RNA–Protein interactions for RNA: ENST00000263066.10

LDB3-201, Transcript of LIM domain binding 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LDB3, Length 3,873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-201ENST00000263066 IGHV4-28A0A0C4DH34 117 aa5.99□□□□□ -1.45
LDB3-201ENST00000263066 MED14OSP0DP75 135 aa5.99□□□□□ -1.45
LDB3-201ENST00000263066 LINC00337Q8N6G1 96 aa5.99□□□□□ -1.45
LDB3-201ENST00000263066 C16orf95Q9H693 158 aa5.99□□□□□ -1.45
LDB3-201ENST00000263066 OTOGQ6ZRI0 2925 aa5.99□□□□□ -1.45
LDB3-201ENST00000263066 INSP01308 110 aa5.99□□□□□ -1.45
LDB3-201ENST00000263066 PRM2P04554 102 aa5.99□□□□□ -1.45
LDB3-201ENST00000263066 NPBQ8NG41 125 aa5.99□□□□□ -1.45
LDB3-201ENST00000263066 C11orf45Q8TAV5 145 aa5.99□□□□□ -1.45
LDB3-201ENST00000263066 LINC00574Q9H8X3 128 aa5.99□□□□□ -1.45
LDB3-201ENST00000263066 TRBV6-5A0A0K0K1A5 114 aa5.98□□□□□ -1.45
LDB3-201ENST00000263066 PRR15Q8IV56 129 aa5.98□□□□□ -1.45
LDB3-201ENST00000263066 HIGD2AQ9BW72 106 aa5.98□□□□□ -1.45
LDB3-201ENST00000263066 CCDC140Q96MF4 163 aa5.98□□□□□ -1.45
LDB3-201ENST00000263066 ZNF702PQ9H963 129 aa5.98□□□□□ -1.45
LDB3-201ENST00000263066 TRRAPQ9Y4A5 3859 aa5.98□□□□□ -1.45
LDB3-201ENST00000263066 LYRM9A8MSI8 78 aa5.98□□□□□ -1.45
LDB3-201ENST00000263066 Q8N9L7 120 aa5.98□□□□□ -1.45
LDB3-201ENST00000263066 Q9UF83 564 aa5.98□□□□□ -1.45
LDB3-201ENST00000263066 A8MUN3 132 aa5.97□□□□□ -1.45
LDB3-201ENST00000263066 DEFB135Q30KP9 77 aa5.97□□□□□ -1.45
LDB3-201ENST00000263066 Q6ZVQ6 151 aa5.97□□□□□ -1.45
LDB3-201ENST00000263066 TRGV1A0A0A0MS02 117 aa5.97□□□□□ -1.45
LDB3-201ENST00000263066 COX6A2Q02221 97 aa5.97□□□□□ -1.45
LDB3-201ENST00000263066 MRGPRG-AS1Q2M3A8 158 aa5.97□□□□□ -1.45
LDB3-201ENST00000263066 PRR15LQ9BU68 103 aa5.97□□□□□ -1.45
LDB3-201ENST00000263066 FAM30AQ9NZY2 134 aa5.97□□□□□ -1.45
LDB3-201ENST00000263066 UBE2AP49459 152 aa5.96□□□□□ -1.46
LDB3-201ENST00000263066 TRBV10-3A0A0K0K1G6 114 aa5.96□□□□□ -1.46
LDB3-201ENST00000263066 C11orf72Q8NBR9 251 aa5.96□□□□□ -1.46
LDB3-201ENST00000263066 CCL18P55774 89 aa5.95□□□□□ -1.46
LDB3-201ENST00000263066 NTM-AS1Q6ZSK4 140 aa5.95□□□□□ -1.46
LDB3-201ENST00000263066 KTN1-AS1Q86SY8 53 aa5.95□□□□□ -1.46
LDB3-201ENST00000263066 ZNF575Q86XF7 245 aa5.95□□□□□ -1.46
LDB3-201ENST00000263066 C6orf223Q8N319 242 aa5.95□□□□□ -1.46
LDB3-201ENST00000263066 MDFIQ99750 246 aa5.95□□□□□ -1.46
LDB3-201ENST00000263066 NDUFA4O00483 81 aa5.95□□□□□ -1.46
LDB3-201ENST00000263066 LINC00269Q8N2A0 174 aa5.95□□□□□ -1.46
LDB3-201ENST00000263066 CSMD3Q7Z407 3707 aa5.94□□□□□ -1.46
LDB3-201ENST00000263066 KRTAP24-1Q3LI83 254 aa5.94□□□□□ -1.46
LDB3-201ENST00000263066 C6orf99Q4VX62 202 aa5.94□□□□□ -1.46
LDB3-201ENST00000263066 F8W735 103 aaPredicted RBP5.94□□□□□ -1.46
LDB3-201ENST00000263066 LINC00315P59091 139 aa5.94□□□□□ -1.46
LDB3-201ENST00000263066 KIF25-AS1Q9Y6Z4 181 aa5.94□□□□□ -1.46
LDB3-201ENST00000263066 PRR3P79522 188 aaKnown RBP5.93□□□□□ -1.46
LDB3-201ENST00000263066 SMIM1B2RUZ4 78 aa5.93□□□□□ -1.46
LDB3-201ENST00000263066 NDUFS5O43920 106 aa5.93□□□□□ -1.46
LDB3-201ENST00000263066 LINC00242Q5T6M2 205 aa5.93□□□□□ -1.46
LDB3-201ENST00000263066 SERTAD4-AS1Q5TG53 156 aa5.93□□□□□ -1.46
LDB3-201ENST00000263066 FBN1P35555 2871 aaKnown RBP5.92□□□□□ -1.46
LDB3-201ENST00000263066 TRGV4A0A0C4DH28 118 aa5.92□□□□□ -1.46
LDB3-201ENST00000263066 BEAN1Q3B7T3 259 aa5.92□□□□□ -1.46
LDB3-201ENST00000263066 Q8N814 137 aa5.92□□□□□ -1.46
LDB3-201ENST00000263066 HCG22E2RYF7 251 aa5.91□□□□□ -1.46
LDB3-201ENST00000263066 CLPSL2Q6UWE3 100 aa5.91□□□□□ -1.46
LDB3-201ENST00000263066 KRTAP1-3Q8IUG1 177 aa5.91□□□□□ -1.46
LDB3-201ENST00000263066 TRAV22A0A0B4J277 110 aa5.91□□□□□ -1.46
LDB3-201ENST00000263066 ZNF73O43830 326 aaPredicted RBP5.91□□□□□ -1.46
LDB3-201ENST00000263066 Q6ZQY7 126 aa5.91□□□□□ -1.46
LDB3-201ENST00000263066 Q6ZRU5 148 aa5.91□□□□□ -1.46
LDB3-201ENST00000263066 BCE1O60756 84 aa5.91□□□□□ -1.46
LDB3-201ENST00000263066 C3orf84H3BNL1 204 aa5.9□□□□□ -1.46
LDB3-201ENST00000263066 PDZD2O15018 2839 aa5.9□□□□□ -1.47
LDB3-201ENST00000263066 PDE6GP18545 87 aa5.9□□□□□ -1.47
LDB3-201ENST00000263066 NOP10Q9NPE3 64 aaKnown RBP5.89□□□□□ -1.47
LDB3-201ENST00000263066 HIGD2BQ4VC39 106 aa5.89□□□□□ -1.47
LDB3-201ENST00000263066 A8MTW9 85 aa5.89□□□□□ -1.47
LDB3-201ENST00000263066 C9orf66Q5T8R8 295 aa5.89□□□□□ -1.47
LDB3-201ENST00000263066 DEFB105AQ8NG35 78 aa5.89□□□□□ -1.47
LDB3-201ENST00000263066 C1orf64Q8NEQ6 169 aa5.88□□□□□ -1.47
LDB3-201ENST00000263066 C4orf3Q8WVX3 66 aa5.88□□□□□ -1.47
LDB3-201ENST00000263066 MP68P56378 58 aa5.88□□□□□ -1.47
LDB3-201ENST00000263066 C22orf24Q9Y442 160 aa5.88□□□□□ -1.47
LDB3-201ENST00000263066 IGKV2-28A0A075B6P5 120 aa5.87□□□□□ -1.47
LDB3-201ENST00000263066 IGKV2D-28P01615 120 aa5.87□□□□□ -1.47
LDB3-201ENST00000263066 NKAPP1Q8N9T2 125 aa5.87□□□□□ -1.47
LDB3-201ENST00000263066 CHCHD7Q9BUK0 85 aa5.87□□□□□ -1.47
LDB3-201ENST00000263066 A0A096LNT2 108 aa5.87□□□□□ -1.47
LDB3-201ENST00000263066 M0R378 163 aa5.87□□□□□ -1.47
LDB3-201ENST00000263066 VPREB1P12018 145 aa5.86□□□□□ -1.47
LDB3-201ENST00000263066 DEFB114Q30KQ6 69 aa5.86□□□□□ -1.47
LDB3-201ENST00000263066 DIRC1Q969H9 104 aa5.86□□□□□ -1.47
LDB3-201ENST00000263066 TRBV6-4A0A1B0GX49 114 aa5.86□□□□□ -1.47
LDB3-201ENST00000263066 IBA57-AS1B1ANH7 110 aa5.86□□□□□ -1.47
LDB3-201ENST00000263066 CXCL6P80162 114 aa5.86□□□□□ -1.47
LDB3-201ENST00000263066 PKD1L1Q8TDX9 2849 aa5.86□□□□□ -1.47
LDB3-201ENST00000263066 CR1P17927 2039 aa5.85□□□□□ -1.47
LDB3-201ENST00000263066 UBE2DNLQ8IWF7 75 aa5.85□□□□□ -1.47
LDB3-201ENST00000263066 LYSTQ99698 3801 aa5.85□□□□□ -1.47
LDB3-201ENST00000263066 KLLNB2CW77 178 aa5.85□□□□□ -1.47
LDB3-201ENST00000263066 H3BUA1 57 aa5.85□□□□□ -1.47
LDB3-201ENST00000263066 KRTAP1-1Q07627 177 aa5.84□□□□□ -1.47
LDB3-201ENST00000263066 SYCNQ0VAF6 134 aa5.84□□□□□ -1.47
LDB3-201ENST00000263066 IGLV5-39A0A0G2JS06 123 aa5.84□□□□□ -1.47
LDB3-201ENST00000263066 MAP6D1Q9H9H5 199 aa5.84□□□□□ -1.47
LDB3-201ENST00000263066 STAB2Q8WWQ8 2551 aa5.84□□□□□ -1.47
LDB3-201ENST00000263066 Q6ZQT0 140 aa5.84□□□□□ -1.48
LDB3-201ENST00000263066 Q6ZRP5 223 aa5.84□□□□□ -1.48
LDB3-201ENST00000263066 TRBV7-4A0A0J9YYF1 115 aa5.83□□□□□ -1.48
LDB3-201ENST00000263066 EPM2AB3EWF7 344 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms