RNA–Protein interactions for RNA: ENST00000249837.7

VPS13C-201, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VPS13C, Length 13,300 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-201ENST00000249837 Q6ZVQ6 151 aa3.19□□□□□ -1.9
VPS13C-201ENST00000249837 Q8N9L7 120 aa3.19□□□□□ -1.9
VPS13C-201ENST00000249837 FSHBP01225 129 aa3.19□□□□□ -1.9
VPS13C-201ENST00000249837 EGFEM1PQ0D2K5 195 aa3.19□□□□□ -1.9
VPS13C-201ENST00000249837 FAM30AQ9NZY2 134 aa3.19□□□□□ -1.9
VPS13C-201ENST00000249837 A0A1B0GUV1 79 aa3.19□□□□□ -1.9
VPS13C-201ENST00000249837 NDUFC2-KCTD14E9PQ53 114 aa3.19□□□□□ -1.9
VPS13C-201ENST00000249837 WFDC10BQ8IUB3 73 aa3.19□□□□□ -1.9
VPS13C-201ENST00000249837 WFDC13Q8IUB5 93 aa3.19□□□□□ -1.9
VPS13C-201ENST00000249837 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.18□□□□□ -1.9
VPS13C-201ENST00000249837 LINC00575Q6W349 94 aa3.18□□□□□ -1.9
VPS13C-201ENST00000249837 PKIGQ9Y2B9 76 aa3.18□□□□□ -1.9
VPS13C-201ENST00000249837 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.18□□□□□ -1.9
VPS13C-201ENST00000249837 SMIM26A0A096LP01 95 aa3.18□□□□□ -1.9
VPS13C-201ENST00000249837 GIG44P09565 113 aaPredicted RBP3.18□□□□□ -1.9
VPS13C-201ENST00000249837 BRK1Q8WUW1 75 aa3.18□□□□□ -1.9
VPS13C-201ENST00000249837 C16orf95Q9H693 158 aa3.18□□□□□ -1.9
VPS13C-201ENST00000249837 FAM19A3Q7Z5A8 133 aa3.18□□□□□ -1.9
VPS13C-201ENST00000249837 SPATA3Q8NHX4 192 aa3.18□□□□□ -1.9
VPS13C-201ENST00000249837 LINC01561Q8N1V8 128 aa3.18□□□□□ -1.9
VPS13C-201ENST00000249837 H0Y9J4 135 aa3.18□□□□□ -1.9
VPS13C-201ENST00000249837 SPTBN5Q9NRC6 3674 aaKnown RBP3.17□□□□□ -1.9
VPS13C-201ENST00000249837 TRAV10A0A0B4J240 114 aa3.17□□□□□ -1.9
VPS13C-201ENST00000249837 LINC01547P58512 204 aaPredicted RBP3.17□□□□□ -1.9
VPS13C-201ENST00000249837 SERP1Q9Y6X1 66 aa3.17□□□□□ -1.9
VPS13C-201ENST00000249837 Q6ZTC4 211 aa3.17□□□□□ -1.9
VPS13C-201ENST00000249837 MUC7Q8TAX7 377 aa3.17□□□□□ -1.9
VPS13C-201ENST00000249837 DHRS4-AS1Q9P1J3 65 aa3.17□□□□□ -1.9
VPS13C-201ENST00000249837 LYPD5Q6UWN5 251 aa3.16□□□□□ -1.9
VPS13C-201ENST00000249837 ZANQ9Y493 2812 aa3.16□□□□□ -1.9
VPS13C-201ENST00000249837 KIAA0087Q14695 138 aa3.16□□□□□ -1.9
VPS13C-201ENST00000249837 Q6ZRU5 148 aa3.16□□□□□ -1.9
VPS13C-201ENST00000249837 NDUFB1O75438 58 aa3.16□□□□□ -1.9
VPS13C-201ENST00000249837 C6orf48Q9UBA6 75 aa3.15□□□□□ -1.9
VPS13C-201ENST00000249837 A0A096LNT2 108 aa3.15□□□□□ -1.9
VPS13C-201ENST00000249837 C1orf137Q5JT78 98 aa3.15□□□□□ -1.9
VPS13C-201ENST00000249837 C9orf129Q5T035 196 aaKnown RBP3.15□□□□□ -1.9
VPS13C-201ENST00000249837 NDUFC1O43677 76 aa3.15□□□□□ -1.91
VPS13C-201ENST00000249837 UTP20O75691 2785 aaKnown RBP3.15□□□□□ -1.91
VPS13C-201ENST00000249837 B9D2Q9BPU9 175 aa3.14□□□□□ -1.91
VPS13C-201ENST00000249837 CRYGAP11844 174 aa3.14□□□□□ -1.91
VPS13C-201ENST00000249837 C4orf26Q17RF5 130 aa3.14□□□□□ -1.91
VPS13C-201ENST00000249837 C7orf33Q8WU49 177 aa3.14□□□□□ -1.91
VPS13C-201ENST00000249837 X6R8D5 127 aa3.14□□□□□ -1.91
VPS13C-201ENST00000249837 TACC2O95359 2948 aa3.14□□□□□ -1.91
VPS13C-201ENST00000249837 APCP25054 2843 aa3.14□□□□□ -1.91
VPS13C-201ENST00000249837 KALRNO60229 2985 aa3.14□□□□□ -1.91
VPS13C-201ENST00000249837 DEFB116Q30KQ4 102 aa3.14□□□□□ -1.91
VPS13C-201ENST00000249837 FAM104AQ969W3 186 aa3.14□□□□□ -1.91
VPS13C-201ENST00000249837 FRYLO94915 3013 aa3.13□□□□□ -1.91
VPS13C-201ENST00000249837 ESRGQ1W209 222 aa3.13□□□□□ -1.91
VPS13C-201ENST00000249837 CSNK1G2-AS1Q8NCQ2 148 aa3.13□□□□□ -1.91
VPS13C-201ENST00000249837 SPTSSBQ8NFR3 76 aa3.13□□□□□ -1.91
VPS13C-201ENST00000249837 PLAC8L1A1L4L8 177 aa3.13□□□□□ -1.91
VPS13C-201ENST00000249837 FLG2Q5D862 2391 aaPredicted RBP3.13□□□□□ -1.91
VPS13C-201ENST00000249837 IGKV4-1P06312 121 aa3.13□□□□□ -1.91
VPS13C-201ENST00000249837 ATP5EP56381 51 aaPredicted RBP3.13□□□□□ -1.91
VPS13C-201ENST00000249837 TMEM254Q8TBM7 123 aa3.13□□□□□ -1.91
VPS13C-201ENST00000249837 SVIPQ8NHG7 77 aa3.13□□□□□ -1.91
VPS13C-201ENST00000249837 TRBV7-6A0A0J9YX20 115 aa3.13□□□□□ -1.91
VPS13C-201ENST00000249837 C2orf48Q96LS8 159 aa3.12□□□□□ -1.91
VPS13C-201ENST00000249837 PRYO14603 147 aa3.12□□□□□ -1.91
VPS13C-201ENST00000249837 SZT2Q5T011 3432 aa3.12□□□□□ -1.91
VPS13C-201ENST00000249837 ST20-AS1Q8NBB2 130 aa3.12□□□□□ -1.91
VPS13C-201ENST00000249837 Q6ZQT0 140 aa3.12□□□□□ -1.91
VPS13C-201ENST00000249837 CELSR3Q9NYQ7 3312 aa3.12□□□□□ -1.91
VPS13C-201ENST00000249837 C14orf177Q52M58 125 aa3.12□□□□□ -1.91
VPS13C-201ENST00000249837 LINC00208Q96KT6 92 aa3.12□□□□□ -1.91
VPS13C-201ENST00000249837 RPS28P62857 69 aaKnown RBP3.12□□□□□ -1.91
VPS13C-201ENST00000249837 LOC110117498A0A087WWA1 95 aa3.12□□□□□ -1.91
VPS13C-201ENST00000249837 SPINK6Q6UWN8 80 aa3.12□□□□□ -1.91
VPS13C-201ENST00000249837 IL17DQ8TAD2 202 aa3.12□□□□□ -1.91
VPS13C-201ENST00000249837 C19orf73Q9NVV2 129 aa3.12□□□□□ -1.91
VPS13C-201ENST00000249837 HIVEP1P15822 2718 aa3.11□□□□□ -1.91
VPS13C-201ENST00000249837 IGLV6-57P01721 117 aa3.11□□□□□ -1.91
VPS13C-201ENST00000249837 CXCL6P80162 114 aa3.11□□□□□ -1.91
VPS13C-201ENST00000249837 LINC00167Q96N53 147 aa3.11□□□□□ -1.91
VPS13C-201ENST00000249837 M0R2N4 97 aa3.11□□□□□ -1.91
VPS13C-201ENST00000249837 IGLV9-49A0A0B4J1Y8 123 aa3.11□□□□□ -1.91
VPS13C-201ENST00000249837 LAMA1P25391 3075 aa3.11□□□□□ -1.91
VPS13C-201ENST00000249837 PRLHP81277 87 aa3.11□□□□□ -1.91
VPS13C-201ENST00000249837 LRBAP50851 2863 aa3.11□□□□□ -1.91
VPS13C-201ENST00000249837 C1orf195Q5TG92 126 aa3.1□□□□□ -1.91
VPS13C-201ENST00000249837 A0A087WSZ3 146 aa3.1□□□□□ -1.91
VPS13C-201ENST00000249837 REG3GQ6UW15 175 aa3.1□□□□□ -1.91
VPS13C-201ENST00000249837 PSPHP1O15172 72 aa3.1□□□□□ -1.91
VPS13C-201ENST00000249837 Q8NAQ8 132 aa3.1□□□□□ -1.91
VPS13C-201ENST00000249837 C22orf24Q9Y442 160 aa3.1□□□□□ -1.91
VPS13C-201ENST00000249837 CELSR2Q9HCU4 2923 aa3.09□□□□□ -1.91
VPS13C-201ENST00000249837 Q9BRP9 147 aa3.09□□□□□ -1.91
VPS13C-201ENST00000249837 VPREB1P12018 145 aa3.09□□□□□ -1.91
VPS13C-201ENST00000249837 KRTAP10-3P60369 221 aa3.09□□□□□ -1.91
VPS13C-201ENST00000249837 FREM2Q5SZK8 3169 aa3.09□□□□□ -1.91
VPS13C-201ENST00000249837 NF1P21359 2839 aa3.09□□□□□ -1.91
VPS13C-201ENST00000249837 FAM168BA1KXE4 195 aa3.09□□□□□ -1.91
VPS13C-201ENST00000249837 CHKB-CPT1BH3BT56 60 aa3.09□□□□□ -1.91
VPS13C-201ENST00000249837 MRPL55Q7Z7F7 128 aaKnown RBP3.09□□□□□ -1.91
VPS13C-201ENST00000249837 HRNRQ86YZ3 2850 aaPredicted RBP3.09□□□□□ -1.91
VPS13C-201ENST00000249837 VCANP13611 3396 aa3.09□□□□□ -1.92
VPS13C-201ENST00000249837 A6NED7 52 aa3.09□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms