RNA–Protein interactions for RNA: ENST00000246117.8

NCLN-201, Transcript of nicalin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCLN, Length 4,005 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLN-201ENST00000246117 C10orf25Q5T742 122 aa9.54□□□□□ -0.88
NCLN-201ENST00000246117 MIFP14174 115 aa9.53□□□□□ -0.88
NCLN-201ENST00000246117 FSHBP01225 129 aa9.53□□□□□ -0.88
NCLN-201ENST00000246117 FAM19A5Q7Z5A7 132 aaPredicted RBP9.52□□□□□ -0.89
NCLN-201ENST00000246117 HIGD2AQ9BW72 106 aa9.52□□□□□ -0.89
NCLN-201ENST00000246117 FAM19A1Q7Z5A9 133 aa9.52□□□□□ -0.89
NCLN-201ENST00000246117 SNURFQ9Y675 71 aa9.52□□□□□ -0.89
NCLN-201ENST00000246117 A0A0J9YWU9 116 aa9.51□□□□□ -0.89
NCLN-201ENST00000246117 CITED1Q99966 193 aa9.51□□□□□ -0.89
NCLN-201ENST00000246117 LELP1Q5T871 98 aa9.51□□□□□ -0.89
NCLN-201ENST00000246117 GIG44P09565 113 aaPredicted RBP9.5□□□□□ -0.89
NCLN-201ENST00000246117 UQCRQO14949 82 aa9.5□□□□□ -0.89
NCLN-201ENST00000246117 KIR2DL5BQ8NHK3 375 aa9.5□□□□□ -0.89
NCLN-201ENST00000246117 CCKP06307 115 aa9.5□□□□□ -0.89
NCLN-201ENST00000246117 IGLV5-45A0A087WSX0 123 aa9.49□□□□□ -0.89
NCLN-201ENST00000246117 C3orf22Q8N5N4 141 aa9.49□□□□□ -0.89
NCLN-201ENST00000246117 Q8N814 137 aa9.49□□□□□ -0.89
NCLN-201ENST00000246117 SPATA3Q8NHX4 192 aa9.48□□□□□ -0.89
NCLN-201ENST00000246117 CR1P17927 2039 aa9.48□□□□□ -0.89
NCLN-201ENST00000246117 SYCNQ0VAF6 134 aa9.48□□□□□ -0.89
NCLN-201ENST00000246117 SBSPONQ8IVN8 264 aa9.48□□□□□ -0.89
NCLN-201ENST00000246117 SHISA2Q6UWI4 295 aa9.47□□□□□ -0.89
NCLN-201ENST00000246117 X6R8D5 127 aa9.47□□□□□ -0.89
NCLN-201ENST00000246117 ZNF73O43830 326 aaPredicted RBP9.47□□□□□ -0.89
NCLN-201ENST00000246117 FUSP35637 526 aaKnown RBP eCLIP9.46□□□□□ -0.89
NCLN-201ENST00000246117 FAM240AA0A1B0GVK7 77 aa9.45□□□□□ -0.9
NCLN-201ENST00000246117 FAM104AQ969W3 186 aa9.45□□□□□ -0.9
NCLN-201ENST00000246117 PPDPFQ9H3Y8 114 aa9.45□□□□□ -0.9
NCLN-201ENST00000246117 C9orf129Q5T035 196 aaKnown RBP9.44□□□□□ -0.9
NCLN-201ENST00000246117 Q8N9L7 120 aa9.44□□□□□ -0.9
NCLN-201ENST00000246117 LOC107984640A0A0U1RRK4 108 aa9.44□□□□□ -0.9
NCLN-201ENST00000246117 CSMD2Q7Z408 3487 aa9.43□□□□□ -0.9
NCLN-201ENST00000246117 SMCR5Q8TEV8 140 aa9.43□□□□□ -0.9
NCLN-201ENST00000246117 C16orf95Q9H693 158 aa9.43□□□□□ -0.9
NCLN-201ENST00000246117 A0A1B0GUV1 79 aa9.42□□□□□ -0.9
NCLN-201ENST00000246117 PLAC8L1A1L4L8 177 aa9.42□□□□□ -0.9
NCLN-201ENST00000246117 BPY2O14599 106 aa9.42□□□□□ -0.9
NCLN-201ENST00000246117 COX7CP15954 63 aa9.42□□□□□ -0.9
NCLN-201ENST00000246117 PRR4Q16378 134 aa9.42□□□□□ -0.9
NCLN-201ENST00000246117 LYPD5Q6UWN5 251 aa9.42□□□□□ -0.9
NCLN-201ENST00000246117 Q6ZRU5 148 aa9.42□□□□□ -0.9
NCLN-201ENST00000246117 J3KT08 172 aa9.4□□□□□ -0.9
NCLN-201ENST00000246117 SERP2Q8N6R1 65 aa9.4□□□□□ -0.9
NCLN-201ENST00000246117 Q6Q795 121 aa9.4□□□□□ -0.9
NCLN-201ENST00000246117 CSNK1G2-AS1Q8NCQ2 148 aa9.4□□□□□ -0.9
NCLN-201ENST00000246117 KRTAP10-3P60369 221 aa9.39□□□□□ -0.91
NCLN-201ENST00000246117 IMUPQ9GZP8 106 aa9.39□□□□□ -0.91
NCLN-201ENST00000246117 C19orf73Q9NVV2 129 aa9.39□□□□□ -0.91
NCLN-201ENST00000246117 M0R2N4 97 aa9.39□□□□□ -0.91
NCLN-201ENST00000246117 RMI2Q96E14 147 aa9.39□□□□□ -0.91
NCLN-201ENST00000246117 KRTAP1-3Q8IUG1 177 aa9.39□□□□□ -0.91
NCLN-201ENST00000246117 NHLRC4P0CG21 123 aaPredicted RBP9.37□□□□□ -0.91
NCLN-201ENST00000246117 DEFB116Q30KQ4 102 aa9.37□□□□□ -0.91
NCLN-201ENST00000246117 COX17Q14061 63 aa9.37□□□□□ -0.91
NCLN-201ENST00000246117 C6orf48Q9UBA6 75 aa9.36□□□□□ -0.91
NCLN-201ENST00000246117 M0R378 163 aa9.35□□□□□ -0.91
NCLN-201ENST00000246117 LINC00575Q6W349 94 aa9.35□□□□□ -0.91
NCLN-201ENST00000246117 Q6JHZ5 121 aa9.35□□□□□ -0.91
NCLN-201ENST00000246117 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.35□□□□□ -0.91
NCLN-201ENST00000246117 MPLKIPQ8TAP9 179 aa9.35□□□□□ -0.91
NCLN-201ENST00000246117 ESRGQ1W209 222 aa9.34□□□□□ -0.91
NCLN-201ENST00000246117 KMT2BQ9UMN6 2715 aaPredicted RBP9.34□□□□□ -0.91
NCLN-201ENST00000246117 UBE2AP49459 152 aa9.34□□□□□ -0.92
NCLN-201ENST00000246117 NDUFS5O43920 106 aa9.33□□□□□ -0.92
NCLN-201ENST00000246117 M0QXV9 152 aa9.33□□□□□ -0.92
NCLN-201ENST00000246117 LRCOL1A6NCL2 159 aa9.33□□□□□ -0.92
NCLN-201ENST00000246117 TRBV7-7A0A0K0K1E9 115 aa9.32□□□□□ -0.92
NCLN-201ENST00000246117 WFDC13Q8IUB5 93 aa9.32□□□□□ -0.92
NCLN-201ENST00000246117 STAB2Q8WWQ8 2551 aa9.32□□□□□ -0.92
NCLN-201ENST00000246117 Q6ZVQ6 151 aa9.31□□□□□ -0.92
NCLN-201ENST00000246117 Q8NAQ8 132 aa9.31□□□□□ -0.92
NCLN-201ENST00000246117 PDE6GP18545 87 aa9.3□□□□□ -0.92
NCLN-201ENST00000246117 EGFEM1PQ0D2K5 195 aa9.3□□□□□ -0.92
NCLN-201ENST00000246117 FAM236DA0A1B0GTK5 79 aa9.29□□□□□ -0.92
NCLN-201ENST00000246117 NDUFC2-KCTD14E9PQ53 114 aa9.29□□□□□ -0.92
NCLN-201ENST00000246117 FAM236CP0DP71 79 aa9.29□□□□□ -0.92
NCLN-201ENST00000246117 FAM30AQ9NZY2 134 aa9.29□□□□□ -0.92
NCLN-201ENST00000246117 H0Y9J4 135 aa9.29□□□□□ -0.92
NCLN-201ENST00000246117 CDK2AP2O75956 126 aa9.29□□□□□ -0.92
NCLN-201ENST00000246117 IL17DQ8TAD2 202 aa9.29□□□□□ -0.92
NCLN-201ENST00000246117 MUC7Q8TAX7 377 aa9.28□□□□□ -0.92
NCLN-201ENST00000246117 NDUFC2O95298 119 aa9.28□□□□□ -0.92
NCLN-201ENST00000246117 KRTAP1-1Q07627 177 aa9.28□□□□□ -0.92
NCLN-201ENST00000246117 HRCT1Q6UXD1 115 aa9.28□□□□□ -0.92
NCLN-201ENST00000246117 PDZD2O15018 2839 aa9.28□□□□□ -0.92
NCLN-201ENST00000246117 TRAV10A0A0B4J240 114 aa9.27□□□□□ -0.93
NCLN-201ENST00000246117 LINC01547P58512 204 aaPredicted RBP9.27□□□□□ -0.93
NCLN-201ENST00000246117 PRLHP81277 87 aa9.26□□□□□ -0.93
NCLN-201ENST00000246117 VWFP04275 2813 aa9.26□□□□□ -0.93
NCLN-201ENST00000246117 H3BQ85 93 aa9.26□□□□□ -0.93
NCLN-201ENST00000246117 KIAA0087Q14695 138 aa9.25□□□□□ -0.93
NCLN-201ENST00000246117 ATP5EP2Q5VTU8 51 aa9.25□□□□□ -0.93
NCLN-201ENST00000246117 FBN1P35555 2871 aaKnown RBP9.25□□□□□ -0.93
NCLN-201ENST00000246117 C1orf137Q5JT78 98 aa9.23□□□□□ -0.93
NCLN-201ENST00000246117 BSNQ9UPA5 3926 aa9.23□□□□□ -0.93
NCLN-201ENST00000246117 TENM1Q9UKZ4 2725 aa9.22□□□□□ -0.93
NCLN-201ENST00000246117 C7orf33Q8WU49 177 aa9.22□□□□□ -0.93
NCLN-201ENST00000246117 FAM168BA1KXE4 195 aa9.21□□□□□ -0.93
NCLN-201ENST00000246117 A0A0G2JQZ4 141 aa9.21□□□□□ -0.93
NCLN-201ENST00000246117 A0A1W2PNN7 141 aa9.21□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 92.4 ms