□□ -0.98
SLC6A1-201ENST00000287766 LINC00337Q8N6G1 96 aa8.9□□□□□ -0.98
SLC6A1-201ENST00000287766 Q6ZVQ6 151 aa8.9□□□□□ -0.99
SLC6A1-201ENST00000287766 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.89□□□□□ -0.99
SLC6A1-201ENST00000287766 RPL37AP8A6NKH3 93 aa8.89□□□□□ -0.99
SLC6A1-201ENST00000287766 CYSRT1A8MQ03 144 aa8.88□□□□□ -0.99
SLC6A1-201ENST00000287766 BEAN1Q3B7T3 259 aa8.88□□□□□ -0.99
SLC6A1-201ENST00000287766 SYCNQ0VAF6 134 aa8.88□□□□□ -0.99
SLC6A1-201ENST00000287766 ESRGQ1W209 222 aa8.88□□□□□ -0.99
SLC6A1-201ENST00000287766 RPS28P62857 69 aaKnown RBP8.88□□□□□ -0.99
SLC6A1-201ENST00000287766 ASH1LQ9NR48 2969 aaKnown RBP8.87□□□□□ -0.99
SLC6A1-201ENST00000287766 RELNP78509 3460 aa8.87□□□□□ -0.99
SLC6A1-201ENST00000287766 A0A087WZ39 114 aa8.87□□□□□ -0.99
SLC6A1-201ENST00000287766 TRBV10-3A0A0K0K1G6 114 aa8.87□□□□□ -0.99
SLC6A1-201ENST00000287766 LINC01547P58512 204 aaPredicted RBP8.87□□□□□ -0.99
SLC6A1-201ENST00000287766 LINC00575Q6W349 94 aa8.86□□□□□ -0.99
SLC6A1-201ENST00000287766 Q8IZM0 81 aa8.86□□□□□ -0.99
SLC6A1-201ENST00000287766 IGSF10Q6WRI0 2623 aa8.86□□□□□ -0.99
SLC6A1-201ENST00000287766 M0R378 163 aa8.86□□□□□ -0.99
SLC6A1-201ENST00000287766 KLK9Q2XQG4 91 aa8.86□□□□□ -0.99
SLC6A1-201ENST00000287766 SPINK6Q6UWN8 80 aa8.86□□□□□ -0.99
SLC6A1-201ENST00000287766 TEX15Q9BXT5 2789 aa8.86□□□□□ -0.99
SLC6A1-201ENST00000287766 LY6G6DO95868 133 aa8.85□□□□□ -0.99
SLC6A1-201ENST00000287766 IGLV1-51P01701 117 aa8.85□□□□□ -0.99
SLC6A1-201ENST00000287766 FHL3Q13643 280 aa8.84□□□□□ -0.99
SLC6A1-201ENST00000287766 FHL2Q14192 279 aa8.84□□□□□ -0.99
SLC6A1-201ENST00000287766 B9D2Q9BPU9 175 aa8.84□□□□□ -0.99
SLC6A1-201ENST00000287766 SBSPONQ8IVN8 264 aa8.83□□□□□ -1
SLC6A1-201ENST00000287766 EIF4EBP3O60516 100 aaPredicted RBP8.83□□□□□ -1
SLC6A1-201ENST00000287766 NHLRC4P0CG21 123 aaPredicted RBP8.83□□□□□ -1
SLC6A1-201ENST00000287766 NBEAL2Q6ZNJ1 2754 aa8.82□□□□□ -1
SLC6A1-201ENST00000287766 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.82□□□□□ -1
SLC6A1-201ENST00000287766 GCN1Q92616 2671 aaKnown RBP8.82□□□□□ -1
SLC6A1-201ENST00000287766 DEFB116Q30KQ4 102 aa8.82□□□□□ -1
SLC6A1-201ENST00000287766 C1orf137Q5JT78 98 aa8.82□□□□□ -1
SLC6A1-201ENST00000287766 FAM218AQ96MZ4 157 aa8.82□□□□□ -1
SLC6A1-201ENST00000287766 COX17Q14061 63 aa8.81□□□□□ -1
SLC6A1-201ENST00000287766 PCOTHQ58A44 107 aa8.81□□□□□ -1
SLC6A1-201ENST00000287766 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.81□□□□□ -1
SLC6A1-201ENST00000287766 MUC7Q8TAX7 377 aa8.81□□□□□ -1
SLC6A1-201ENST00000287766 ZANQ9Y493 2812 aa8.8□□□□□ -1
SLC6A1-201ENST00000287766 HELZ2Q9BYK8 2649 aaKnown RBP8.8□□□□□ -1
SLC6A1-201ENST00000287766 MGAM2Q2M2H8 2515 aa8.79□□□□□ -1
SLC6A1-201ENST00000287766 DHRS4-AS1Q9P1J3 65 aa8.79□□□□□ -1
SLC6A1-201ENST00000287766 OXLD1Q5BKU9 147 aa8.79□□□□□ -1
SLC6A1-201ENST00000287766 K7ERS5 55 aa8.77□□□□□ -1
SLC6A1-201ENST00000287766 C4orf48Q5BLP8 95 aa8.77□□□□□ -1
SLC6A1-201ENST00000287766 IGLV5-39A0A0G2JS06 123 aa8.77□□□□□ -1.01
SLC6A1-201ENST00000287766 C6orf223Q8N319 242 aa8.77□□□□□ -1.01
SLC6A1-201ENST00000287766 DEFB131BA0A096LNP1 70 aa8.76□□□□□ -1.01
SLC6A1-201ENST00000287766 C11orf45Q8TAV5 145 aa8.76□□□□□ -1.01
SLC6A1-201ENST00000287766 LITAFQ99732 161 aa8.75□□□□□ -1.01
SLC6A1-201ENST00000287766 TEP1Q99973 2627 aaKnown RBP8.73□□□□□ -1.01
SLC6A1-201ENST00000287766 A0A087WSZ3 146 aa8.73□□□□□ -1.01
SLC6A1-201ENST00000287766 IGHV3OR16-9A0A0B4J2B5 98 aa8.73□□□□□ -1.01
SLC6A1-201ENST00000287766 LELP1Q5T871 98 aa8.73□□□□□ -1.01
SLC6A1-201ENST00000287766 TRAV10A0A0B4J240 114 aa8.73□□□□□ -1.01
SLC6A1-201ENST00000287766 KPRPQ5T749 579 aaPredicted RBP8.73□□□□□ -1.01
SLC6A1-201ENST00000287766 SMCR5Q8TEV8 140 aa8.73□□□□□ -1.01
SLC6A1-201ENST00000287766 MAST4O15021 2626 aa8.72□□□□□ -1.01
SLC6A1-201ENST00000287766 TM2D3Q9BRN9 247 aa8.72□□□□□ -1.01
SLC6A1-201ENST00000287766 CRYBG3Q68DQ2 2970 aa8.72□□□□□ -1.01
SLC6A1-201ENST00000287766 IGLV9-49A0A0B4J1Y8 123 aa8.72□□□□□ -1.01
SLC6A1-201ENST00000287766 HRNRQ86YZ3 2850 aaPredicted RBP8.71□□□□□ -1.01
SLC6A1-201ENST00000287766 FSHBP01225 129 aa8.71□□□□□ -1.01
SLC6A1-201ENST00000287766 LINC00336Q6ZUF6 198 aa8.71□□□□□ -1.02
SLC6A1-201ENST00000287766 SPATA3Q8NHX4 192 aa8.71□□□□□ -1.02
SLC6A1-201ENST00000287766 H0Y9P7 68 aa8.71□□□□□ -1.02
SLC6A1-201ENST00000287766 CXCL6P80162 114 aa8.71□□□□□ -1.02
SLC6A1-201ENST00000287766 SMIM29Q86T20 159 aa8.71□□□□□ -1.02
SLC6A1-201ENST00000287766 SMG1Q96Q15 3661 aaKnown RBP8.7□□□□□ -1.02
SLC6A1-201ENST00000287766 A0A096LNT2 108 aa8.7□□□□□ -1.02
SLC6A1-201ENST00000287766 IGLV5-45A0A087WSX0 123 aa8.7□□□□□ -1.02
SLC6A1-201ENST00000287766 LINC00474Q9P2X8 69 aa8.7□□□□□ -1.02
SLC6A1-201ENST00000287766 UBR5O95071 2799 aaPredicted RBP8.69□□□□□ -1.02
SLC6A1-201ENST00000287766 EGFEM1PQ0D2K5 195 aa8.69□□□□□ -1.02
SLC6A1-201ENST00000287766 DCHS2Q6V1P9 2916 aa8.68□□□□□ -1.02
SLC6A1-201ENST00000287766 UTP20O75691 2785 aaKnown RBP8.67□□□□□ -1.02
SLC6A1-201ENST00000287766 C16orf95Q9H693 158 aa8.67□□□□□ -1.02
SLC6A1-201ENST00000287766 C10orf25Q5T742 122 aa8.66□□□□□ -1.02
SLC6A1-201ENST00000287766 LINC01561Q8N1V8 128 aa8.66□□□□□ -1.02
SLC6A1-201ENST00000287766 SETXQ7Z333 2677 aaKnown RBP8.66□□□□□ -1.02
SLC6A1-201ENST00000287766 HCG22E2RYF7 251 aa8.65□□□□□ -1.02
SLC6A1-201ENST00000287766 Q6ZTC4 211 aa8.65□□□□□ -1.02
SLC6A1-201ENST00000287766 LIMD2Q9BT23 127 aa8.65□□□□□ -1.03
SLC6A1-201ENST00000287766 CSMD1Q96PZ7 3565 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms