RNA–Protein interactions for RNA: ENST00000263856.8

CHMP3-201, Transcript of charged multivesicular body protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP3, Length 3,171 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-201ENST00000263856 IGHV4-28A0A0C4DH34 117 aa8.46□□□□□ -1.06
CHMP3-201ENST00000263856 KRTAP10-3P60369 221 aa8.46□□□□□ -1.06
CHMP3-201ENST00000263856 Q6ZQY7 126 aa8.46□□□□□ -1.06
CHMP3-201ENST00000263856 UPK3BQ9BT76 320 aa8.46□□□□□ -1.06
CHMP3-201ENST00000263856 CYSRT1A8MQ03 144 aa8.45□□□□□ -1.06
CHMP3-201ENST00000263856 RBM3P98179 157 aaKnown RBP8.45□□□□□ -1.06
CHMP3-201ENST00000263856 FAM19A5Q7Z5A7 132 aaPredicted RBP8.45□□□□□ -1.06
CHMP3-201ENST00000263856 HELZ2Q9BYK8 2649 aaKnown RBP8.45□□□□□ -1.06
CHMP3-201ENST00000263856 C20orf197Q8N268 126 aa8.45□□□□□ -1.06
CHMP3-201ENST00000263856 HIGD2BQ4VC39 106 aa8.44□□□□□ -1.06
CHMP3-201ENST00000263856 ANK3Q12955 4377 aaKnown RBP8.44□□□□□ -1.06
CHMP3-201ENST00000263856 KRTAP1-1Q07627 177 aa8.44□□□□□ -1.06
CHMP3-201ENST00000263856 C16orf95Q9H693 158 aa8.43□□□□□ -1.06
CHMP3-201ENST00000263856 LINC00575Q6W349 94 aa8.43□□□□□ -1.06
CHMP3-201ENST00000263856 TENM1Q9UKZ4 2725 aa8.42□□□□□ -1.06
CHMP3-201ENST00000263856 NDUFC2O95298 119 aa8.42□□□□□ -1.06
CHMP3-201ENST00000263856 COX17Q14061 63 aa8.41□□□□□ -1.06
CHMP3-201ENST00000263856 TRBV10-3A0A0K0K1G6 114 aa8.41□□□□□ -1.06
CHMP3-201ENST00000263856 PDZD2O15018 2839 aa8.41□□□□□ -1.06
CHMP3-201ENST00000263856 LYRM9A8MSI8 78 aa8.4□□□□□ -1.07
CHMP3-201ENST00000263856 LINC00612Q8N6U2 182 aa8.4□□□□□ -1.07
CHMP3-201ENST00000263856 TRRAPQ9Y4A5 3859 aa8.39□□□□□ -1.07
CHMP3-201ENST00000263856 LINC00167Q96N53 147 aa8.38□□□□□ -1.07
CHMP3-201ENST00000263856 TEP1Q99973 2627 aaKnown RBP8.38□□□□□ -1.07
CHMP3-201ENST00000263856 SMIM9A6NGZ8 99 aa8.38□□□□□ -1.07
CHMP3-201ENST00000263856 ZNF561-AS1K7EIQ3 104 aa8.38□□□□□ -1.07
CHMP3-201ENST00000263856 TMEM258P61165 79 aa8.38□□□□□ -1.07
CHMP3-201ENST00000263856 DPH3Q96FX2 82 aa8.38□□□□□ -1.07
CHMP3-201ENST00000263856 SNURFQ9Y675 71 aa8.38□□□□□ -1.07
CHMP3-201ENST00000263856 Q6ZQT0 140 aa8.37□□□□□ -1.07
CHMP3-201ENST00000263856 DIRC1Q969H9 104 aa8.37□□□□□ -1.07
CHMP3-201ENST00000263856 APOC4P55056 127 aa8.36□□□□□ -1.07
CHMP3-201ENST00000263856 PKD1L1Q8TDX9 2849 aa8.36□□□□□ -1.07
CHMP3-201ENST00000263856 HIVEP1P15822 2718 aa8.36□□□□□ -1.07
CHMP3-201ENST00000263856 Q6ZVQ6 151 aa8.36□□□□□ -1.07
CHMP3-201ENST00000263856 CAMK2N2Q96S95 79 aa8.36□□□□□ -1.07
CHMP3-201ENST00000263856 C6orf48Q9UBA6 75 aa8.36□□□□□ -1.07
CHMP3-201ENST00000263856 SPART-AS1P0CW21 52 aa8.35□□□□□ -1.07
CHMP3-201ENST00000263856 LINC01547P58512 204 aaPredicted RBP8.35□□□□□ -1.07
CHMP3-201ENST00000263856 C9orf66Q5T8R8 295 aa8.35□□□□□ -1.07
CHMP3-201ENST00000263856 ATP5EP2Q5VTU8 51 aa8.35□□□□□ -1.07
CHMP3-201ENST00000263856 TRAV10A0A0B4J240 114 aa8.34□□□□□ -1.07
CHMP3-201ENST00000263856 OXTP01178 125 aa8.34□□□□□ -1.07
CHMP3-201ENST00000263856 LELP1Q5T871 98 aa8.34□□□□□ -1.07
CHMP3-201ENST00000263856 DEFB105AQ8NG35 78 aa8.34□□□□□ -1.07
CHMP3-201ENST00000263856 WFDC10BQ8IUB3 73 aa8.33□□□□□ -1.08
CHMP3-201ENST00000263856 ZNF73O43830 326 aaPredicted RBP8.33□□□□□ -1.08
CHMP3-201ENST00000263856 COX7BP24311 80 aa8.33□□□□□ -1.08
CHMP3-201ENST00000263856 RETNQ9HD89 108 aa8.33□□□□□ -1.08
CHMP3-201ENST00000263856 INAFM1C9JVW0 142 aa8.32□□□□□ -1.08
CHMP3-201ENST00000263856 Q8N9L7 120 aa8.32□□□□□ -1.08
CHMP3-201ENST00000263856 F8P00451 2351 aa8.32□□□□□ -1.08
CHMP3-201ENST00000263856 OTOGQ6ZRI0 2925 aa8.32□□□□□ -1.08
CHMP3-201ENST00000263856 C4orf26Q17RF5 130 aa8.32□□□□□ -1.08
CHMP3-201ENST00000263856 Q8NAQ8 132 aa8.32□□□□□ -1.08
CHMP3-201ENST00000263856 IGLV6-57P01721 117 aa8.31□□□□□ -1.08
CHMP3-201ENST00000263856 MUC7Q8TAX7 377 aa8.31□□□□□ -1.08
CHMP3-201ENST00000263856 HRCT1Q6UXD1 115 aa8.31□□□□□ -1.08
CHMP3-201ENST00000263856 RMI2Q96E14 147 aa8.3□□□□□ -1.08
CHMP3-201ENST00000263856 IGHV4-30-4P0DP06 118 aa8.3□□□□□ -1.08
CHMP3-201ENST00000263856 LYPD5Q6UWN5 251 aa8.29□□□□□ -1.08
CHMP3-201ENST00000263856 A0A0J9YWU9 116 aa8.29□□□□□ -1.08
CHMP3-201ENST00000263856 FAM236DA0A1B0GTK5 79 aa8.29□□□□□ -1.08
CHMP3-201ENST00000263856 FAM236CP0DP71 79 aa8.29□□□□□ -1.08
CHMP3-201ENST00000263856 MIFP14174 115 aa8.29□□□□□ -1.08
CHMP3-201ENST00000263856 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.29□□□□□ -1.08
CHMP3-201ENST00000263856 Q6ZRU5 148 aa8.29□□□□□ -1.08
CHMP3-201ENST00000263856 C3orf84H3BNL1 204 aa8.28□□□□□ -1.08
CHMP3-201ENST00000263856 IGKV2D-24A0A075B6R9 120 aa8.28□□□□□ -1.08
CHMP3-201ENST00000263856 LOC110117498A0A087WWA1 95 aa8.27□□□□□ -1.09
CHMP3-201ENST00000263856 RPS28P62857 69 aaKnown RBP8.26□□□□□ -1.09
CHMP3-201ENST00000263856 C5orf47Q569G3 176 aa8.26□□□□□ -1.09
CHMP3-201ENST00000263856 KPRPQ5T749 579 aaPredicted RBP8.26□□□□□ -1.09
CHMP3-201ENST00000263856 TM2D3Q9BRN9 247 aa8.26□□□□□ -1.09
CHMP3-201ENST00000263856 F8WEM9 126 aa8.26□□□□□ -1.09
CHMP3-201ENST00000263856 TRAV7A0A075B6U4 112 aa8.25□□□□□ -1.09
CHMP3-201ENST00000263856 PRR34Q9NV39 138 aa8.25□□□□□ -1.09
CHMP3-201ENST00000263856 NSD1Q96L73 2696 aaPredicted RBP8.25□□□□□ -1.09
CHMP3-201ENST00000263856 Q6ZTC4 211 aa8.24□□□□□ -1.09
CHMP3-201ENST00000263856 OXLD1Q5BKU9 147 aa8.24□□□□□ -1.09
CHMP3-201ENST00000263856 C1orf43Q9BWL3 253 aa8.24□□□□□ -1.09
CHMP3-201ENST00000263856 VPREB1P12018 145 aa8.23□□□□□ -1.09
CHMP3-201ENST00000263856 ELOF1P60002 83 aaKnown RBP8.23□□□□□ -1.09
CHMP3-201ENST00000263856 BPY2O14599 106 aa8.22□□□□□ -1.09
CHMP3-201ENST00000263856 NKAPP1Q8N9T2 125 aa8.22□□□□□ -1.09
CHMP3-201ENST00000263856 RPL37AP8A6NKH3 93 aa8.22□□□□□ -1.09
CHMP3-201ENST00000263856 H7BZZ5 65 aa8.22□□□□□ -1.09
CHMP3-201ENST00000263856 J3QKU1 62 aa8.22□□□□□ -1.09
CHMP3-201ENST00000263856 PDE6GP18545 87 aa8.22□□□□□ -1.09
CHMP3-201ENST00000263856 M0R378 163 aa8.21□□□□□ -1.09
CHMP3-201ENST00000263856 NREPQ16612 68 aa8.21□□□□□ -1.09
CHMP3-201ENST00000263856 BAHCC1Q9P281 2608 aa8.21□□□□□ -1.09
CHMP3-201ENST00000263856 Q6ZRP5 223 aa8.21□□□□□ -1.1
CHMP3-201ENST00000263856 TENM3Q9P273 2699 aa8.21□□□□□ -1.1
CHMP3-201ENST00000263856 TRBV7-4A0A0J9YYF1 115 aa8.2□□□□□ -1.1
CHMP3-201ENST00000263856 NDUFC2-KCTD14E9PQ53 114 aa8.19□□□□□ -1.1
CHMP3-201ENST00000263856 CXCL6P80162 114 aa8.19□□□□□ -1.1
CHMP3-201ENST00000263856 C15orf56Q8N910 161 aa8.19□□□□□ -1.1
CHMP3-201ENST00000263856 FLNBO75369 2602 aaKnown RBP8.19□□□□□ -1.1
CHMP3-201ENST00000263856 GVQW2A0A096LPI5 108 aaPredicted RBP8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 208.4 ms