RNA–Protein interactions for RNA: ENST00000273960.7

HERC6-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 1 (best) BASIC

Gene HERC6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-202ENST00000273960 Q6ZVQ6 151 aa8.9□□□□□ -0.99
HERC6-202ENST00000273960 TRBV10-1A0A0K0K1A3 114 aa8.89□□□□□ -0.99
HERC6-202ENST00000273960 CCL24O00175 119 aa8.89□□□□□ -0.99
HERC6-202ENST00000273960 FAM229BQ4G0N7 80 aa8.89□□□□□ -0.99
HERC6-202ENST00000273960 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.89□□□□□ -0.99
HERC6-202ENST00000273960 A0A087WZ39 114 aa8.88□□□□□ -0.99
HERC6-202ENST00000273960 NANOS2P60321 138 aaKnown RBP8.88□□□□□ -0.99
HERC6-202ENST00000273960 Q6ZQY7 126 aa8.88□□□□□ -0.99
HERC6-202ENST00000273960 SMIM26A0A096LP01 95 aa8.88□□□□□ -0.99
HERC6-202ENST00000273960 ODF3L2Q3SX64 289 aa8.88□□□□□ -0.99
HERC6-202ENST00000273960 LINC00959A0A1B0GUT2 108 aa8.87□□□□□ -0.99
HERC6-202ENST00000273960 NDUFC2-KCTD14E9PQ53 114 aa8.87□□□□□ -0.99
HERC6-202ENST00000273960 Q8NDZ9 215 aa8.86□□□□□ -0.99
HERC6-202ENST00000273960 C1orf195Q5TG92 126 aa8.86□□□□□ -0.99
HERC6-202ENST00000273960 ATP5EP2Q5VTU8 51 aa8.86□□□□□ -0.99
HERC6-202ENST00000273960 TRBV6-8A0A0A6YYG3 113 aa8.85□□□□□ -0.99
HERC6-202ENST00000273960 DEFB114Q30KQ6 69 aa8.85□□□□□ -0.99
HERC6-202ENST00000273960 C16orf95Q9H693 158 aa8.85□□□□□ -0.99
HERC6-202ENST00000273960 Q6ZQT0 140 aa8.84□□□□□ -0.99
HERC6-202ENST00000273960 MIFP14174 115 aa8.84□□□□□ -0.99
HERC6-202ENST00000273960 C6orf223Q8N319 242 aa8.84□□□□□ -1
HERC6-202ENST00000273960 ZNF469Q96JG9 3925 aaPredicted RBP8.83□□□□□ -1
HERC6-202ENST00000273960 PRR4Q16378 134 aa8.83□□□□□ -1
HERC6-202ENST00000273960 LINC00482Q8N8I6 264 aa8.83□□□□□ -1
HERC6-202ENST00000273960 XAGE1AQ9HD64 81 aa8.83□□□□□ -1
HERC6-202ENST00000273960 LINC01006Q8NI28 216 aa8.82□□□□□ -1
HERC6-202ENST00000273960 C4orf3Q8WVX3 66 aa8.82□□□□□ -1
HERC6-202ENST00000273960 MAST4O15021 2626 aa8.82□□□□□ -1
HERC6-202ENST00000273960 IGHV4-28A0A0C4DH34 117 aa8.82□□□□□ -1
HERC6-202ENST00000273960 CELA1Q9UNI1 258 aa8.82□□□□□ -1
HERC6-202ENST00000273960 V9GYY9 64 aa8.82□□□□□ -1
HERC6-202ENST00000273960 NREPQ16612 68 aa8.81□□□□□ -1
HERC6-202ENST00000273960 GYPEP15421 78 aa8.81□□□□□ -1
HERC6-202ENST00000273960 FAM19A3Q7Z5A8 133 aa8.81□□□□□ -1
HERC6-202ENST00000273960 DEFB4AO15263 64 aa8.81□□□□□ -1
HERC6-202ENST00000273960 KRTAP1-3Q8IUG1 177 aa8.81□□□□□ -1
HERC6-202ENST00000273960 BPY2O14599 106 aa8.8□□□□□ -1
HERC6-202ENST00000273960 SEC61GP60059 68 aa8.8□□□□□ -1
HERC6-202ENST00000273960 ANGP03950 147 aaKnown RBP8.79□□□□□ -1
HERC6-202ENST00000273960 KLKP1Q107X0 134 aa8.79□□□□□ -1
HERC6-202ENST00000273960 LINC00575Q6W349 94 aa8.79□□□□□ -1
HERC6-202ENST00000273960 TMEM254Q8TBM7 123 aa8.79□□□□□ -1
HERC6-202ENST00000273960 C3orf84H3BNL1 204 aa8.79□□□□□ -1
HERC6-202ENST00000273960 LY6G6DO95868 133 aa8.79□□□□□ -1
HERC6-202ENST00000273960 C10orf25Q5T742 122 aa8.79□□□□□ -1
HERC6-202ENST00000273960 UNQ6190/PRO20217Q6UXQ8 127 aa8.79□□□□□ -1
HERC6-202ENST00000273960 INAFM1C9JVW0 142 aa8.79□□□□□ -1
HERC6-202ENST00000273960 FSHBP01225 129 aa8.78□□□□□ -1
HERC6-202ENST00000273960 HIGD2AQ9BW72 106 aa8.78□□□□□ -1
HERC6-202ENST00000273960 ZNF561-AS1K7EIQ3 104 aa8.78□□□□□ -1
HERC6-202ENST00000273960 IL17DQ8TAD2 202 aa8.77□□□□□ -1.01
HERC6-202ENST00000273960 DEFB105AQ8NG35 78 aa8.77□□□□□ -1.01
HERC6-202ENST00000273960 MUC7Q8TAX7 377 aa8.76□□□□□ -1.01
HERC6-202ENST00000273960 HIVEP1P15822 2718 aa8.76□□□□□ -1.01
HERC6-202ENST00000273960 OTOGQ6ZRI0 2925 aa8.76□□□□□ -1.01
HERC6-202ENST00000273960 TRBV10-3A0A0K0K1G6 114 aa8.75□□□□□ -1.01
HERC6-202ENST00000273960 PSPHP1O15172 72 aa8.75□□□□□ -1.01
HERC6-202ENST00000273960 HTN3P15516 51 aa8.75□□□□□ -1.01
HERC6-202ENST00000273960 FUSP35637 526 aaKnown RBP eCLIP8.75□□□□□ -1.01
HERC6-202ENST00000273960 FAM30AQ9NZY2 134 aa8.75□□□□□ -1.01
HERC6-202ENST00000273960 STAB1Q9NY15 2570 aa8.75□□□□□ -1.01
HERC6-202ENST00000273960 NOTCH1P46531 2555 aa8.74□□□□□ -1.01
HERC6-202ENST00000273960 CHCHD10Q8WYQ3 142 aaPredicted RBP8.74□□□□□ -1.01
HERC6-202ENST00000273960 Q8IZM0 81 aa8.73□□□□□ -1.01
HERC6-202ENST00000273960 LINC00167Q96N53 147 aa8.73□□□□□ -1.01
HERC6-202ENST00000273960 VWFP04275 2813 aa8.73□□□□□ -1.01
HERC6-202ENST00000273960 KLK12Q9UKR0 248 aa8.72□□□□□ -1.01
HERC6-202ENST00000273960 TRBV7-4A0A0J9YYF1 115 aa8.71□□□□□ -1.01
HERC6-202ENST00000273960 PLAC8L1A1L4L8 177 aa8.71□□□□□ -1.02
HERC6-202ENST00000273960 EPM2AB3EWF7 344 aa8.71□□□□□ -1.02
HERC6-202ENST00000273960 GIG44P09565 113 aaPredicted RBP8.71□□□□□ -1.02
HERC6-202ENST00000273960 NSD1Q96L73 2696 aaPredicted RBP8.7□□□□□ -1.02
HERC6-202ENST00000273960 PRYO14603 147 aa8.7□□□□□ -1.02
HERC6-202ENST00000273960 C16orf74Q96GX8 76 aa8.7□□□□□ -1.02
HERC6-202ENST00000273960 F8WDY8 70 aa8.7□□□□□ -1.02
HERC6-202ENST00000273960 SPAG11BQ08648 103 aa8.7□□□□□ -1.02
HERC6-202ENST00000273960 TENM1Q9UKZ4 2725 aa8.69□□□□□ -1.02
HERC6-202ENST00000273960 PDZD2O15018 2839 aa8.69□□□□□ -1.02
HERC6-202ENST00000273960 REG3AQ06141 175 aa8.68□□□□□ -1.02
HERC6-202ENST00000273960 KIAA0087Q14695 138 aa8.68□□□□□ -1.02
HERC6-202ENST00000273960 ESRGQ1W209 222 aa8.68□□□□□ -1.02
HERC6-202ENST00000273960 COL6A5A8TX70 2615 aa8.68□□□□□ -1.02
HERC6-202ENST00000273960 NBEAL1Q6ZS30 2694 aa8.68□□□□□ -1.02
HERC6-202ENST00000273960 CYSRT1A8MQ03 144 aa8.68□□□□□ -1.02
HERC6-202ENST00000273960 CD164L2Q6UWJ8 174 aa8.68□□□□□ -1.02
HERC6-202ENST00000273960 LOC110117498A0A087WWA1 95 aa8.67□□□□□ -1.02
HERC6-202ENST00000273960 KRTAP1-1Q07627 177 aa8.67□□□□□ -1.02
HERC6-202ENST00000273960 HIGD2BQ4VC39 106 aa8.67□□□□□ -1.02
HERC6-202ENST00000273960 DIRC1Q969H9 104 aa8.67□□□□□ -1.02
HERC6-202ENST00000273960 CXCL6P80162 114 aa8.66□□□□□ -1.02
HERC6-202ENST00000273960 NDUFC1O43677 76 aa8.66□□□□□ -1.02
HERC6-202ENST00000273960 BAHCC1Q9P281 2608 aa8.65□□□□□ -1.02
HERC6-202ENST00000273960 MGAM2Q2M2H8 2515 aa8.65□□□□□ -1.02
HERC6-202ENST00000273960 DEFB135Q30KP9 77 aa8.65□□□□□ -1.02
HERC6-202ENST00000273960 COX7BP24311 80 aa8.64□□□□□ -1.03
HERC6-202ENST00000273960 ZNF73O43830 326 aaPredicted RBP8.63□□□□□ -1.03
HERC6-202ENST00000273960 SMIM29Q86T20 159 aa8.63□□□□□ -1.03
HERC6-202ENST00000273960 A8MU10 97 aa8.63□□□□□ -1.03
HERC6-202ENST00000273960 DEFB116Q30KQ4 102 aa8.63□□□□□ -1.03
HERC6-202ENST00000273960 IGKV4-1P06312 121 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms