RNA–Protein interactions for RNA: ENST00000265354.5

SRF-201, Transcript of serum response factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRF, Length 4,202 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRF-201ENST00000265354 BEAN1Q3B7T3 259 aa12.08□□□□□ -0.48
SRF-201ENST00000265354 Q8N3U1 123 aa12.08□□□□□ -0.48
SRF-201ENST00000265354 FHL2Q14192 279 aa12.07□□□□□ -0.48
SRF-201ENST00000265354 C6orf223Q8N319 242 aa12.06□□□□□ -0.48
SRF-201ENST00000265354 Q8N814 137 aa12.06□□□□□ -0.48
SRF-201ENST00000265354 CCKP06307 115 aa12.05□□□□□ -0.48
SRF-201ENST00000265354 LINC00474Q9P2X8 69 aa12.05□□□□□ -0.48
SRF-201ENST00000265354 COX7BP24311 80 aa12.04□□□□□ -0.48
SRF-201ENST00000265354 LINC01006Q8NI28 216 aa12.04□□□□□ -0.48
SRF-201ENST00000265354 SPART-AS1P0CW21 52 aa12.03□□□□□ -0.48
SRF-201ENST00000265354 APOC4P55056 127 aa12.03□□□□□ -0.48
SRF-201ENST00000265354 C2orf48Q96LS8 159 aa12.03□□□□□ -0.48
SRF-201ENST00000265354 UNC79Q9P2D8 2635 aa12.02□□□□□ -0.48
SRF-201ENST00000265354 ATP5EP56381 51 aaPredicted RBP12.02□□□□□ -0.48
SRF-201ENST00000265354 IGKV2-28A0A075B6P5 120 aa12.02□□□□□ -0.49
SRF-201ENST00000265354 IGHV3OR16-9A0A0B4J2B5 98 aa12.02□□□□□ -0.49
SRF-201ENST00000265354 IGKV2D-28P01615 120 aa12.02□□□□□ -0.49
SRF-201ENST00000265354 CYSRT1A8MQ03 144 aa12.02□□□□□ -0.49
SRF-201ENST00000265354 UBE2BP63146 152 aa12.02□□□□□ -0.49
SRF-201ENST00000265354 C9orf129Q5T035 196 aaKnown RBP12.02□□□□□ -0.49
SRF-201ENST00000265354 ZNF843Q8N446 348 aa12.02□□□□□ -0.49
SRF-201ENST00000265354 CD164L2Q6UWJ8 174 aa12.01□□□□□ -0.49
SRF-201ENST00000265354 FAM30AQ9NZY2 134 aa12□□□□□ -0.49
SRF-201ENST00000265354 LINC01561Q8N1V8 128 aa12□□□□□ -0.49
SRF-201ENST00000265354 IGLV5-45A0A087WSX0 123 aa11.99□□□□□ -0.49
SRF-201ENST00000265354 A0A0J9YWU9 116 aa11.99□□□□□ -0.49
SRF-201ENST00000265354 Q8N9L7 120 aa11.98□□□□□ -0.49
SRF-201ENST00000265354 SPENQ96T58 3664 aaKnown RBP11.98□□□□□ -0.49
SRF-201ENST00000265354 F8WDY8 70 aa11.98□□□□□ -0.49
SRF-201ENST00000265354 Q8IZM0 81 aa11.97□□□□□ -0.49
SRF-201ENST00000265354 TMEM254Q8TBM7 123 aa11.97□□□□□ -0.49
SRF-201ENST00000265354 ETDCA0A1B0GVM5 59 aa11.97□□□□□ -0.49
SRF-201ENST00000265354 CRYBG3Q68DQ2 2970 aa11.97□□□□□ -0.49
SRF-201ENST00000265354 NDUFS5O43920 106 aa11.97□□□□□ -0.49
SRF-201ENST00000265354 ESRGQ1W209 222 aa11.97□□□□□ -0.49
SRF-201ENST00000265354 TRBV10-3A0A0K0K1G6 114 aa11.96□□□□□ -0.49
SRF-201ENST00000265354 UBR5O95071 2799 aaPredicted RBP11.95□□□□□ -0.5
SRF-201ENST00000265354 NF1P21359 2839 aa11.95□□□□□ -0.5
SRF-201ENST00000265354 PDE6GP18545 87 aa11.94□□□□□ -0.5
SRF-201ENST00000265354 KLK9Q2XQG4 91 aa11.94□□□□□ -0.5
SRF-201ENST00000265354 DCHS2Q6V1P9 2916 aa11.94□□□□□ -0.5
SRF-201ENST00000265354 A0A096LNI7 61 aa11.94□□□□□ -0.5
SRF-201ENST00000265354 PRYO14603 147 aa11.94□□□□□ -0.5
SRF-201ENST00000265354 FBN2P35556 2912 aa11.93□□□□□ -0.5
SRF-201ENST00000265354 SMR3AQ99954 134 aa11.93□□□□□ -0.5
SRF-201ENST00000265354 PRR15LQ9BU68 103 aa11.93□□□□□ -0.5
SRF-201ENST00000265354 UTP20O75691 2785 aaKnown RBP11.92□□□□□ -0.5
SRF-201ENST00000265354 CELSR1Q9NYQ6 3014 aa11.91□□□□□ -0.5
SRF-201ENST00000265354 INAFM1C9JVW0 142 aa11.91□□□□□ -0.5
SRF-201ENST00000265354 ZNF73O43830 326 aaPredicted RBP11.91□□□□□ -0.5
SRF-201ENST00000265354 RPL37AP8A6NKH3 93 aa11.9□□□□□ -0.51
SRF-201ENST00000265354 C9orf66Q5T8R8 295 aa11.9□□□□□ -0.51
SRF-201ENST00000265354 WFDC10BQ8IUB3 73 aa11.9□□□□□ -0.51
SRF-201ENST00000265354 Q6ZVQ6 151 aa11.89□□□□□ -0.51
SRF-201ENST00000265354 TEP1Q99973 2627 aaKnown RBP11.89□□□□□ -0.51
SRF-201ENST00000265354 WFDC13Q8IUB5 93 aa11.89□□□□□ -0.51
SRF-201ENST00000265354 C10orf25Q5T742 122 aa11.88□□□□□ -0.51
SRF-201ENST00000265354 FAM104AQ969W3 186 aa11.88□□□□□ -0.51
SRF-201ENST00000265354 WIPF1O43516 503 aa11.87□□□□□ -0.51
SRF-201ENST00000265354 LINC01547P58512 204 aaPredicted RBP11.87□□□□□ -0.51
SRF-201ENST00000265354 IGKV2-24A0A0C4DH68 120 aa11.87□□□□□ -0.51
SRF-201ENST00000265354 CDK2AP2O75956 126 aa11.86□□□□□ -0.51
SRF-201ENST00000265354 CELSR2Q9HCU4 2923 aa11.86□□□□□ -0.51
SRF-201ENST00000265354 IGLV1-51P01701 117 aa11.86□□□□□ -0.51
SRF-201ENST00000265354 HRNRQ86YZ3 2850 aaPredicted RBP11.86□□□□□ -0.51
SRF-201ENST00000265354 TRAV10A0A0B4J240 114 aa11.86□□□□□ -0.51
SRF-201ENST00000265354 LINC00575Q6W349 94 aa11.84□□□□□ -0.51
SRF-201ENST00000265354 HIGD2AQ9BW72 106 aa11.84□□□□□ -0.51
SRF-201ENST00000265354 NOTCH1P46531 2555 aa11.83□□□□□ -0.52
SRF-201ENST00000265354 LYRM9A8MSI8 78 aa11.83□□□□□ -0.52
SRF-201ENST00000265354 NBEAL1Q6ZS30 2694 aa11.83□□□□□ -0.52
SRF-201ENST00000265354 TM2D3Q9BRN9 247 aa11.83□□□□□ -0.52
SRF-201ENST00000265354 HELZ2Q9BYK8 2649 aaKnown RBP11.82□□□□□ -0.52
SRF-201ENST00000265354 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.81□□□□□ -0.52
SRF-201ENST00000265354 UBE2AP49459 152 aa11.81□□□□□ -0.52
SRF-201ENST00000265354 IGSF10Q6WRI0 2623 aa11.81□□□□□ -0.52
SRF-201ENST00000265354 COX17Q14061 63 aa11.81□□□□□ -0.52
SRF-201ENST00000265354 CYSTM1Q9H1C7 97 aa11.8□□□□□ -0.52
SRF-201ENST00000265354 MUC7Q8TAX7 377 aa11.8□□□□□ -0.52
SRF-201ENST00000265354 SETXQ7Z333 2677 aaKnown RBP11.78□□□□□ -0.52
SRF-201ENST00000265354 LINC00208Q96KT6 92 aa11.78□□□□□ -0.52
SRF-201ENST00000265354 DEFB116Q30KQ4 102 aa11.78□□□□□ -0.52
SRF-201ENST00000265354 KPRPQ5T749 579 aaPredicted RBP11.77□□□□□ -0.53
SRF-201ENST00000265354 A0A1B0GUV1 79 aa11.76□□□□□ -0.53
SRF-201ENST00000265354 SYCNQ0VAF6 134 aa11.76□□□□□ -0.53
SRF-201ENST00000265354 LELP1Q5T871 98 aa11.76□□□□□ -0.53
SRF-201ENST00000265354 H0Y9J4 135 aa11.75□□□□□ -0.53
SRF-201ENST00000265354 SPATA3Q8NHX4 192 aa11.75□□□□□ -0.53
SRF-201ENST00000265354 CR1P17927 2039 aa11.75□□□□□ -0.53
SRF-201ENST00000265354 PLAC8L1A1L4L8 177 aa11.74□□□□□ -0.53
SRF-201ENST00000265354 M0R378 163 aa11.74□□□□□ -0.53
SRF-201ENST00000265354 COL6A5A8TX70 2615 aa11.73□□□□□ -0.53
SRF-201ENST00000265354 OXLD1Q5BKU9 147 aa11.73□□□□□ -0.53
SRF-201ENST00000265354 H7BZZ5 65 aa11.71□□□□□ -0.53
SRF-201ENST00000265354 LY6G6DO95868 133 aa11.71□□□□□ -0.53
SRF-201ENST00000265354 H3BQ85 93 aa11.71□□□□□ -0.54
SRF-201ENST00000265354 IGKV4-1P06312 121 aa11.71□□□□□ -0.54
SRF-201ENST00000265354 M0R2N4 97 aa11.7□□□□□ -0.54
SRF-201ENST00000265354 DEFB131BA0A096LNP1 70 aa11.7□□□□□ -0.54
SRF-201ENST00000265354 A8MUN3 132 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms