RNA–Protein interactions for RNA: ENST00000241704.7

COPA-201, Transcript of coatomer protein complex subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPA, Length 4,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-201ENST00000241704 CYSRT1A8MQ03 144 aa7.68□□□□□ -1.18
COPA-201ENST00000241704 LINC01547P58512 204 aaPredicted RBP7.68□□□□□ -1.18
COPA-201ENST00000241704 BPY2O14599 106 aa7.67□□□□□ -1.18
COPA-201ENST00000241704 TMEM254Q8TBM7 123 aa7.67□□□□□ -1.18
COPA-201ENST00000241704 FAM19A3Q7Z5A8 133 aa7.67□□□□□ -1.18
COPA-201ENST00000241704 ESRGQ1W209 222 aa7.67□□□□□ -1.18
COPA-201ENST00000241704 H7BZZ5 65 aa7.66□□□□□ -1.18
COPA-201ENST00000241704 PRYO14603 147 aa7.66□□□□□ -1.18
COPA-201ENST00000241704 WDFY4Q6ZS81 3184 aa7.66□□□□□ -1.18
COPA-201ENST00000241704 Q6ZVQ6 151 aa7.66□□□□□ -1.18
COPA-201ENST00000241704 WFDC10BQ8IUB3 73 aa7.66□□□□□ -1.18
COPA-201ENST00000241704 COX17Q14061 63 aa7.66□□□□□ -1.18
COPA-201ENST00000241704 A0A1B0GUV1 79 aa7.65□□□□□ -1.18
COPA-201ENST00000241704 M0R378 163 aa7.65□□□□□ -1.18
COPA-201ENST00000241704 LYPD5Q6UWN5 251 aa7.65□□□□□ -1.18
COPA-201ENST00000241704 OXTP01178 125 aa7.65□□□□□ -1.18
COPA-201ENST00000241704 MUC7Q8TAX7 377 aa7.65□□□□□ -1.18
COPA-201ENST00000241704 KLKP1Q107X0 134 aa7.65□□□□□ -1.19
COPA-201ENST00000241704 RPL37AP8A6NKH3 93 aa7.64□□□□□ -1.19
COPA-201ENST00000241704 ZNF706Q9Y5V0 76 aaPredicted RBP7.64□□□□□ -1.19
COPA-201ENST00000241704 UNQ6190/PRO20217Q6UXQ8 127 aa7.64□□□□□ -1.19
COPA-201ENST00000241704 CXCL6P80162 114 aa7.64□□□□□ -1.19
COPA-201ENST00000241704 XIRP2A4UGR9 3374 aa7.63□□□□□ -1.19
COPA-201ENST00000241704 PLAC8L1A1L4L8 177 aa7.63□□□□□ -1.19
COPA-201ENST00000241704 EGFEM1PQ0D2K5 195 aa7.63□□□□□ -1.19
COPA-201ENST00000241704 MDFIQ99750 246 aa7.63□□□□□ -1.19
COPA-201ENST00000241704 CELA1Q9UNI1 258 aa7.63□□□□□ -1.19
COPA-201ENST00000241704 Q6ZQY7 126 aa7.63□□□□□ -1.19
COPA-201ENST00000241704 C6orf223Q8N319 242 aa7.63□□□□□ -1.19
COPA-201ENST00000241704 STAB1Q9NY15 2570 aa7.62□□□□□ -1.19
COPA-201ENST00000241704 C9orf129Q5T035 196 aaKnown RBP7.6□□□□□ -1.19
COPA-201ENST00000241704 SPTSSBQ8NFR3 76 aa7.6□□□□□ -1.19
COPA-201ENST00000241704 SZT2Q5T011 3432 aa7.6□□□□□ -1.19
COPA-201ENST00000241704 MP68P56378 58 aa7.6□□□□□ -1.19
COPA-201ENST00000241704 SPINK6Q6UWN8 80 aa7.6□□□□□ -1.19
COPA-201ENST00000241704 DHRS4-AS1Q9P1J3 65 aa7.59□□□□□ -1.19
COPA-201ENST00000241704 CFAP54Q96N23 3096 aa7.59□□□□□ -1.19
COPA-201ENST00000241704 WWC2-AS2Q96NR7 200 aa7.59□□□□□ -1.2
COPA-201ENST00000241704 Q9UF83 564 aa7.59□□□□□ -1.2
COPA-201ENST00000241704 AKAP13Q12802 2813 aa7.58□□□□□ -1.2
COPA-201ENST00000241704 OBSCN-AS1Q96MR7 158 aa7.58□□□□□ -1.2
COPA-201ENST00000241704 X6R8D5 127 aa7.58□□□□□ -1.2
COPA-201ENST00000241704 C9orf116Q5BN46 136 aaPredicted RBP7.58□□□□□ -1.2
COPA-201ENST00000241704 TM2D3Q9BRN9 247 aa7.58□□□□□ -1.2
COPA-201ENST00000241704 PRR3P79522 188 aaKnown RBP7.57□□□□□ -1.2
COPA-201ENST00000241704 KRTAP1-3Q8IUG1 177 aa7.57□□□□□ -1.2
COPA-201ENST00000241704 IGLV9-49A0A0B4J1Y8 123 aa7.57□□□□□ -1.2
COPA-201ENST00000241704 A8MTW9 85 aa7.57□□□□□ -1.2
COPA-201ENST00000241704 ZNF73O43830 326 aaPredicted RBP7.57□□□□□ -1.2
COPA-201ENST00000241704 BAHCC1Q9P281 2608 aa7.57□□□□□ -1.2
COPA-201ENST00000241704 Q6ZQT0 140 aa7.57□□□□□ -1.2
COPA-201ENST00000241704 PSPHP1O15172 72 aa7.56□□□□□ -1.2
COPA-201ENST00000241704 LINC00575Q6W349 94 aa7.56□□□□□ -1.2
COPA-201ENST00000241704 DNAH14Q0VDD8 3507 aa7.56□□□□□ -1.2
COPA-201ENST00000241704 LOC110117498A0A087WWA1 95 aa7.55□□□□□ -1.2
COPA-201ENST00000241704 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.55□□□□□ -1.2
COPA-201ENST00000241704 SPATA3Q8NHX4 192 aa7.55□□□□□ -1.2
COPA-201ENST00000241704 LINC01556Q5JQF7 62 aa7.54□□□□□ -1.2
COPA-201ENST00000241704 DSPP15924 2871 aaKnown RBP7.54□□□□□ -1.2
COPA-201ENST00000241704 COL6A5A8TX70 2615 aa7.54□□□□□ -1.2
COPA-201ENST00000241704 IGHV3OR16-9A0A0B4J2B5 98 aa7.54□□□□□ -1.2
COPA-201ENST00000241704 VPS13AQ96RL7 3174 aa7.53□□□□□ -1.2
COPA-201ENST00000241704 CHKB-CPT1BH3BT56 60 aa7.53□□□□□ -1.2
COPA-201ENST00000241704 FAM30AQ9NZY2 134 aa7.53□□□□□ -1.2
COPA-201ENST00000241704 IGKV4-1P06312 121 aa7.53□□□□□ -1.2
COPA-201ENST00000241704 C1orf137Q5JT78 98 aa7.53□□□□□ -1.2
COPA-201ENST00000241704 ERC2-IT1O76042 136 aa7.52□□□□□ -1.2
COPA-201ENST00000241704 FP248Q71RG6 208 aaPredicted RBP7.52□□□□□ -1.21
COPA-201ENST00000241704 PRR4Q16378 134 aa7.52□□□□□ -1.21
COPA-201ENST00000241704 C22orf24Q9Y442 160 aa7.51□□□□□ -1.21
COPA-201ENST00000241704 C3orf84H3BNL1 204 aa7.51□□□□□ -1.21
COPA-201ENST00000241704 FAM104AQ969W3 186 aa7.51□□□□□ -1.21
COPA-201ENST00000241704 TEX15Q9BXT5 2789 aa7.51□□□□□ -1.21
COPA-201ENST00000241704 H3BNG1 76 aa7.5□□□□□ -1.21
COPA-201ENST00000241704 KRTAP1-1Q07627 177 aa7.5□□□□□ -1.21
COPA-201ENST00000241704 REG3GQ6UW15 175 aa7.5□□□□□ -1.21
COPA-201ENST00000241704 Q8NAQ8 132 aa7.5□□□□□ -1.21
COPA-201ENST00000241704 CSNK1G2-AS1Q8NCQ2 148 aa7.49□□□□□ -1.21
COPA-201ENST00000241704 CD164Q04900 197 aa7.49□□□□□ -1.21
COPA-201ENST00000241704 Q6ZRU5 148 aa7.49□□□□□ -1.21
COPA-201ENST00000241704 K7EIL1 84 aa7.48□□□□□ -1.21
COPA-201ENST00000241704 CIRBP-AS1Q8TBR5 109 aa7.48□□□□□ -1.21
COPA-201ENST00000241704 Q8N9L7 120 aa7.48□□□□□ -1.21
COPA-201ENST00000241704 NBDYA0A0U1RRE5 68 aa7.47□□□□□ -1.21
COPA-201ENST00000241704 A6NED7 52 aa7.47□□□□□ -1.21
COPA-201ENST00000241704 LINC00167Q96N53 147 aa7.47□□□□□ -1.21
COPA-201ENST00000241704 C19orf73Q9NVV2 129 aa7.47□□□□□ -1.21
COPA-201ENST00000241704 LAMA1P25391 3075 aa7.46□□□□□ -1.21
COPA-201ENST00000241704 C10orf25Q5T742 122 aa7.46□□□□□ -1.21
COPA-201ENST00000241704 UNC79Q9P2D8 2635 aa7.46□□□□□ -1.22
COPA-201ENST00000241704 PRR15Q8IV56 129 aa7.46□□□□□ -1.22
COPA-201ENST00000241704 KRTAP10-3P60369 221 aa7.46□□□□□ -1.22
COPA-201ENST00000241704 CHD6Q8TD26 2715 aa7.45□□□□□ -1.22
COPA-201ENST00000241704 C16orf90A8MZG2 172 aa7.45□□□□□ -1.22
COPA-201ENST00000241704 IGSF10Q6WRI0 2623 aa7.44□□□□□ -1.22
COPA-201ENST00000241704 GIG44P09565 113 aaPredicted RBP7.44□□□□□ -1.22
COPA-201ENST00000241704 CASC2Q6XLA1 102 aa7.44□□□□□ -1.22
COPA-201ENST00000241704 NBEAQ8NFP9 2946 aa7.44□□□□□ -1.22
COPA-201ENST00000241704 TRBV7-4A0A0J9YYF1 115 aa7.43□□□□□ -1.22
COPA-201ENST00000241704 PRR15LQ9BU68 103 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms