RNA–Protein interactions for RNA: ENST00000261965.7

TUBGCP3-201, Transcript of tubulin gamma complex associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBGCP3, Length 3,899 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP3-201ENST00000261965 GIG44P09565 113 aaPredicted RBP9.78□□□□□ -0.84
TUBGCP3-201ENST00000261965 AKAP9Q99996 3911 aa9.77□□□□□ -0.85
TUBGCP3-201ENST00000261965 IGHV3OR16-9A0A0B4J2B5 98 aa9.76□□□□□ -0.85
TUBGCP3-201ENST00000261965 FAM236DA0A1B0GTK5 79 aa9.75□□□□□ -0.85
TUBGCP3-201ENST00000261965 FAM236CP0DP71 79 aa9.75□□□□□ -0.85
TUBGCP3-201ENST00000261965 FHL2Q14192 279 aa9.75□□□□□ -0.85
TUBGCP3-201ENST00000261965 Q8N814 137 aa9.75□□□□□ -0.85
TUBGCP3-201ENST00000261965 VWFP04275 2813 aa9.75□□□□□ -0.85
TUBGCP3-201ENST00000261965 A0A087WZ39 114 aa9.75□□□□□ -0.85
TUBGCP3-201ENST00000261965 RMI2Q96E14 147 aa9.75□□□□□ -0.85
TUBGCP3-201ENST00000261965 CELA1Q9UNI1 258 aa9.75□□□□□ -0.85
TUBGCP3-201ENST00000261965 NKAPP1Q8N9T2 125 aa9.74□□□□□ -0.85
TUBGCP3-201ENST00000261965 C5orf47Q569G3 176 aa9.74□□□□□ -0.85
TUBGCP3-201ENST00000261965 NREPQ16612 68 aa9.74□□□□□ -0.85
TUBGCP3-201ENST00000261965 CYSRT1A8MQ03 144 aa9.73□□□□□ -0.85
TUBGCP3-201ENST00000261965 CMC4P56277 68 aaPredicted RBP9.73□□□□□ -0.85
TUBGCP3-201ENST00000261965 DIRC1Q969H9 104 aa9.73□□□□□ -0.85
TUBGCP3-201ENST00000261965 F8WEM9 126 aa9.73□□□□□ -0.85
TUBGCP3-201ENST00000261965 CCKP06307 115 aa9.73□□□□□ -0.85
TUBGCP3-201ENST00000261965 Q6JHZ5 121 aa9.72□□□□□ -0.85
TUBGCP3-201ENST00000261965 CYSTM1Q9H1C7 97 aa9.72□□□□□ -0.85
TUBGCP3-201ENST00000261965 PLAC8L1A1L4L8 177 aa9.72□□□□□ -0.85
TUBGCP3-201ENST00000261965 C10orf25Q5T742 122 aa9.71□□□□□ -0.85
TUBGCP3-201ENST00000261965 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.71□□□□□ -0.86
TUBGCP3-201ENST00000261965 TRBV10-3A0A0K0K1G6 114 aa9.71□□□□□ -0.86
TUBGCP3-201ENST00000261965 A0A096LNI7 61 aa9.7□□□□□ -0.86
TUBGCP3-201ENST00000261965 TMEM258P61165 79 aa9.7□□□□□ -0.86
TUBGCP3-201ENST00000261965 LINC01561Q8N1V8 128 aa9.7□□□□□ -0.86
TUBGCP3-201ENST00000261965 KRTAP1-3Q8IUG1 177 aa9.68□□□□□ -0.86
TUBGCP3-201ENST00000261965 IGLV1-51P01701 117 aa9.68□□□□□ -0.86
TUBGCP3-201ENST00000261965 COX7BP24311 80 aa9.68□□□□□ -0.86
TUBGCP3-201ENST00000261965 RPL37AP8A6NKH3 93 aa9.68□□□□□ -0.86
TUBGCP3-201ENST00000261965 CD164L2Q6UWJ8 174 aa9.67□□□□□ -0.86
TUBGCP3-201ENST00000261965 IL17DQ8TAD2 202 aa9.67□□□□□ -0.86
TUBGCP3-201ENST00000261965 NANOS2P60321 138 aaKnown RBP9.67□□□□□ -0.86
TUBGCP3-201ENST00000261965 UBE2BP63146 152 aa9.67□□□□□ -0.86
TUBGCP3-201ENST00000261965 SPATA3Q8NHX4 192 aa9.67□□□□□ -0.86
TUBGCP3-201ENST00000261965 STAB1Q9NY15 2570 aa9.66□□□□□ -0.86
TUBGCP3-201ENST00000261965 SPART-AS1P0CW21 52 aa9.65□□□□□ -0.86
TUBGCP3-201ENST00000261965 DEFB121Q5J5C9 76 aa9.65□□□□□ -0.86
TUBGCP3-201ENST00000261965 TRAV10A0A0B4J240 114 aa9.65□□□□□ -0.87
TUBGCP3-201ENST00000261965 TENM4Q6N022 2769 aa9.65□□□□□ -0.87
TUBGCP3-201ENST00000261965 Q8IZM0 81 aa9.64□□□□□ -0.87
TUBGCP3-201ENST00000261965 C19orf73Q9NVV2 129 aa9.64□□□□□ -0.87
TUBGCP3-201ENST00000261965 M0R2N4 97 aa9.64□□□□□ -0.87
TUBGCP3-201ENST00000261965 BPY2O14599 106 aa9.64□□□□□ -0.87
TUBGCP3-201ENST00000261965 Q6ZVQ6 151 aa9.63□□□□□ -0.87
TUBGCP3-201ENST00000261965 CSNK1G2-AS1Q8NCQ2 148 aa9.63□□□□□ -0.87
TUBGCP3-201ENST00000261965 C22orf24Q9Y442 160 aa9.63□□□□□ -0.87
TUBGCP3-201ENST00000261965 DEFB116Q30KQ4 102 aa9.62□□□□□ -0.87
TUBGCP3-201ENST00000261965 RETNQ9HD89 108 aa9.62□□□□□ -0.87
TUBGCP3-201ENST00000261965 CRYGAP11844 174 aa9.62□□□□□ -0.87
TUBGCP3-201ENST00000261965 LINC01547P58512 204 aaPredicted RBP9.62□□□□□ -0.87
TUBGCP3-201ENST00000261965 NSD1Q96L73 2696 aaPredicted RBP9.62□□□□□ -0.87
TUBGCP3-201ENST00000261965 APOC4P55056 127 aa9.62□□□□□ -0.87
TUBGCP3-201ENST00000261965 FAM30AQ9NZY2 134 aa9.62□□□□□ -0.87
TUBGCP3-201ENST00000261965 IGKV2-24A0A0C4DH68 120 aa9.61□□□□□ -0.87
TUBGCP3-201ENST00000261965 ZNF73O43830 326 aaPredicted RBP9.61□□□□□ -0.87
TUBGCP3-201ENST00000261965 TENM1Q9UKZ4 2725 aa9.61□□□□□ -0.87
TUBGCP3-201ENST00000261965 ETDCA0A1B0GVM5 59 aa9.59□□□□□ -0.87
TUBGCP3-201ENST00000261965 A0A0J9YWU9 116 aa9.59□□□□□ -0.87
TUBGCP3-201ENST00000261965 PDZD2O15018 2839 aa9.58□□□□□ -0.88
TUBGCP3-201ENST00000261965 LINC00575Q6W349 94 aa9.58□□□□□ -0.88
TUBGCP3-201ENST00000261965 TM2D3Q9BRN9 247 aa9.58□□□□□ -0.88
TUBGCP3-201ENST00000261965 FUSP35637 526 aaKnown RBP eCLIP9.57□□□□□ -0.88
TUBGCP3-201ENST00000261965 NDUFC2O95298 119 aa9.57□□□□□ -0.88
TUBGCP3-201ENST00000261965 KRTAP10-3P60369 221 aa9.57□□□□□ -0.88
TUBGCP3-201ENST00000261965 FAM19A3Q7Z5A8 133 aa9.57□□□□□ -0.88
TUBGCP3-201ENST00000261965 INAFM1C9JVW0 142 aa9.56□□□□□ -0.88
TUBGCP3-201ENST00000261965 HIGD2AQ9BW72 106 aa9.56□□□□□ -0.88
TUBGCP3-201ENST00000261965 LINC01600Q96MT4 127 aa9.56□□□□□ -0.88
TUBGCP3-201ENST00000261965 X6R8D5 127 aa9.56□□□□□ -0.88
TUBGCP3-201ENST00000261965 OXLD1Q5BKU9 147 aa9.55□□□□□ -0.88
TUBGCP3-201ENST00000261965 WFDC10BQ8IUB3 73 aa9.55□□□□□ -0.88
TUBGCP3-201ENST00000261965 WFDC13Q8IUB5 93 aa9.55□□□□□ -0.88
TUBGCP3-201ENST00000261965 MIFP14174 115 aa9.55□□□□□ -0.88
TUBGCP3-201ENST00000261965 MUC7Q8TAX7 377 aa9.55□□□□□ -0.88
TUBGCP3-201ENST00000261965 ATP5EP2Q5VTU8 51 aa9.54□□□□□ -0.88
TUBGCP3-201ENST00000261965 PSCAO43653 123 aa9.54□□□□□ -0.88
TUBGCP3-201ENST00000261965 LINC00474Q9P2X8 69 aa9.54□□□□□ -0.88
TUBGCP3-201ENST00000261965 C2orf48Q96LS8 159 aa9.54□□□□□ -0.88
TUBGCP3-201ENST00000261965 TRAV7A0A075B6U4 112 aa9.53□□□□□ -0.88
TUBGCP3-201ENST00000261965 KRTAP1-1Q07627 177 aa9.53□□□□□ -0.88
TUBGCP3-201ENST00000261965 OTOGQ6ZRI0 2925 aa9.52□□□□□ -0.88
TUBGCP3-201ENST00000261965 Q8NDZ9 215 aa9.52□□□□□ -0.89
TUBGCP3-201ENST00000261965 C9orf66Q5T8R8 295 aa9.51□□□□□ -0.89
TUBGCP3-201ENST00000261965 KPRPQ5T749 579 aaPredicted RBP9.51□□□□□ -0.89
TUBGCP3-201ENST00000261965 Q6ZRU5 148 aa9.5□□□□□ -0.89
TUBGCP3-201ENST00000261965 PKD1L1Q8TDX9 2849 aa9.49□□□□□ -0.89
TUBGCP3-201ENST00000261965 PSPHP1O15172 72 aa9.49□□□□□ -0.89
TUBGCP3-201ENST00000261965 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.49□□□□□ -0.89
TUBGCP3-201ENST00000261965 A0A0G2JQZ4 141 aa9.48□□□□□ -0.89
TUBGCP3-201ENST00000261965 A0A1W2PNN7 141 aa9.48□□□□□ -0.89
TUBGCP3-201ENST00000261965 LYRM9A8MSI8 78 aa9.48□□□□□ -0.89
TUBGCP3-201ENST00000261965 LY6G6DO95868 133 aa9.48□□□□□ -0.89
TUBGCP3-201ENST00000261965 Q6ZQT0 140 aa9.48□□□□□ -0.89
TUBGCP3-201ENST00000261965 TMEM254Q8TBM7 123 aa9.48□□□□□ -0.89
TUBGCP3-201ENST00000261965 TRRAPQ9Y4A5 3859 aa9.48□□□□□ -0.89
TUBGCP3-201ENST00000261965 C6orf48Q9UBA6 75 aa9.48□□□□□ -0.89
TUBGCP3-201ENST00000261965 A0A1B0GUV1 79 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms