RNA–Protein interactions for RNA: ENST00000200181.7

ITGB4-201, Transcript of integrin subunit beta 4, humanhuman

TSL 1 (best) BASIC

Gene ITGB4, Length 5,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-201ENST00000200181 COL4A4P53420 1690 aaPredicted RBP11.79□□□□□ -0.52
ITGB4-201ENST00000200181 FAM19A4Q96LR4 140 aa11.78□□□□□ -0.52
ITGB4-201ENST00000200181 EPM2AB3EWF7 344 aa11.78□□□□□ -0.52
ITGB4-201ENST00000200181 ST20-AS1Q8NBB2 130 aa11.78□□□□□ -0.52
ITGB4-201ENST00000200181 LOC101927531A0A1B0GV80 90 aa11.77□□□□□ -0.53
ITGB4-201ENST00000200181 A8MUN3 132 aa11.77□□□□□ -0.53
ITGB4-201ENST00000200181 LINC01600Q96MT4 127 aa11.76□□□□□ -0.53
ITGB4-201ENST00000200181 TYMSOSQ8TAI1 123 aa11.75□□□□□ -0.53
ITGB4-201ENST00000200181 Q96NJ1 140 aa11.75□□□□□ -0.53
ITGB4-201ENST00000200181 CUL9Q8IWT3 2517 aa11.75□□□□□ -0.53
ITGB4-201ENST00000200181 CHTF8P0CG12 524 aa11.74□□□□□ -0.53
ITGB4-201ENST00000200181 COA5Q86WW8 74 aa11.73□□□□□ -0.53
ITGB4-201ENST00000200181 BDP1A6H8Y1 2624 aa11.73□□□□□ -0.53
ITGB4-201ENST00000200181 CEP192Q8TEP8 1941 aa11.73□□□□□ -0.53
ITGB4-201ENST00000200181 CACNA1AO00555 2505 aa11.73□□□□□ -0.53
ITGB4-201ENST00000200181 MUC4Q99102 2169 aa11.72□□□□□ -0.53
ITGB4-201ENST00000200181 CYP4F30PQ9H0H9 118 aa11.72□□□□□ -0.53
ITGB4-201ENST00000200181 TRBV7-4A0A0J9YYF1 115 aa11.71□□□□□ -0.53
ITGB4-201ENST00000200181 MUC22E2RYF6 1773 aaPredicted RBP11.71□□□□□ -0.54
ITGB4-201ENST00000200181 PRO3102Q9H379 93 aa11.7□□□□□ -0.54
ITGB4-201ENST00000200181 H3BNG1 76 aa11.7□□□□□ -0.54
ITGB4-201ENST00000200181 Q6ZRP5 223 aa11.7□□□□□ -0.54
ITGB4-201ENST00000200181 RTL8CO15255 209 aa11.7□□□□□ -0.54
ITGB4-201ENST00000200181 A8MWP4 228 aa11.7□□□□□ -0.54
ITGB4-201ENST00000200181 C16orf90A8MZG2 172 aa11.7□□□□□ -0.54
ITGB4-201ENST00000200181 COL5A1P20908 1838 aaPredicted RBP11.69□□□□□ -0.54
ITGB4-201ENST00000200181 UQCR11O14957 56 aa11.69□□□□□ -0.54
ITGB4-201ENST00000200181 FAM229AH3BQW9 127 aa11.68□□□□□ -0.54
ITGB4-201ENST00000200181 PTPRSQ13332 1948 aa11.67□□□□□ -0.54
ITGB4-201ENST00000200181 ERC2-IT1O76042 136 aa11.67□□□□□ -0.54
ITGB4-201ENST00000200181 MRPL34Q9BQ48 92 aaKnown RBP11.67□□□□□ -0.54
ITGB4-201ENST00000200181 K7EQZ3 153 aa11.66□□□□□ -0.54
ITGB4-201ENST00000200181 CRIPTQ9P021 101 aa11.66□□□□□ -0.54
ITGB4-201ENST00000200181 NAV2Q8IVL1 2488 aa11.66□□□□□ -0.54
ITGB4-201ENST00000200181 LRP4O75096 1905 aa11.65□□□□□ -0.54
ITGB4-201ENST00000200181 CPAMD8Q8IZJ3 1885 aa11.65□□□□□ -0.55
ITGB4-201ENST00000200181 APLNQ9ULZ1 77 aa11.65□□□□□ -0.55
ITGB4-201ENST00000200181 DOPEY1Q5JWR5 2465 aa11.64□□□□□ -0.55
ITGB4-201ENST00000200181 GVQW2A0A096LPI5 108 aaPredicted RBP11.62□□□□□ -0.55
ITGB4-201ENST00000200181 MIR22HGQ0VDD5 57 aa11.61□□□□□ -0.55
ITGB4-201ENST00000200181 NBDYA0A0U1RRE5 68 aa11.6□□□□□ -0.55
ITGB4-201ENST00000200181 ADAMTS20P59510 1910 aa11.59□□□□□ -0.55
ITGB4-201ENST00000200181 C10orf142B7Z368 130 aa11.59□□□□□ -0.55
ITGB4-201ENST00000200181 IGLV6-57P01721 117 aa11.59□□□□□ -0.55
ITGB4-201ENST00000200181 MYO18BQ8IUG5 2567 aa11.58□□□□□ -0.56
ITGB4-201ENST00000200181 LITAFQ99732 161 aa11.58□□□□□ -0.56
ITGB4-201ENST00000200181 CD164Q04900 197 aa11.56□□□□□ -0.56
ITGB4-201ENST00000200181 LINC00588Q9Y4M8 146 aa11.56□□□□□ -0.56
ITGB4-201ENST00000200181 FAM168BA1KXE4 195 aa11.55□□□□□ -0.56
ITGB4-201ENST00000200181 ABCA2Q9BZC7 2435 aa11.54□□□□□ -0.56
ITGB4-201ENST00000200181 LINC00336Q6ZUF6 198 aa11.54□□□□□ -0.56
ITGB4-201ENST00000200181 TET2Q6N021 2002 aaPredicted RBP11.54□□□□□ -0.56
ITGB4-201ENST00000200181 DSCR10P59022 87 aa11.52□□□□□ -0.57
ITGB4-201ENST00000200181 CCDC168Q8NDH2 2452 aa11.51□□□□□ -0.57
ITGB4-201ENST00000200181 C8orf17Q9NRJ1 99 aa11.5□□□□□ -0.57
ITGB4-201ENST00000200181 KTN1-AS1Q86SY8 53 aa11.5□□□□□ -0.57
ITGB4-201ENST00000200181 Q8NAQ8 132 aa11.5□□□□□ -0.57
ITGB4-201ENST00000200181 IGLV1-50A0A075B6I6 118 aa11.5□□□□□ -0.57
ITGB4-201ENST00000200181 IGFL1Q6UW32 110 aa11.48□□□□□ -0.57
ITGB4-201ENST00000200181 TTC28Q96AY4 2481 aa11.48□□□□□ -0.57
ITGB4-201ENST00000200181 COX6B2Q6YFQ2 88 aa11.47□□□□□ -0.57
ITGB4-201ENST00000200181 PRR15Q8IV56 129 aa11.47□□□□□ -0.57
ITGB4-201ENST00000200181 KLKP1Q107X0 134 aa11.47□□□□□ -0.57
ITGB4-201ENST00000200181 LCA10Q71F78 164 aa11.47□□□□□ -0.57
ITGB4-201ENST00000200181 KCNQ1DNQ9H478 68 aa11.46□□□□□ -0.58
ITGB4-201ENST00000200181 C9orf129Q5T035 196 aaKnown RBP11.44□□□□□ -0.58
ITGB4-201ENST00000200181 DNAH10OSP0CZ25 163 aa11.44□□□□□ -0.58
ITGB4-201ENST00000200181 LINC00528Q8N1L1 170 aa11.44□□□□□ -0.58
ITGB4-201ENST00000200181 A0A1B0GVX0 72 aa11.43□□□□□ -0.58
ITGB4-201ENST00000200181 OBSCN-AS1Q96MR7 158 aa11.41□□□□□ -0.58
ITGB4-201ENST00000200181 J3QL48 77 aa11.4□□□□□ -0.58
ITGB4-201ENST00000200181 H7BZZ5 65 aa11.39□□□□□ -0.59
ITGB4-201ENST00000200181 CDC42SE1Q9NRR8 79 aa11.38□□□□□ -0.59
ITGB4-201ENST00000200181 C9orf92A6NGG3 77 aa11.38□□□□□ -0.59
ITGB4-201ENST00000200181 LINC00304Q8N9R0 145 aa11.37□□□□□ -0.59
ITGB4-201ENST00000200181 KRTAP24-1Q3LI83 254 aa11.35□□□□□ -0.59
ITGB4-201ENST00000200181 PTPRBP23467 1997 aa11.35□□□□□ -0.59
ITGB4-201ENST00000200181 Q8N377 158 aa11.34□□□□□ -0.59
ITGB4-201ENST00000200181 A0A0G2JQZ4 141 aa11.33□□□□□ -0.6
ITGB4-201ENST00000200181 A0A1W2PNN7 141 aa11.33□□□□□ -0.6
ITGB4-201ENST00000200181 EIF4EBP3O60516 100 aaPredicted RBP11.32□□□□□ -0.6
ITGB4-201ENST00000200181 A0A0D9SG42 100 aa11.31□□□□□ -0.6
ITGB4-201ENST00000200181 MYO9AB2RTY4 2548 aa11.31□□□□□ -0.6
ITGB4-201ENST00000200181 ZNF861PO60384 105 aa11.3□□□□□ -0.6
ITGB4-201ENST00000200181 IGLV5-37A0A075B6J1 123 aa11.3□□□□□ -0.6
ITGB4-201ENST00000200181 LINC01554Q52M75 96 aa11.28□□□□□ -0.6
ITGB4-201ENST00000200181 FAM104AQ969W3 186 aa11.28□□□□□ -0.6
ITGB4-201ENST00000200181 C15orf56Q8N910 161 aa11.28□□□□□ -0.6
ITGB4-201ENST00000200181 WWC2-AS2Q96NR7 200 aa11.28□□□□□ -0.6
ITGB4-201ENST00000200181 COL27A1Q8IZC6 1860 aaPredicted RBP11.27□□□□□ -0.61
ITGB4-201ENST00000200181 LUZP6Q538Z0 58 aa11.26□□□□□ -0.61
ITGB4-201ENST00000200181 PIEZO2Q9H5I5 2752 aa11.25□□□□□ -0.61
ITGB4-201ENST00000200181 SPANXA2-OT1Q8N9U9 137 aa11.25□□□□□ -0.61
ITGB4-201ENST00000200181 RBM12B-AS1Q9P1G2 102 aa11.24□□□□□ -0.61
ITGB4-201ENST00000200181 KLK9Q2XQG4 91 aa11.24□□□□□ -0.61
ITGB4-201ENST00000200181 PRR34Q9NV39 138 aa11.22□□□□□ -0.61
ITGB4-201ENST00000200181 CSNK1G2-AS1Q8NCQ2 148 aa11.22□□□□□ -0.61
ITGB4-201ENST00000200181 PLA2G2DQ9UNK4 145 aa11.21□□□□□ -0.61
ITGB4-201ENST00000200181 Q8N1X5 172 aa11.2□□□□□ -0.62
ITGB4-201ENST00000200181 IGLV5-48A0A075B6I7 105 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms