RNA–Protein interactions for RNA: ENST00000250448.2

FOXA1-201, Transcript of forkhead box A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXA1, Length 2,862 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-201ENST00000250448 SLPIP03973 132 aa11.7□□□□□ -0.54
FOXA1-201ENST00000250448 DPH3Q96FX2 82 aa11.7□□□□□ -0.54
FOXA1-201ENST00000250448 DSCR8Q96T75 97 aa11.7□□□□□ -0.54
FOXA1-201ENST00000250448 IGKV3D-7A0A0C4DH55 119 aa11.69□□□□□ -0.54
FOXA1-201ENST00000250448 TENM3Q9P273 2699 aa11.69□□□□□ -0.54
FOXA1-201ENST00000250448 RETNQ9HD89 108 aa11.69□□□□□ -0.54
FOXA1-201ENST00000250448 ORMDL1Q9P0S3 153 aa11.69□□□□□ -0.54
FOXA1-201ENST00000250448 XCL1P47992 114 aa11.68□□□□□ -0.54
FOXA1-201ENST00000250448 RPL18AQ02543 176 aaKnown RBP11.68□□□□□ -0.54
FOXA1-201ENST00000250448 IGHV4-28A0A0C4DH34 117 aa11.67□□□□□ -0.54
FOXA1-201ENST00000250448 EGFEM1PQ0D2K5 195 aa11.67□□□□□ -0.54
FOXA1-201ENST00000250448 Q8IZM0 81 aa11.66□□□□□ -0.54
FOXA1-201ENST00000250448 SS18Q15532 418 aa11.66□□□□□ -0.54
FOXA1-201ENST00000250448 A0A0U1RQV1 116 aa11.65□□□□□ -0.54
FOXA1-201ENST00000250448 CRYGAP11844 174 aa11.65□□□□□ -0.54
FOXA1-201ENST00000250448 C1orf195Q5TG92 126 aa11.65□□□□□ -0.54
FOXA1-201ENST00000250448 CYSTM1Q9H1C7 97 aa11.65□□□□□ -0.54
FOXA1-201ENST00000250448 GYPEP15421 78 aa11.64□□□□□ -0.55
FOXA1-201ENST00000250448 LINC00167Q96N53 147 aa11.64□□□□□ -0.55
FOXA1-201ENST00000250448 CELA1Q9UNI1 258 aa11.64□□□□□ -0.55
FOXA1-201ENST00000250448 CLPSL2Q6UWE3 100 aa11.63□□□□□ -0.55
FOXA1-201ENST00000250448 hADV29S1A0JD25 119 aa11.63□□□□□ -0.55
FOXA1-201ENST00000250448 DNAH3Q8TD57 4116 aa11.63□□□□□ -0.55
FOXA1-201ENST00000250448 A0A087WVE0 104 aa11.62□□□□□ -0.55
FOXA1-201ENST00000250448 A0A1B0GUV1 79 aa11.62□□□□□ -0.55
FOXA1-201ENST00000250448 Q8NAQ8 132 aa11.62□□□□□ -0.55
FOXA1-201ENST00000250448 CCKP06307 115 aa11.62□□□□□ -0.55
FOXA1-201ENST00000250448 NANOS2P60321 138 aaKnown RBP11.62□□□□□ -0.55
FOXA1-201ENST00000250448 LINC01561Q8N1V8 128 aa11.62□□□□□ -0.55
FOXA1-201ENST00000250448 LINC00612Q8N6U2 182 aa11.61□□□□□ -0.55
FOXA1-201ENST00000250448 PRR3P79522 188 aaKnown RBP11.6□□□□□ -0.55
FOXA1-201ENST00000250448 Q8N814 137 aa11.6□□□□□ -0.55
FOXA1-201ENST00000250448 JMJD7-PLA2G4BH0Y9G9 81 aa11.59□□□□□ -0.55
FOXA1-201ENST00000250448 SERP2Q8N6R1 65 aa11.59□□□□□ -0.55
FOXA1-201ENST00000250448 NDUFC2O95298 119 aa11.58□□□□□ -0.56
FOXA1-201ENST00000250448 USP17L23D6RBM5 183 aa11.58□□□□□ -0.56
FOXA1-201ENST00000250448 HTN3P15516 51 aa11.57□□□□□ -0.56
FOXA1-201ENST00000250448 A0A096LPF7 62 aa11.57□□□□□ -0.56
FOXA1-201ENST00000250448 MIFP14174 115 aa11.57□□□□□ -0.56
FOXA1-201ENST00000250448 KIAA0087Q14695 138 aa11.57□□□□□ -0.56
FOXA1-201ENST00000250448 S100A7L2Q5SY68 101 aa11.57□□□□□ -0.56
FOXA1-201ENST00000250448 DAD1P61803 113 aa11.56□□□□□ -0.56
FOXA1-201ENST00000250448 TMEM256-PLSCR3K7ERE1 68 aa11.56□□□□□ -0.56
FOXA1-201ENST00000250448 LYRM9A8MSI8 78 aa11.55□□□□□ -0.56
FOXA1-201ENST00000250448 COX17Q14061 63 aa11.55□□□□□ -0.56
FOXA1-201ENST00000250448 PRO0255Q9UI72 69 aa11.55□□□□□ -0.56
FOXA1-201ENST00000250448 CD164L2Q6UWJ8 174 aa11.54□□□□□ -0.56
FOXA1-201ENST00000250448 UPK3BQ9BT76 320 aa11.54□□□□□ -0.56
FOXA1-201ENST00000250448 ATP5EP2Q5VTU8 51 aa11.54□□□□□ -0.56
FOXA1-201ENST00000250448 LINC00269Q8N2A0 174 aa11.53□□□□□ -0.56
FOXA1-201ENST00000250448 ZNF561-AS1K7EIQ3 104 aa11.53□□□□□ -0.56
FOXA1-201ENST00000250448 CHCHD10Q8WYQ3 142 aaPredicted RBP11.53□□□□□ -0.56
FOXA1-201ENST00000250448 SPART-AS1P0CW21 52 aa11.52□□□□□ -0.57
FOXA1-201ENST00000250448 C9orf116Q5BN46 136 aaPredicted RBP11.52□□□□□ -0.57
FOXA1-201ENST00000250448 C6orf99Q4VX62 202 aa11.51□□□□□ -0.57
FOXA1-201ENST00000250448 IGLV10-54A0A075B6I4 117 aa11.51□□□□□ -0.57
FOXA1-201ENST00000250448 K7EIL1 84 aa11.51□□□□□ -0.57
FOXA1-201ENST00000250448 TMEM258P61165 79 aa11.5□□□□□ -0.57
FOXA1-201ENST00000250448 Q8NDZ9 215 aa11.5□□□□□ -0.57
FOXA1-201ENST00000250448 Q8N3U1 123 aa11.49□□□□□ -0.57
FOXA1-201ENST00000250448 ANGP03950 147 aaKnown RBP11.49□□□□□ -0.57
FOXA1-201ENST00000250448 REG3AQ06141 175 aa11.49□□□□□ -0.57
FOXA1-201ENST00000250448 LYPD5Q6UWN5 251 aa11.48□□□□□ -0.57
FOXA1-201ENST00000250448 A0A0J9YWU9 116 aa11.47□□□□□ -0.57
FOXA1-201ENST00000250448 LINC00575Q6W349 94 aa11.47□□□□□ -0.57
FOXA1-201ENST00000250448 FAM19A1Q7Z5A9 133 aa11.47□□□□□ -0.57
FOXA1-201ENST00000250448 UBL5Q9BZL1 73 aa11.47□□□□□ -0.57
FOXA1-201ENST00000250448 GHRHP01286 108 aa11.46□□□□□ -0.57
FOXA1-201ENST00000250448 ENHOQ6UWT2 76 aa11.46□□□□□ -0.57
FOXA1-201ENST00000250448 BRK1Q8WUW1 75 aa11.46□□□□□ -0.58
FOXA1-201ENST00000250448 DNHD1Q96M86 4753 aa11.45□□□□□ -0.58
FOXA1-201ENST00000250448 TRAV23DV6A0A075B6W5 121 aa11.45□□□□□ -0.58
FOXA1-201ENST00000250448 C4orf48Q5BLP8 95 aa11.44□□□□□ -0.58
FOXA1-201ENST00000250448 Q6ZTC4 211 aa11.44□□□□□ -0.58
FOXA1-201ENST00000250448 COL7A1Q02388 2944 aa11.44□□□□□ -0.58
FOXA1-201ENST00000250448 TRBV10-3A0A0K0K1G6 114 aa11.44□□□□□ -0.58
FOXA1-201ENST00000250448 Q6ZQT0 140 aa11.43□□□□□ -0.58
FOXA1-201ENST00000250448 C10orf25Q5T742 122 aa11.43□□□□□ -0.58
FOXA1-201ENST00000250448 RBM3P98179 157 aaKnown RBP11.42□□□□□ -0.58
FOXA1-201ENST00000250448 SPAG11BQ08648 103 aa11.42□□□□□ -0.58
FOXA1-201ENST00000250448 HUWE1Q7Z6Z7 4374 aaKnown RBP11.42□□□□□ -0.58
FOXA1-201ENST00000250448 UNQ6190/PRO20217Q6UXQ8 127 aa11.42□□□□□ -0.58
FOXA1-201ENST00000250448 C6orf223Q8N319 242 aa11.42□□□□□ -0.58
FOXA1-201ENST00000250448 LOC110117498A0A087WWA1 95 aa11.41□□□□□ -0.58
FOXA1-201ENST00000250448 MUC7Q8TAX7 377 aa11.41□□□□□ -0.58
FOXA1-201ENST00000250448 LAMTOR3Q9UHA4 124 aa11.4□□□□□ -0.58
FOXA1-201ENST00000250448 STAB2Q8WWQ8 2551 aa11.4□□□□□ -0.59
FOXA1-201ENST00000250448 IGLV6-57P01721 117 aa11.38□□□□□ -0.59
FOXA1-201ENST00000250448 KPRPQ5T749 579 aaPredicted RBP11.38□□□□□ -0.59
FOXA1-201ENST00000250448 M0R2N4 97 aa11.37□□□□□ -0.59
FOXA1-201ENST00000250448 C11orf45Q8TAV5 145 aa11.37□□□□□ -0.59
FOXA1-201ENST00000250448 Q6ZQY7 126 aa11.36□□□□□ -0.59
FOXA1-201ENST00000250448 TM2D3Q9BRN9 247 aa11.36□□□□□ -0.59
FOXA1-201ENST00000250448 NDUFC2-KCTD14E9PQ53 114 aa11.34□□□□□ -0.59
FOXA1-201ENST00000250448 LINC01547P58512 204 aaPredicted RBP11.34□□□□□ -0.59
FOXA1-201ENST00000250448 LELP1Q5T871 98 aa11.34□□□□□ -0.59
FOXA1-201ENST00000250448 Q6ZVQ6 151 aa11.33□□□□□ -0.6
FOXA1-201ENST00000250448 C20orf197Q8N268 126 aa11.33□□□□□ -0.6
FOXA1-201ENST00000250448 H3BQ85 93 aa11.32□□□□□ -0.6
FOXA1-201ENST00000250448 DEFB131BA0A096LNP1 70 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms