RNA–Protein interactions for RNA: ENST00000268049.11

USP3-201, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5 BASIC

Gene USP3, Length 5,311 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-201ENST00000268049 Q8N814 137 aa5.55□□□□□ -1.52
USP3-201ENST00000268049 XAGE1AQ9HD64 81 aa5.55□□□□□ -1.52
USP3-201ENST00000268049 IGIPA6NJ69 53 aa5.55□□□□□ -1.52
USP3-201ENST00000268049 TET2Q6N021 2002 aaPredicted RBP5.54□□□□□ -1.52
USP3-201ENST00000268049 IGKV2-28A0A075B6P5 120 aa5.54□□□□□ -1.52
USP3-201ENST00000268049 IGKV2D-28P01615 120 aa5.54□□□□□ -1.52
USP3-201ENST00000268049 SMCPP49901 116 aaPredicted RBP5.54□□□□□ -1.52
USP3-201ENST00000268049 TSPEAR-AS2P59090 65 aa5.54□□□□□ -1.52
USP3-201ENST00000268049 PRO0461Q9UI25 63 aa5.54□□□□□ -1.52
USP3-201ENST00000268049 TRIOO75962 3097 aa5.54□□□□□ -1.52
USP3-201ENST00000268049 BCE1O60756 84 aa5.54□□□□□ -1.52
USP3-201ENST00000268049 TYMSOSQ8TAI1 123 aa5.54□□□□□ -1.52
USP3-201ENST00000268049 CNFNQ9BYD5 112 aa5.53□□□□□ -1.52
USP3-201ENST00000268049 COL27A1Q8IZC6 1860 aaPredicted RBP5.53□□□□□ -1.52
USP3-201ENST00000268049 hDV103S1A0JD37 113 aa5.53□□□□□ -1.52
USP3-201ENST00000268049 LINC01547P58512 204 aaPredicted RBP5.53□□□□□ -1.52
USP3-201ENST00000268049 LINC00315P59091 139 aa5.53□□□□□ -1.52
USP3-201ENST00000268049 SPAG11AQ6PDA7 123 aa5.53□□□□□ -1.52
USP3-201ENST00000268049 Q6ZVQ6 151 aa5.53□□□□□ -1.52
USP3-201ENST00000268049 ZNF73O43830 326 aaPredicted RBP5.53□□□□□ -1.52
USP3-201ENST00000268049 A0A096LNJ9 63 aa5.52□□□□□ -1.53
USP3-201ENST00000268049 A0A096LNT2 108 aa5.52□□□□□ -1.53
USP3-201ENST00000268049 KLLNB2CW77 178 aa5.52□□□□□ -1.53
USP3-201ENST00000268049 COX6A2Q02221 97 aa5.52□□□□□ -1.53
USP3-201ENST00000268049 TANC2Q9HCD6 1990 aa5.52□□□□□ -1.53
USP3-201ENST00000268049 Q8IZM0 81 aa5.52□□□□□ -1.53
USP3-201ENST00000268049 RPL37AP8A6NKH3 93 aa5.51□□□□□ -1.53
USP3-201ENST00000268049 ADAMTSL4-AS1Q5T5F5 129 aa5.51□□□□□ -1.53
USP3-201ENST00000268049 FAM19A4Q96LR4 140 aa5.51□□□□□ -1.53
USP3-201ENST00000268049 LOC100131303A0A0U1RQF7 123 aa5.51□□□□□ -1.53
USP3-201ENST00000268049 FHL2Q14192 279 aa5.51□□□□□ -1.53
USP3-201ENST00000268049 COL6A3P12111 3177 aa5.51□□□□□ -1.53
USP3-201ENST00000268049 AKAP13Q12802 2813 aa5.51□□□□□ -1.53
USP3-201ENST00000268049 RNASE3P12724 160 aaKnown RBP5.5□□□□□ -1.53
USP3-201ENST00000268049 C11orf21Q9P2W6 132 aa5.5□□□□□ -1.53
USP3-201ENST00000268049 C8orf87E5RJ46 101 aa5.5□□□□□ -1.53
USP3-201ENST00000268049 H0Y9P7 68 aa5.5□□□□□ -1.53
USP3-201ENST00000268049 PCOTHQ58A44 107 aa5.5□□□□□ -1.53
USP3-201ENST00000268049 KRTAP1-3Q8IUG1 177 aa5.5□□□□□ -1.53
USP3-201ENST00000268049 KIF25-AS1Q9Y6Z4 181 aa5.5□□□□□ -1.53
USP3-201ENST00000268049 MGAQ8IWI9 3026 aa5.5□□□□□ -1.53
USP3-201ENST00000268049 DSPP15924 2871 aaKnown RBP5.49□□□□□ -1.53
USP3-201ENST00000268049 CENPEQ02224 2701 aa5.49□□□□□ -1.53
USP3-201ENST00000268049 CYSRT1A8MQ03 144 aa5.49□□□□□ -1.53
USP3-201ENST00000268049 BAHCC1Q9P281 2608 aa5.49□□□□□ -1.53
USP3-201ENST00000268049 HCG22E2RYF7 251 aa5.49□□□□□ -1.53
USP3-201ENST00000268049 ATP11AUNQ6ZP68 121 aa5.49□□□□□ -1.53
USP3-201ENST00000268049 LINC00575Q6W349 94 aa5.48□□□□□ -1.53
USP3-201ENST00000268049 IGSF10Q6WRI0 2623 aa5.48□□□□□ -1.53
USP3-201ENST00000268049 KRTAP21-3Q3LHN1 58 aa5.48□□□□□ -1.53
USP3-201ENST00000268049 LINC01561Q8N1V8 128 aa5.48□□□□□ -1.53
USP3-201ENST00000268049 ITPR3Q14573 2671 aa5.47□□□□□ -1.53
USP3-201ENST00000268049 SMIM1B2RUZ4 78 aa5.47□□□□□ -1.53
USP3-201ENST00000268049 LINC00242Q5T6M2 205 aa5.47□□□□□ -1.53
USP3-201ENST00000268049 C9orf116Q5BN46 136 aaPredicted RBP5.47□□□□□ -1.53
USP3-201ENST00000268049 PRR9Q5T870 116 aa5.47□□□□□ -1.53
USP3-201ENST00000268049 WDFY4Q6ZS81 3184 aa5.46□□□□□ -1.53
USP3-201ENST00000268049 FLNAP21333 2647 aaKnown RBP5.46□□□□□ -1.53
USP3-201ENST00000268049 A0A1B0GUV1 79 aa5.46□□□□□ -1.54
USP3-201ENST00000268049 PRM2P04554 102 aa5.46□□□□□ -1.54
USP3-201ENST00000268049 Q9UF83 564 aa5.46□□□□□ -1.54
USP3-201ENST00000268049 XIRP2A4UGR9 3374 aa5.46□□□□□ -1.54
USP3-201ENST00000268049 CHD6Q8TD26 2715 aa5.45□□□□□ -1.54
USP3-201ENST00000268049 WIPF1O43516 503 aa5.45□□□□□ -1.54
USP3-201ENST00000268049 CDC42SE2Q9NRR3 84 aa5.45□□□□□ -1.54
USP3-201ENST00000268049 KRTAP1-1Q07627 177 aa5.44□□□□□ -1.54
USP3-201ENST00000268049 C1orf64Q8NEQ6 169 aa5.44□□□□□ -1.54
USP3-201ENST00000268049 LINC00476Q8WZB0 136 aa5.44□□□□□ -1.54
USP3-201ENST00000268049 SMIM29Q86T20 159 aa5.44□□□□□ -1.54
USP3-201ENST00000268049 TM2D3Q9BRN9 247 aa5.44□□□□□ -1.54
USP3-201ENST00000268049 A0A1B0GU69 56 aa5.44□□□□□ -1.54
USP3-201ENST00000268049 SPACA4Q8TDM5 124 aa5.44□□□□□ -1.54
USP3-201ENST00000268049 Q9BRP9 147 aa5.43□□□□□ -1.54
USP3-201ENST00000268049 CASC10Q5T4H9 136 aa5.43□□□□□ -1.54
USP3-201ENST00000268049 KTN1-AS1Q86SY8 53 aa5.43□□□□□ -1.54
USP3-201ENST00000268049 AMELXQ99217 191 aa5.43□□□□□ -1.54
USP3-201ENST00000268049 RETNLBQ9BQ08 111 aa5.43□□□□□ -1.54
USP3-201ENST00000268049 C19orf73Q9NVV2 129 aa5.42□□□□□ -1.54
USP3-201ENST00000268049 LINC00588Q9Y4M8 146 aa5.42□□□□□ -1.54
USP3-201ENST00000268049 PRR3P79522 188 aaKnown RBP5.42□□□□□ -1.54
USP3-201ENST00000268049 SPINT4Q6UDR6 99 aa5.41□□□□□ -1.54
USP3-201ENST00000268049 A8MUN3 132 aa5.41□□□□□ -1.54
USP3-201ENST00000268049 CYP4F30PQ9H0H9 118 aa5.41□□□□□ -1.54
USP3-201ENST00000268049 LCA10Q71F78 164 aa5.4□□□□□ -1.54
USP3-201ENST00000268049 LINC00528Q8N1L1 170 aa5.4□□□□□ -1.54
USP3-201ENST00000268049 C7orf65Q6ZTY9 151 aa5.4□□□□□ -1.55
USP3-201ENST00000268049 BPTFQ12830 3046 aa5.4□□□□□ -1.55
USP3-201ENST00000268049 KRTAP10-11P60412 298 aa5.4□□□□□ -1.55
USP3-201ENST00000268049 CFAP54Q96N23 3096 aa5.39□□□□□ -1.55
USP3-201ENST00000268049 DEFB116Q30KQ4 102 aa5.39□□□□□ -1.55
USP3-201ENST00000268049 UNQ6190/PRO20217Q6UXQ8 127 aa5.39□□□□□ -1.55
USP3-201ENST00000268049 SPINK1P00995 79 aa5.39□□□□□ -1.55
USP3-201ENST00000268049 Q8NBF4 154 aa5.39□□□□□ -1.55
USP3-201ENST00000268049 ATRQ13535 2644 aa5.39□□□□□ -1.55
USP3-201ENST00000268049 COX8CQ7Z4L0 72 aa5.39□□□□□ -1.55
USP3-201ENST00000268049 X6R8D5 127 aa5.39□□□□□ -1.55
USP3-201ENST00000268049 IGHV6-1A0A0B4J1U7 121 aa5.38□□□□□ -1.55
USP3-201ENST00000268049 LINC00304Q8N9R0 145 aa5.38□□□□□ -1.55
USP3-201ENST00000268049 AGRNO00468 2067 aa5.38□□□□□ -1.55
USP3-201ENST00000268049 Q8NAQ8 132 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 150.4 ms