RNA–Protein interactions for RNA: ENST00000262018.7

SGCA-201, Transcript of sarcoglycan alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCA, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-201ENST00000262018 K7ERJ3 54 aa8.77□□□□□ -1.01
SGCA-201ENST00000262018 OXTP01178 125 aa8.77□□□□□ -1.01
SGCA-201ENST00000262018 CFC1BP0CG36 223 aa8.77□□□□□ -1.01
SGCA-201ENST00000262018 CFC1P0CG37 223 aa8.77□□□□□ -1.01
SGCA-201ENST00000262018 LINC00528Q8N1L1 170 aa8.77□□□□□ -1.01
SGCA-201ENST00000262018 IGLV5-52A0A0A0MRZ9 124 aa8.76□□□□□ -1.01
SGCA-201ENST00000262018 GAGE12HA6NDE8 117 aa8.76□□□□□ -1.01
SGCA-201ENST00000262018 UBE2WQ96B02 151 aa8.76□□□□□ -1.01
SGCA-201ENST00000262018 FAM30AQ9NZY2 134 aa8.76□□□□□ -1.01
SGCA-201ENST00000262018 TOMM7Q9P0U1 55 aa8.76□□□□□ -1.01
SGCA-201ENST00000262018 A4D1N5 150 aa8.75□□□□□ -1.01
SGCA-201ENST00000262018 MUSTN1Q8IVN3 82 aa8.75□□□□□ -1.01
SGCA-201ENST00000262018 Q8IZM0 81 aa8.75□□□□□ -1.01
SGCA-201ENST00000262018 ERG28Q9UKR5 140 aa8.75□□□□□ -1.01
SGCA-201ENST00000262018 J3QR89 54 aa8.74□□□□□ -1.01
SGCA-201ENST00000262018 APOMO95445 188 aa8.74□□□□□ -1.01
SGCA-201ENST00000262018 TSPAN13O95857 204 aa8.74□□□□□ -1.01
SGCA-201ENST00000262018 COX6CP09669 75 aa8.74□□□□□ -1.01
SGCA-201ENST00000262018 ADAMTSL4-AS1Q5T5F5 129 aa8.74□□□□□ -1.01
SGCA-201ENST00000262018 M0QXV9 152 aa8.73□□□□□ -1.01
SGCA-201ENST00000262018 PRSS2P07478 247 aa8.73□□□□□ -1.01
SGCA-201ENST00000262018 MALP21145 153 aa8.73□□□□□ -1.01
SGCA-201ENST00000262018 CXCL5P42830 114 aa8.73□□□□□ -1.01
SGCA-201ENST00000262018 KIAA0087Q14695 138 aa8.73□□□□□ -1.01
SGCA-201ENST00000262018 KRTAP26-1Q6PEX3 210 aa8.73□□□□□ -1.01
SGCA-201ENST00000262018 FAT3Q8TDW7 4589 aa8.73□□□□□ -1.01
SGCA-201ENST00000262018 TRBV30A0A0K0K1B3 111 aa8.72□□□□□ -1.01
SGCA-201ENST00000262018 IBA57-AS1B1ANH7 110 aa8.72□□□□□ -1.01
SGCA-201ENST00000262018 C6orf226Q5I0X4 101 aa8.72□□□□□ -1.01
SGCA-201ENST00000262018 OCIAD2Q56VL3 154 aa8.71□□□□□ -1.01
SGCA-201ENST00000262018 MEIG1Q5JSS6 88 aa8.71□□□□□ -1.01
SGCA-201ENST00000262018 LOC107984156A0A0G2JMH3 177 aa8.7□□□□□ -1.02
SGCA-201ENST00000262018 CFAP161Q6P656 301 aa8.7□□□□□ -1.02
SGCA-201ENST00000262018 ARL17AQ8IVW1 177 aa8.7□□□□□ -1.02
SGCA-201ENST00000262018 NTN5Q8WTR8 489 aaPredicted RBP8.7□□□□□ -1.02
SGCA-201ENST00000262018 DNAH8Q96JB1 4490 aa8.69□□□□□ -1.02
SGCA-201ENST00000262018 LINC00308Q8TCZ7 52 aa8.69□□□□□ -1.02
SGCA-201ENST00000262018 NAA38Q9BRA0 125 aaKnown RBP8.69□□□□□ -1.02
SGCA-201ENST00000262018 C1orf43Q9BWL3 253 aa8.69□□□□□ -1.02
SGCA-201ENST00000262018 CBY1Q9Y3M2 126 aa8.69□□□□□ -1.02
SGCA-201ENST00000262018 SCGB1C2P0DMR2 95 aa8.68□□□□□ -1.02
SGCA-201ENST00000262018 PSMB2P49721 201 aa8.68□□□□□ -1.02
SGCA-201ENST00000262018 SPAG11BQ08648 103 aa8.68□□□□□ -1.02
SGCA-201ENST00000262018 COX17Q14061 63 aa8.68□□□□□ -1.02
SGCA-201ENST00000262018 DAND5Q8N907 189 aa8.68□□□□□ -1.02
SGCA-201ENST00000262018 Q9HAA7 133 aa8.68□□□□□ -1.02
SGCA-201ENST00000262018 H3BMG7 143 aa8.67□□□□□ -1.02
SGCA-201ENST00000262018 CKS1BP61024 79 aa8.67□□□□□ -1.02
SGCA-201ENST00000262018 ATXN8Q156A1 80 aa8.67□□□□□ -1.02
SGCA-201ENST00000262018 Q1RN00 199 aa8.67□□□□□ -1.02
SGCA-201ENST00000262018 C2orf82Q6UX34 121 aa8.67□□□□□ -1.02
SGCA-201ENST00000262018 LINC01600Q96MT4 127 aa8.67□□□□□ -1.02
SGCA-201ENST00000262018 IGKV2D-24A0A075B6R9 120 aa8.66□□□□□ -1.02
SGCA-201ENST00000262018 TRAV13-2A0A0B4J235 113 aa8.66□□□□□ -1.02
SGCA-201ENST00000262018 A0A0U1RRA0 63 aa8.66□□□□□ -1.02
SGCA-201ENST00000262018 RMI2Q96E14 147 aa8.66□□□□□ -1.02
SGCA-201ENST00000262018 LRP2P98164 4655 aa8.65□□□□□ -1.02
SGCA-201ENST00000262018 EIF4EBP3O60516 100 aaPredicted RBP8.65□□□□□ -1.02
SGCA-201ENST00000262018 NPC2P61916 151 aa8.65□□□□□ -1.02
SGCA-201ENST00000262018 SOSTDC1Q6X4U4 206 aa8.65□□□□□ -1.02
SGCA-201ENST00000262018 PSCAO43653 123 aa8.64□□□□□ -1.03
SGCA-201ENST00000262018 LINC00158P58513 81 aa8.64□□□□□ -1.03
SGCA-201ENST00000262018 KRTAP10-4P60372 401 aaPredicted RBP8.64□□□□□ -1.03
SGCA-201ENST00000262018 MIR7-3HGQ8N6C7 128 aa8.64□□□□□ -1.03
SGCA-201ENST00000262018 LRCOL1A6NCL2 159 aa8.63□□□□□ -1.03
SGCA-201ENST00000262018 C15orf56Q8N910 161 aa8.63□□□□□ -1.03
SGCA-201ENST00000262018 PRO0461Q9UI25 63 aa8.63□□□□□ -1.03
SGCA-201ENST00000262018 PFN2P35080 140 aa8.63□□□□□ -1.03
SGCA-201ENST00000262018 Q6ZSA8 131 aa8.63□□□□□ -1.03
SGCA-201ENST00000262018 Q8N814 137 aa8.63□□□□□ -1.03
SGCA-201ENST00000262018 PKHD1L1Q86WI1 4243 aa8.62□□□□□ -1.03
SGCA-201ENST00000262018 GVQW2A0A096LPI5 108 aaPredicted RBP8.62□□□□□ -1.03
SGCA-201ENST00000262018 F8WDY8 70 aa8.62□□□□□ -1.03
SGCA-201ENST00000262018 C10orf25Q5T742 122 aa8.62□□□□□ -1.03
SGCA-201ENST00000262018 UNQ6190/PRO20217Q6UXQ8 127 aa8.62□□□□□ -1.03
SGCA-201ENST00000262018 C2orf48Q96LS8 159 aa8.62□□□□□ -1.03
SGCA-201ENST00000262018 ZNF561-AS1K7EIQ3 104 aa8.61□□□□□ -1.03
SGCA-201ENST00000262018 TCL1BO95988 128 aa8.61□□□□□ -1.03
SGCA-201ENST00000262018 LINC00526Q96FQ7 95 aa8.61□□□□□ -1.03
SGCA-201ENST00000262018 CARD19Q96LW7 228 aa8.61□□□□□ -1.03
SGCA-201ENST00000262018 H3BT86 120 aa8.6□□□□□ -1.03
SGCA-201ENST00000262018 RPL13AP40429 203 aaKnown RBP8.6□□□□□ -1.03
SGCA-201ENST00000262018 HIGD2BQ4VC39 106 aa8.6□□□□□ -1.03
SGCA-201ENST00000262018 TRIAP1O43715 76 aa8.59□□□□□ -1.03
SGCA-201ENST00000262018 SCXQ7RTU7 201 aa8.59□□□□□ -1.03
SGCA-201ENST00000262018 TEN1Q86WV5 123 aa8.59□□□□□ -1.03
SGCA-201ENST00000262018 NDUFC2O95298 119 aa8.58□□□□□ -1.04
SGCA-201ENST00000262018 C9orf116Q5BN46 136 aaPredicted RBP8.58□□□□□ -1.04
SGCA-201ENST00000262018 SND1-IT1Q9HBX3 110 aa8.58□□□□□ -1.04
SGCA-201ENST00000262018 C6orf48Q9UBA6 75 aa8.58□□□□□ -1.04
SGCA-201ENST00000262018 TRBV10-2A0A0K0K1G8 114 aa8.57□□□□□ -1.04
SGCA-201ENST00000262018 SLC25A20O43772 301 aa8.57□□□□□ -1.04
SGCA-201ENST00000262018 WFDC2Q14508 124 aa8.57□□□□□ -1.04
SGCA-201ENST00000262018 LINC01620Q4KN68 170 aa8.57□□□□□ -1.04
SGCA-201ENST00000262018 PPDPFLQ8WWR9 84 aa8.57□□□□□ -1.04
SGCA-201ENST00000262018 CAMK2N2Q96S95 79 aa8.57□□□□□ -1.04
SGCA-201ENST00000262018 VPS25Q9BRG1 176 aa8.57□□□□□ -1.04
SGCA-201ENST00000262018 LST1O00453 97 aa8.56□□□□□ -1.04
SGCA-201ENST00000262018 RPL28P46779 137 aaKnown RBP8.56□□□□□ -1.04
SGCA-201ENST00000262018 USP17L23D6RBM5 183 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms