RNA–Protein interactions for RNA: ENST00000248054.9

SIN3B-201, Transcript of SIN3 transcription regulator family member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SIN3B, Length 5,037 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-201ENST00000248054 SETD2Q9BYW2 2564 aaPredicted RBP10.97□□□□□ -0.65
SIN3B-201ENST00000248054 C7orf33Q8WU49 177 aa10.96□□□□□ -0.65
SIN3B-201ENST00000248054 LINC00575Q6W349 94 aa10.95□□□□□ -0.66
SIN3B-201ENST00000248054 C1orf137Q5JT78 98 aa10.95□□□□□ -0.66
SIN3B-201ENST00000248054 WFDC13Q8IUB5 93 aa10.95□□□□□ -0.66
SIN3B-201ENST00000248054 SPTSSBQ8NFR3 76 aa10.95□□□□□ -0.66
SIN3B-201ENST00000248054 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.95□□□□□ -0.66
SIN3B-201ENST00000248054 A0A096LNI7 61 aa10.95□□□□□ -0.66
SIN3B-201ENST00000248054 FRYLO94915 3013 aa10.95□□□□□ -0.66
SIN3B-201ENST00000248054 BCE1O60756 84 aa10.95□□□□□ -0.66
SIN3B-201ENST00000248054 FASNP49327 2511 aaKnown RBP10.94□□□□□ -0.66
SIN3B-201ENST00000248054 ZNF292O60281 2723 aa10.94□□□□□ -0.66
SIN3B-201ENST00000248054 EIF4EBP3O60516 100 aaPredicted RBP10.94□□□□□ -0.66
SIN3B-201ENST00000248054 FAM218AQ96MZ4 157 aa10.94□□□□□ -0.66
SIN3B-201ENST00000248054 PRYO14603 147 aa10.94□□□□□ -0.66
SIN3B-201ENST00000248054 LINC01556Q5JQF7 62 aa10.93□□□□□ -0.66
SIN3B-201ENST00000248054 Q8N9L7 120 aa10.93□□□□□ -0.66
SIN3B-201ENST00000248054 LITAFQ99732 161 aa10.93□□□□□ -0.66
SIN3B-201ENST00000248054 C10orf25Q5T742 122 aa10.93□□□□□ -0.66
SIN3B-201ENST00000248054 CXCL6P80162 114 aa10.92□□□□□ -0.66
SIN3B-201ENST00000248054 Q8NAQ8 132 aa10.92□□□□□ -0.66
SIN3B-201ENST00000248054 RPL37AP8A6NKH3 93 aa10.92□□□□□ -0.66
SIN3B-201ENST00000248054 LINC00337Q8N6G1 96 aa10.92□□□□□ -0.66
SIN3B-201ENST00000248054 CSNK1G2-AS1Q8NCQ2 148 aa10.91□□□□□ -0.66
SIN3B-201ENST00000248054 PLAC8L1A1L4L8 177 aa10.91□□□□□ -0.66
SIN3B-201ENST00000248054 C9orf116Q5BN46 136 aaPredicted RBP10.91□□□□□ -0.66
SIN3B-201ENST00000248054 Q8N3U1 123 aa10.91□□□□□ -0.66
SIN3B-201ENST00000248054 REG3GQ6UW15 175 aa10.91□□□□□ -0.66
SIN3B-201ENST00000248054 WIPF1O43516 503 aa10.91□□□□□ -0.66
SIN3B-201ENST00000248054 ACANP16112 2415 aa10.9□□□□□ -0.66
SIN3B-201ENST00000248054 WDFY4Q6ZS81 3184 aa10.9□□□□□ -0.66
SIN3B-201ENST00000248054 TRBV7-6A0A0J9YX20 115 aa10.89□□□□□ -0.67
SIN3B-201ENST00000248054 FAM30AQ9NZY2 134 aa10.89□□□□□ -0.67
SIN3B-201ENST00000248054 KRTAP1-1Q07627 177 aa10.88□□□□□ -0.67
SIN3B-201ENST00000248054 Q6ZVQ6 151 aa10.88□□□□□ -0.67
SIN3B-201ENST00000248054 K7ERS5 55 aa10.88□□□□□ -0.67
SIN3B-201ENST00000248054 A0A1B0GW54 56 aa10.87□□□□□ -0.67
SIN3B-201ENST00000248054 Q9UF83 564 aa10.87□□□□□ -0.67
SIN3B-201ENST00000248054 PRR3P79522 188 aaKnown RBP10.87□□□□□ -0.67
SIN3B-201ENST00000248054 C19orf73Q9NVV2 129 aa10.86□□□□□ -0.67
SIN3B-201ENST00000248054 MUC4Q99102 2169 aa10.86□□□□□ -0.67
SIN3B-201ENST00000248054 LINC00336Q6ZUF6 198 aa10.85□□□□□ -0.67
SIN3B-201ENST00000248054 A6NED7 52 aa10.85□□□□□ -0.67
SIN3B-201ENST00000248054 C6orf223Q8N319 242 aa10.85□□□□□ -0.67
SIN3B-201ENST00000248054 LINC01547P58512 204 aaPredicted RBP10.84□□□□□ -0.67
SIN3B-201ENST00000248054 ESRGQ1W209 222 aa10.84□□□□□ -0.67
SIN3B-201ENST00000248054 LRCOL1A6NCL2 159 aa10.83□□□□□ -0.68
SIN3B-201ENST00000248054 M0R2N4 97 aa10.83□□□□□ -0.68
SIN3B-201ENST00000248054 ZNF575Q86XF7 245 aa10.82□□□□□ -0.68
SIN3B-201ENST00000248054 TMEM254Q8TBM7 123 aa10.82□□□□□ -0.68
SIN3B-201ENST00000248054 Q6ZRU5 148 aa10.82□□□□□ -0.68
SIN3B-201ENST00000248054 CFAP54Q96N23 3096 aa10.82□□□□□ -0.68
SIN3B-201ENST00000248054 LINC00612Q8N6U2 182 aa10.81□□□□□ -0.68
SIN3B-201ENST00000248054 LY6G6CO95867 125 aa10.81□□□□□ -0.68
SIN3B-201ENST00000248054 LINC00208Q96KT6 92 aa10.8□□□□□ -0.68
SIN3B-201ENST00000248054 GIG44P09565 113 aaPredicted RBP10.8□□□□□ -0.68
SIN3B-201ENST00000248054 LINC01600Q96MT4 127 aa10.79□□□□□ -0.68
SIN3B-201ENST00000248054 KRTAP10-3P60369 221 aa10.78□□□□□ -0.68
SIN3B-201ENST00000248054 hDV103S1A0JD37 113 aa10.77□□□□□ -0.68
SIN3B-201ENST00000248054 IGLV9-49A0A0B4J1Y8 123 aa10.77□□□□□ -0.69
SIN3B-201ENST00000248054 PRR4Q16378 134 aa10.77□□□□□ -0.69
SIN3B-201ENST00000248054 SPINK6Q6UWN8 80 aa10.77□□□□□ -0.69
SIN3B-201ENST00000248054 Q9BRP9 147 aa10.76□□□□□ -0.69
SIN3B-201ENST00000248054 HCG22E2RYF7 251 aa10.76□□□□□ -0.69
SIN3B-201ENST00000248054 CELSR3Q9NYQ7 3312 aa10.74□□□□□ -0.69
SIN3B-201ENST00000248054 LOC110117498A0A087WWA1 95 aa10.74□□□□□ -0.69
SIN3B-201ENST00000248054 GVQW2A0A096LPI5 108 aaPredicted RBP10.74□□□□□ -0.69
SIN3B-201ENST00000248054 PMAIP1Q13794 54 aa10.74□□□□□ -0.69
SIN3B-201ENST00000248054 MUC3AQ02505 3323 aa10.73□□□□□ -0.69
SIN3B-201ENST00000248054 C6orf48Q9UBA6 75 aa10.73□□□□□ -0.69
SIN3B-201ENST00000248054 SPATA3Q8NHX4 192 aa10.72□□□□□ -0.69
SIN3B-201ENST00000248054 F8P00451 2351 aa10.72□□□□□ -0.69
SIN3B-201ENST00000248054 PSPHP1O15172 72 aa10.72□□□□□ -0.69
SIN3B-201ENST00000248054 CYSTM1Q9H1C7 97 aa10.72□□□□□ -0.69
SIN3B-201ENST00000248054 A0A087WSZ3 146 aa10.71□□□□□ -0.69
SIN3B-201ENST00000248054 C1orf134Q5TEV5 83 aa10.71□□□□□ -0.7
SIN3B-201ENST00000248054 DNAH10OSP0CZ25 163 aa10.7□□□□□ -0.7
SIN3B-201ENST00000248054 H0Y9P7 68 aa10.7□□□□□ -0.7
SIN3B-201ENST00000248054 IGLV5-52A0A0A0MRZ9 124 aa10.69□□□□□ -0.7
SIN3B-201ENST00000248054 ELOF1P60002 83 aaKnown RBP10.69□□□□□ -0.7
SIN3B-201ENST00000248054 Q5XG85 94 aa10.68□□□□□ -0.7
SIN3B-201ENST00000248054 FREM2Q5SZK8 3169 aa10.68□□□□□ -0.7
SIN3B-201ENST00000248054 KRTAP10-11P60412 298 aa10.67□□□□□ -0.7
SIN3B-201ENST00000248054 C22orf24Q9Y442 160 aa10.67□□□□□ -0.7
SIN3B-201ENST00000248054 C9orf129Q5T035 196 aaKnown RBP10.66□□□□□ -0.7
SIN3B-201ENST00000248054 Q6ZQT0 140 aa10.66□□□□□ -0.7
SIN3B-201ENST00000248054 MDFIQ99750 246 aa10.66□□□□□ -0.7
SIN3B-201ENST00000248054 LINC00588Q9Y4M8 146 aa10.66□□□□□ -0.7
SIN3B-201ENST00000248054 DMDP11532 3685 aa10.65□□□□□ -0.7
SIN3B-201ENST00000248054 H7BZZ5 65 aa10.65□□□□□ -0.7
SIN3B-201ENST00000248054 PRR34Q9NV39 138 aa10.65□□□□□ -0.7
SIN3B-201ENST00000248054 H3BPC8 53 aa10.65□□□□□ -0.71
SIN3B-201ENST00000248054 TM2D3Q9BRN9 247 aa10.64□□□□□ -0.71
SIN3B-201ENST00000248054 KIAA0087Q14695 138 aa10.64□□□□□ -0.71
SIN3B-201ENST00000248054 IGHV6-1A0A0B4J1U7 121 aa10.63□□□□□ -0.71
SIN3B-201ENST00000248054 LIMD2Q9BT23 127 aa10.63□□□□□ -0.71
SIN3B-201ENST00000248054 TP53AIP1Q9HCN2 124 aa10.63□□□□□ -0.71
SIN3B-201ENST00000248054 HECTD1Q9ULT8 2610 aa10.63□□□□□ -0.71
SIN3B-201ENST00000248054 CR1P17927 2039 aa10.62□□□□□ -0.71
SIN3B-201ENST00000248054 FLNAP21333 2647 aaKnown RBP10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 156 ms