RNA–Protein interactions for RNA: ENST00000249064.8

CCDC117-201, Transcript of coiled-coil domain containing 117, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC117, Length 3,985 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC117-201ENST00000249064 FAM30AQ9NZY2 134 aa9.38□□□□□ -0.91
CCDC117-201ENST00000249064 HIGD2BQ4VC39 106 aa9.37□□□□□ -0.91
CCDC117-201ENST00000249064 MXRA5Q9NR99 2828 aa9.37□□□□□ -0.91
CCDC117-201ENST00000249064 C11orf72Q8NBR9 251 aa9.37□□□□□ -0.91
CCDC117-201ENST00000249064 ZNF561-AS1K7EIQ3 104 aa9.36□□□□□ -0.91
CCDC117-201ENST00000249064 TMEM254Q8TBM7 123 aa9.36□□□□□ -0.91
CCDC117-201ENST00000249064 SPAG11BQ08648 103 aa9.35□□□□□ -0.91
CCDC117-201ENST00000249064 C1orf158Q8N1D5 194 aa9.35□□□□□ -0.91
CCDC117-201ENST00000249064 ATRQ13535 2644 aa9.35□□□□□ -0.91
CCDC117-201ENST00000249064 FAM19A3Q7Z5A8 133 aa9.35□□□□□ -0.91
CCDC117-201ENST00000249064 TRBV6-8A0A0A6YYG3 113 aa9.34□□□□□ -0.91
CCDC117-201ENST00000249064 DIRC1Q969H9 104 aa9.34□□□□□ -0.91
CCDC117-201ENST00000249064 HELZ2Q9BYK8 2649 aaKnown RBP9.34□□□□□ -0.91
CCDC117-201ENST00000249064 Q5XG85 94 aa9.34□□□□□ -0.91
CCDC117-201ENST00000249064 PMAIP1Q13794 54 aa9.33□□□□□ -0.92
CCDC117-201ENST00000249064 LINC00959A0A1B0GUT2 108 aa9.33□□□□□ -0.92
CCDC117-201ENST00000249064 IL17DQ8TAD2 202 aa9.33□□□□□ -0.92
CCDC117-201ENST00000249064 MRPL55Q7Z7F7 128 aaKnown RBP9.32□□□□□ -0.92
CCDC117-201ENST00000249064 KLK12Q9UKR0 248 aa9.32□□□□□ -0.92
CCDC117-201ENST00000249064 NDUFC1O43677 76 aa9.31□□□□□ -0.92
CCDC117-201ENST00000249064 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.31□□□□□ -0.92
CCDC117-201ENST00000249064 H7BZZ5 65 aa9.31□□□□□ -0.92
CCDC117-201ENST00000249064 CHCHD10Q8WYQ3 142 aaPredicted RBP9.31□□□□□ -0.92
CCDC117-201ENST00000249064 SMR3AQ99954 134 aa9.31□□□□□ -0.92
CCDC117-201ENST00000249064 HIGD2AQ9BW72 106 aa9.31□□□□□ -0.92
CCDC117-201ENST00000249064 LINC00482Q8N8I6 264 aa9.3□□□□□ -0.92
CCDC117-201ENST00000249064 COX7BP24311 80 aa9.3□□□□□ -0.92
CCDC117-201ENST00000249064 WIPF1O43516 503 aa9.3□□□□□ -0.92
CCDC117-201ENST00000249064 UNQ6190/PRO20217Q6UXQ8 127 aa9.29□□□□□ -0.92
CCDC117-201ENST00000249064 LINC01006Q8NI28 216 aa9.29□□□□□ -0.92
CCDC117-201ENST00000249064 PRYO14603 147 aa9.28□□□□□ -0.92
CCDC117-201ENST00000249064 DEFB135Q30KP9 77 aa9.28□□□□□ -0.92
CCDC117-201ENST00000249064 BEAN1Q3B7T3 259 aa9.28□□□□□ -0.92
CCDC117-201ENST00000249064 IGLV5-45A0A087WSX0 123 aa9.28□□□□□ -0.92
CCDC117-201ENST00000249064 SETXQ7Z333 2677 aaKnown RBP9.28□□□□□ -0.92
CCDC117-201ENST00000249064 NKAPP1Q8N9T2 125 aa9.28□□□□□ -0.92
CCDC117-201ENST00000249064 C16orf74Q96GX8 76 aa9.28□□□□□ -0.92
CCDC117-201ENST00000249064 CAMK2N2Q96S95 79 aa9.28□□□□□ -0.92
CCDC117-201ENST00000249064 ESRGQ1W209 222 aa9.27□□□□□ -0.92
CCDC117-201ENST00000249064 ITPR2Q14571 2701 aa9.27□□□□□ -0.93
CCDC117-201ENST00000249064 A0A0J9YWU9 116 aa9.27□□□□□ -0.93
CCDC117-201ENST00000249064 PDE6GP18545 87 aa9.27□□□□□ -0.93
CCDC117-201ENST00000249064 C6orf223Q8N319 242 aa9.27□□□□□ -0.93
CCDC117-201ENST00000249064 REG3AQ06141 175 aa9.26□□□□□ -0.93
CCDC117-201ENST00000249064 CHKB-CPT1BH3BT56 60 aa9.26□□□□□ -0.93
CCDC117-201ENST00000249064 M0R2N4 97 aa9.26□□□□□ -0.93
CCDC117-201ENST00000249064 UBR5O95071 2799 aaPredicted RBP9.26□□□□□ -0.93
CCDC117-201ENST00000249064 FAM104AQ969W3 186 aa9.25□□□□□ -0.93
CCDC117-201ENST00000249064 IGHV3OR16-9A0A0B4J2B5 98 aa9.25□□□□□ -0.93
CCDC117-201ENST00000249064 CR1P17927 2039 aa9.25□□□□□ -0.93
CCDC117-201ENST00000249064 TRBV10-3A0A0K0K1G6 114 aa9.24□□□□□ -0.93
CCDC117-201ENST00000249064 DEFB116Q30KQ4 102 aa9.24□□□□□ -0.93
CCDC117-201ENST00000249064 MUC7Q8TAX7 377 aa9.24□□□□□ -0.93
CCDC117-201ENST00000249064 CMC4P56277 68 aaPredicted RBP9.24□□□□□ -0.93
CCDC117-201ENST00000249064 WFDC13Q8IUB5 93 aa9.23□□□□□ -0.93
CCDC117-201ENST00000249064 NIPBLQ6KC79 2804 aaeCLIP9.23□□□□□ -0.93
CCDC117-201ENST00000249064 LINC00575Q6W349 94 aa9.23□□□□□ -0.93
CCDC117-201ENST00000249064 WFDC10BQ8IUB3 73 aa9.23□□□□□ -0.93
CCDC117-201ENST00000249064 ATP5EP56381 51 aaPredicted RBP9.22□□□□□ -0.93
CCDC117-201ENST00000249064 SPATA3Q8NHX4 192 aa9.22□□□□□ -0.93
CCDC117-201ENST00000249064 LINC01600Q96MT4 127 aa9.22□□□□□ -0.93
CCDC117-201ENST00000249064 NBPF19A0A087WUL8 3843 aa9.21□□□□□ -0.93
CCDC117-201ENST00000249064 ZNF469Q96JG9 3925 aaPredicted RBP9.21□□□□□ -0.93
CCDC117-201ENST00000249064 MP68P56378 58 aa9.2□□□□□ -0.94
CCDC117-201ENST00000249064 UBE2BP63146 152 aa9.2□□□□□ -0.94
CCDC117-201ENST00000249064 A0A096LNT2 108 aa9.2□□□□□ -0.94
CCDC117-201ENST00000249064 CYSRT1A8MQ03 144 aa9.2□□□□□ -0.94
CCDC117-201ENST00000249064 Q6ZQT0 140 aa9.2□□□□□ -0.94
CCDC117-201ENST00000249064 C22orf24Q9Y442 160 aa9.2□□□□□ -0.94
CCDC117-201ENST00000249064 APCP25054 2843 aa9.19□□□□□ -0.94
CCDC117-201ENST00000249064 A6NED7 52 aa9.19□□□□□ -0.94
CCDC117-201ENST00000249064 ZNF73O43830 326 aaPredicted RBP9.19□□□□□ -0.94
CCDC117-201ENST00000249064 Q8IZM0 81 aa9.19□□□□□ -0.94
CCDC117-201ENST00000249064 UNC79Q9P2D8 2635 aa9.19□□□□□ -0.94
CCDC117-201ENST00000249064 TEP1Q99973 2627 aaKnown RBP9.18□□□□□ -0.94
CCDC117-201ENST00000249064 FP248Q71RG6 208 aaPredicted RBP9.18□□□□□ -0.94
CCDC117-201ENST00000249064 IGKV2D-24A0A075B6R9 120 aa9.18□□□□□ -0.94
CCDC117-201ENST00000249064 PRO0255Q9UI72 69 aa9.18□□□□□ -0.94
CCDC117-201ENST00000249064 LYPD5Q6UWN5 251 aa9.17□□□□□ -0.94
CCDC117-201ENST00000249064 A0A096LNI7 61 aa9.17□□□□□ -0.94
CCDC117-201ENST00000249064 F8WDY8 70 aa9.16□□□□□ -0.94
CCDC117-201ENST00000249064 CD164L2Q6UWJ8 174 aa9.16□□□□□ -0.94
CCDC117-201ENST00000249064 ETDCA0A1B0GVM5 59 aa9.16□□□□□ -0.94
CCDC117-201ENST00000249064 KLKP1Q107X0 134 aa9.15□□□□□ -0.94
CCDC117-201ENST00000249064 SMIM29Q86T20 159 aa9.15□□□□□ -0.94
CCDC117-201ENST00000249064 C10orf25Q5T742 122 aa9.14□□□□□ -0.95
CCDC117-201ENST00000249064 FSHBP01225 129 aa9.14□□□□□ -0.95
CCDC117-201ENST00000249064 J3QKU1 62 aa9.14□□□□□ -0.95
CCDC117-201ENST00000249064 PRR15LQ9BU68 103 aa9.14□□□□□ -0.95
CCDC117-201ENST00000249064 IGLV1-51P01701 117 aa9.13□□□□□ -0.95
CCDC117-201ENST00000249064 LINC00208Q96KT6 92 aa9.13□□□□□ -0.95
CCDC117-201ENST00000249064 RPL37AP8A6NKH3 93 aa9.13□□□□□ -0.95
CCDC117-201ENST00000249064 FAM229BQ4G0N7 80 aa9.13□□□□□ -0.95
CCDC117-201ENST00000249064 CXCL6P80162 114 aa9.12□□□□□ -0.95
CCDC117-201ENST00000249064 INAFM1C9JVW0 142 aa9.12□□□□□ -0.95
CCDC117-201ENST00000249064 NDUFS5O43920 106 aa9.11□□□□□ -0.95
CCDC117-201ENST00000249064 A8MUN3 132 aa9.1□□□□□ -0.95
CCDC117-201ENST00000249064 MAST4O15021 2626 aa9.09□□□□□ -0.95
CCDC117-201ENST00000249064 GIG44P09565 113 aaPredicted RBP9.08□□□□□ -0.96
CCDC117-201ENST00000249064 NOTCH1P46531 2555 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms