RNA–Protein interactions for RNA: ENST00000243108.4

HOXC6-201, Transcript of homeobox C6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC6, Length 1,733 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-201ENST00000243108 UBE2WQ96B02 151 aa11.49□□□□□ -0.57
HOXC6-201ENST00000243108 LINC00158P58513 81 aa11.48□□□□□ -0.57
HOXC6-201ENST00000243108 CFAP161Q6P656 301 aa11.48□□□□□ -0.57
HOXC6-201ENST00000243108 C2orf82Q6UX34 121 aa11.48□□□□□ -0.57
HOXC6-201ENST00000243108 CKS1BP61024 79 aa11.47□□□□□ -0.57
HOXC6-201ENST00000243108 KRTAP26-1Q6PEX3 210 aa11.47□□□□□ -0.57
HOXC6-201ENST00000243108 H3BMG7 143 aa11.46□□□□□ -0.57
HOXC6-201ENST00000243108 H7C2G1 150 aa11.46□□□□□ -0.57
HOXC6-201ENST00000243108 TRBV20-1A0A075B6N2 111 aa11.46□□□□□ -0.58
HOXC6-201ENST00000243108 TRBV30A0A0K0K1B3 111 aa11.46□□□□□ -0.58
HOXC6-201ENST00000243108 A0A087WTM6 91 aa11.45□□□□□ -0.58
HOXC6-201ENST00000243108 PFN2P35080 140 aa11.45□□□□□ -0.58
HOXC6-201ENST00000243108 RPL13AP40429 203 aaKnown RBP11.45□□□□□ -0.58
HOXC6-201ENST00000243108 Q1RN00 199 aa11.45□□□□□ -0.58
HOXC6-201ENST00000243108 PSMB2P49721 201 aa11.44□□□□□ -0.58
HOXC6-201ENST00000243108 SPAG11BQ08648 103 aa11.44□□□□□ -0.58
HOXC6-201ENST00000243108 TCL1BO95988 128 aa11.43□□□□□ -0.58
HOXC6-201ENST00000243108 COX17Q14061 63 aa11.43□□□□□ -0.58
HOXC6-201ENST00000243108 F8W1H4 67 aa11.43□□□□□ -0.58
HOXC6-201ENST00000243108 TRIAP1O43715 76 aa11.43□□□□□ -0.58
HOXC6-201ENST00000243108 PRO0461Q9UI25 63 aa11.43□□□□□ -0.58
HOXC6-201ENST00000243108 SCGB1C2P0DMR2 95 aa11.42□□□□□ -0.58
HOXC6-201ENST00000243108 SND1-IT1Q9HBX3 110 aa11.42□□□□□ -0.58
HOXC6-201ENST00000243108 FAT1Q14517 4588 aa11.42□□□□□ -0.58
HOXC6-201ENST00000243108 LRCOL1A6NCL2 159 aa11.4□□□□□ -0.58
HOXC6-201ENST00000243108 IGKV2-28A0A075B6P5 120 aa11.39□□□□□ -0.59
HOXC6-201ENST00000243108 IGKV2D-28P01615 120 aa11.39□□□□□ -0.59
HOXC6-201ENST00000243108 TRAV13-2A0A0B4J235 113 aa11.38□□□□□ -0.59
HOXC6-201ENST00000243108 KRTAP10-1P60331 282 aa11.38□□□□□ -0.59
HOXC6-201ENST00000243108 C10orf25Q5T742 122 aa11.38□□□□□ -0.59
HOXC6-201ENST00000243108 NTN5Q8WTR8 489 aaPredicted RBP11.38□□□□□ -0.59
HOXC6-201ENST00000243108 C1orf43Q9BWL3 253 aa11.38□□□□□ -0.59
HOXC6-201ENST00000243108 Q9HAA7 133 aa11.38□□□□□ -0.59
HOXC6-201ENST00000243108 GVQW2A0A096LPI5 108 aaPredicted RBP11.38□□□□□ -0.59
HOXC6-201ENST00000243108 UNQ6190/PRO20217Q6UXQ8 127 aa11.38□□□□□ -0.59
HOXC6-201ENST00000243108 Q8N1X5 172 aa11.38□□□□□ -0.59
HOXC6-201ENST00000243108 COX6CP09669 75 aa11.37□□□□□ -0.59
HOXC6-201ENST00000243108 WFDC2Q14508 124 aa11.37□□□□□ -0.59
HOXC6-201ENST00000243108 DNAH8Q96JB1 4490 aa11.36□□□□□ -0.59
HOXC6-201ENST00000243108 C9orf116Q5BN46 136 aaPredicted RBP11.36□□□□□ -0.59
HOXC6-201ENST00000243108 LINC00337Q8N6G1 96 aa11.36□□□□□ -0.59
HOXC6-201ENST00000243108 LINC00526Q96FQ7 95 aa11.36□□□□□ -0.59
HOXC6-201ENST00000243108 XGP55808 180 aa11.35□□□□□ -0.59
HOXC6-201ENST00000243108 C15orf56Q8N910 161 aa11.35□□□□□ -0.59
HOXC6-201ENST00000243108 ATXN8Q156A1 80 aa11.35□□□□□ -0.59
HOXC6-201ENST00000243108 OCIAD2Q56VL3 154 aa11.35□□□□□ -0.59
HOXC6-201ENST00000243108 MTURNQ8N3F0 131 aa11.35□□□□□ -0.59
HOXC6-201ENST00000243108 IGKV2D-24A0A075B6R9 120 aa11.34□□□□□ -0.59
HOXC6-201ENST00000243108 SMCPP49901 116 aaPredicted RBP11.34□□□□□ -0.59
HOXC6-201ENST00000243108 PSCAO43653 123 aa11.33□□□□□ -0.6
HOXC6-201ENST00000243108 ZNF561-AS1K7EIQ3 104 aa11.32□□□□□ -0.6
HOXC6-201ENST00000243108 NDUFC2O95298 119 aa11.32□□□□□ -0.6
HOXC6-201ENST00000243108 C2orf48Q96LS8 159 aa11.32□□□□□ -0.6
HOXC6-201ENST00000243108 C6orf48Q9UBA6 75 aa11.32□□□□□ -0.6
HOXC6-201ENST00000243108 F8WDY8 70 aa11.31□□□□□ -0.6
HOXC6-201ENST00000243108 RPL28P46779 137 aaKnown RBP11.31□□□□□ -0.6
HOXC6-201ENST00000243108 LINC01620Q4KN68 170 aa11.31□□□□□ -0.6
HOXC6-201ENST00000243108 HIGD2BQ4VC39 106 aa11.31□□□□□ -0.6
HOXC6-201ENST00000243108 LST1O00453 97 aa11.3□□□□□ -0.6
HOXC6-201ENST00000243108 Q8N814 137 aa11.3□□□□□ -0.6
HOXC6-201ENST00000243108 M0QXV9 152 aa11.29□□□□□ -0.6
HOXC6-201ENST00000243108 CLEC2BQ92478 149 aa11.29□□□□□ -0.6
HOXC6-201ENST00000243108 VPS13BQ7Z7G8 4022 aa11.29□□□□□ -0.6
HOXC6-201ENST00000243108 K7ERU9 68 aa11.29□□□□□ -0.6
HOXC6-201ENST00000243108 LINC01600Q96MT4 127 aa11.29□□□□□ -0.6
HOXC6-201ENST00000243108 CAMK2N2Q96S95 79 aa11.29□□□□□ -0.6
HOXC6-201ENST00000243108 C9JAW5 83 aa11.28□□□□□ -0.6
HOXC6-201ENST00000243108 ETDBQ3ZM63 59 aa11.28□□□□□ -0.6
HOXC6-201ENST00000243108 IGLV5-52A0A0A0MRZ9 124 aa11.27□□□□□ -0.61
HOXC6-201ENST00000243108 LECT2O14960 151 aa11.26□□□□□ -0.61
HOXC6-201ENST00000243108 SLC25A20O43772 301 aa11.26□□□□□ -0.61
HOXC6-201ENST00000243108 HAMPP81172 84 aa11.26□□□□□ -0.61
HOXC6-201ENST00000243108 SMIM11BQ8TCY0 68 aa11.26□□□□□ -0.61
HOXC6-201ENST00000243108 RMI2Q96E14 147 aa11.26□□□□□ -0.61
HOXC6-201ENST00000243108 Q6ZRU5 148 aa11.26□□□□□ -0.61
HOXC6-201ENST00000243108 SRRM2Q9UQ35 2752 aaKnown RBP11.25□□□□□ -0.61
HOXC6-201ENST00000243108 Q8NDZ9 215 aa11.25□□□□□ -0.61
HOXC6-201ENST00000243108 TRBV10-2A0A0K0K1G8 114 aa11.24□□□□□ -0.61
HOXC6-201ENST00000243108 OR13C6PQ8NH95 151 aa11.23□□□□□ -0.61
HOXC6-201ENST00000243108 FAM30AQ9NZY2 134 aa11.23□□□□□ -0.61
HOXC6-201ENST00000243108 PRR3P79522 188 aaKnown RBP11.23□□□□□ -0.61
HOXC6-201ENST00000243108 TEN1Q86WV5 123 aa11.23□□□□□ -0.61
HOXC6-201ENST00000243108 ANKRD29Q8N6D5 301 aa11.22□□□□□ -0.61
HOXC6-201ENST00000243108 EPM2AB3EWF7 344 aa11.21□□□□□ -0.61
HOXC6-201ENST00000243108 TRACP01848 142 aa11.21□□□□□ -0.61
HOXC6-201ENST00000243108 SMR3BP02814 79 aaPredicted RBP11.21□□□□□ -0.61
HOXC6-201ENST00000243108 TMEM126AQ9H061 195 aa11.21□□□□□ -0.61
HOXC6-201ENST00000243108 H3BT86 120 aa11.21□□□□□ -0.62
HOXC6-201ENST00000243108 SYCNQ0VAF6 134 aa11.21□□□□□ -0.62
HOXC6-201ENST00000243108 USP17L23D6RBM5 183 aa11.2□□□□□ -0.62
HOXC6-201ENST00000243108 NDUFC2-KCTD14E9PQ53 114 aa11.2□□□□□ -0.62
HOXC6-201ENST00000243108 H0YGX0 51 aa11.2□□□□□ -0.62
HOXC6-201ENST00000243108 FAM218AQ96MZ4 157 aa11.2□□□□□ -0.62
HOXC6-201ENST00000243108 MYCBP2O75592 4640 aa11.2□□□□□ -0.62
HOXC6-201ENST00000243108 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.19□□□□□ -0.62
HOXC6-201ENST00000243108 Q5VSD8 79 aa11.19□□□□□ -0.62
HOXC6-201ENST00000243108 NCR3O14931 201 aa11.18□□□□□ -0.62
HOXC6-201ENST00000243108 RNF151Q2KHN1 245 aa11.18□□□□□ -0.62
HOXC6-201ENST00000243108 CARD19Q96LW7 228 aa11.18□□□□□ -0.62
HOXC6-201ENST00000243108 XAGE1AQ9HD64 81 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 184.7 ms