RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-233ENST00000642021 A0A087WYN8 130 aa9.65□□□□□ -0.86
PHGDH-233ENST00000642021 PF4P02776 101 aa9.65□□□□□ -0.86
PHGDH-233ENST00000642021 C9orf129Q5T035 196 aaKnown RBP9.65□□□□□ -0.86
PHGDH-233ENST00000642021 PKIGQ9Y2B9 76 aa9.65□□□□□ -0.86
PHGDH-233ENST00000642021 ACYP1P07311 99 aa9.64□□□□□ -0.87
PHGDH-233ENST00000642021 DEFB130BP0DP73 79 aa9.64□□□□□ -0.87
PHGDH-233ENST00000642021 DEFB130AP0DP74 79 aa9.64□□□□□ -0.87
PHGDH-233ENST00000642021 C3orf22Q8N5N4 141 aa9.64□□□□□ -0.87
PHGDH-233ENST00000642021 A0A087WZ39 114 aa9.64□□□□□ -0.87
PHGDH-233ENST00000642021 CMC4P56277 68 aaPredicted RBP9.64□□□□□ -0.87
PHGDH-233ENST00000642021 FAM222AQ5U5X8 452 aa9.64□□□□□ -0.87
PHGDH-233ENST00000642021 GCN1Q92616 2671 aaKnown RBP9.64□□□□□ -0.87
PHGDH-233ENST00000642021 KRTAP1-1Q07627 177 aa9.63□□□□□ -0.87
PHGDH-233ENST00000642021 TENM4Q6N022 2769 aa9.63□□□□□ -0.87
PHGDH-233ENST00000642021 MALP21145 153 aa9.63□□□□□ -0.87
PHGDH-233ENST00000642021 PDZD2O15018 2839 aa9.63□□□□□ -0.87
PHGDH-233ENST00000642021 ATP5G1P05496 136 aa9.63□□□□□ -0.87
PHGDH-233ENST00000642021 C11orf68Q9H3H3 251 aaKnown RBP9.63□□□□□ -0.87
PHGDH-233ENST00000642021 LINC00959A0A1B0GUT2 108 aa9.62□□□□□ -0.87
PHGDH-233ENST00000642021 PRO0628Q9UI54 55 aa9.62□□□□□ -0.87
PHGDH-233ENST00000642021 SDIM1Q6ZPB5 146 aa9.62□□□□□ -0.87
PHGDH-233ENST00000642021 V9GYY9 64 aa9.62□□□□□ -0.87
PHGDH-233ENST00000642021 ITPR2Q14571 2701 aa9.61□□□□□ -0.87
PHGDH-233ENST00000642021 IBA57-AS1B1ANH7 110 aa9.61□□□□□ -0.87
PHGDH-233ENST00000642021 C16orf95Q9H693 158 aa9.61□□□□□ -0.87
PHGDH-233ENST00000642021 RNASE1P07998 156 aaKnown RBP9.6□□□□□ -0.87
PHGDH-233ENST00000642021 GAGE2AQ6NT46 116 aa9.6□□□□□ -0.87
PHGDH-233ENST00000642021 UQCRQO14949 82 aa9.6□□□□□ -0.87
PHGDH-233ENST00000642021 XCL1P47992 114 aa9.6□□□□□ -0.87
PHGDH-233ENST00000642021 Q5XG85 94 aa9.6□□□□□ -0.87
PHGDH-233ENST00000642021 LINC00643Q86TS7 51 aa9.6□□□□□ -0.87
PHGDH-233ENST00000642021 PAX4O43316 350 aa9.59□□□□□ -0.87
PHGDH-233ENST00000642021 CLPSL2Q6UWE3 100 aa9.59□□□□□ -0.87
PHGDH-233ENST00000642021 A0A096LPF7 62 aa9.59□□□□□ -0.87
PHGDH-233ENST00000642021 GYPEP15421 78 aa9.59□□□□□ -0.87
PHGDH-233ENST00000642021 C6orf226Q5I0X4 101 aa9.59□□□□□ -0.87
PHGDH-233ENST00000642021 LINC00526Q96FQ7 95 aa9.59□□□□□ -0.87
PHGDH-233ENST00000642021 VWFP04275 2813 aa9.58□□□□□ -0.88
PHGDH-233ENST00000642021 IMUPQ9GZP8 106 aa9.58□□□□□ -0.88
PHGDH-233ENST00000642021 LECT2O14960 151 aa9.57□□□□□ -0.88
PHGDH-233ENST00000642021 DNAL4O96015 105 aa9.57□□□□□ -0.88
PHGDH-233ENST00000642021 SLPIP03973 132 aa9.57□□□□□ -0.88
PHGDH-233ENST00000642021 INAFM2P0DMQ5 153 aa9.57□□□□□ -0.88
PHGDH-233ENST00000642021 C14orf132Q9NPU4 83 aa9.57□□□□□ -0.88
PHGDH-233ENST00000642021 OXTP01178 125 aa9.56□□□□□ -0.88
PHGDH-233ENST00000642021 PRR3P79522 188 aaKnown RBP9.56□□□□□ -0.88
PHGDH-233ENST00000642021 DPH3Q96FX2 82 aa9.56□□□□□ -0.88
PHGDH-233ENST00000642021 H0YGX0 51 aa9.55□□□□□ -0.88
PHGDH-233ENST00000642021 KRTAP10-3P60369 221 aa9.55□□□□□ -0.88
PHGDH-233ENST00000642021 LINC00612Q8N6U2 182 aa9.55□□□□□ -0.88
PHGDH-233ENST00000642021 X6R8D5 127 aa9.54□□□□□ -0.88
PHGDH-233ENST00000642021 Q8N3U1 123 aa9.53□□□□□ -0.88
PHGDH-233ENST00000642021 A0A1B0GUV1 79 aa9.53□□□□□ -0.88
PHGDH-233ENST00000642021 NCR3O14931 201 aa9.53□□□□□ -0.88
PHGDH-233ENST00000642021 SS18Q15532 418 aa9.53□□□□□ -0.88
PHGDH-233ENST00000642021 LINC00336Q6ZUF6 198 aa9.53□□□□□ -0.88
PHGDH-233ENST00000642021 OBSCN-AS1Q96MR7 158 aa9.53□□□□□ -0.88
PHGDH-233ENST00000642021 LY6G6DO95868 133 aa9.52□□□□□ -0.89
PHGDH-233ENST00000642021 SPATA3Q8NHX4 192 aa9.52□□□□□ -0.89
PHGDH-233ENST00000642021 NANOS2P60321 138 aaKnown RBP9.52□□□□□ -0.89
PHGDH-233ENST00000642021 Q8IZM0 81 aa9.52□□□□□ -0.89
PHGDH-233ENST00000642021 DSCR8Q96T75 97 aa9.52□□□□□ -0.89
PHGDH-233ENST00000642021 DEFB4AO15263 64 aa9.51□□□□□ -0.89
PHGDH-233ENST00000642021 LINC00269Q8N2A0 174 aa9.51□□□□□ -0.89
PHGDH-233ENST00000642021 LINC00846Q9NV44 126 aa9.51□□□□□ -0.89
PHGDH-233ENST00000642021 PRO0255Q9UI72 69 aa9.51□□□□□ -0.89
PHGDH-233ENST00000642021 HIVEP2P31629 2446 aa9.51□□□□□ -0.89
PHGDH-233ENST00000642021 FAM236DA0A1B0GTK5 79 aa9.5□□□□□ -0.89
PHGDH-233ENST00000642021 FAM236CP0DP71 79 aa9.5□□□□□ -0.89
PHGDH-233ENST00000642021 HILS1P60008 231 aa9.5□□□□□ -0.89
PHGDH-233ENST00000642021 KIAA0087Q14695 138 aa9.5□□□□□ -0.89
PHGDH-233ENST00000642021 LINC00482Q8N8I6 264 aa9.5□□□□□ -0.89
PHGDH-233ENST00000642021 IGLV10-54A0A075B6I4 117 aa9.5□□□□□ -0.89
PHGDH-233ENST00000642021 hADV29S1A0JD25 119 aa9.5□□□□□ -0.89
PHGDH-233ENST00000642021 SMR3AQ99954 134 aa9.5□□□□□ -0.89
PHGDH-233ENST00000642021 C9orf116Q5BN46 136 aaPredicted RBP9.49□□□□□ -0.89
PHGDH-233ENST00000642021 CXCL5P42830 114 aa9.49□□□□□ -0.89
PHGDH-233ENST00000642021 CRYGAP11844 174 aa9.48□□□□□ -0.89
PHGDH-233ENST00000642021 COX7CP15954 63 aa9.48□□□□□ -0.89
PHGDH-233ENST00000642021 IGKV3D-7A0A0C4DH55 119 aa9.47□□□□□ -0.89
PHGDH-233ENST00000642021 Q8NDZ9 215 aa9.47□□□□□ -0.89
PHGDH-233ENST00000642021 CYSTM1Q9H1C7 97 aa9.46□□□□□ -0.89
PHGDH-233ENST00000642021 ORMDL1Q9P0S3 153 aa9.46□□□□□ -0.89
PHGDH-233ENST00000642021 UNC79Q9P2D8 2635 aa9.46□□□□□ -0.89
PHGDH-233ENST00000642021 C1orf195Q5TG92 126 aa9.46□□□□□ -0.9
PHGDH-233ENST00000642021 CHCHD10Q8WYQ3 142 aaPredicted RBP9.46□□□□□ -0.9
PHGDH-233ENST00000642021 TMEM258P61165 79 aa9.46□□□□□ -0.9
PHGDH-233ENST00000642021 CD164L2Q6UWJ8 174 aa9.46□□□□□ -0.9
PHGDH-233ENST00000642021 LINC01561Q8N1V8 128 aa9.46□□□□□ -0.9
PHGDH-233ENST00000642021 ANGP03950 147 aaKnown RBP9.45□□□□□ -0.9
PHGDH-233ENST00000642021 DEFB135Q30KP9 77 aa9.45□□□□□ -0.9
PHGDH-233ENST00000642021 FASNP49327 2511 aaKnown RBP9.44□□□□□ -0.9
PHGDH-233ENST00000642021 HELZ2Q9BYK8 2649 aaKnown RBP9.44□□□□□ -0.9
PHGDH-233ENST00000642021 HIST1H4AP62805 103 aaKnown RBP9.44□□□□□ -0.9
PHGDH-233ENST00000642021 REG3AQ06141 175 aa9.44□□□□□ -0.9
PHGDH-233ENST00000642021 Q8N814 137 aa9.44□□□□□ -0.9
PHGDH-233ENST00000642021 TENM1Q9UKZ4 2725 aa9.43□□□□□ -0.9
PHGDH-233ENST00000642021 A0A087WVE0 104 aa9.43□□□□□ -0.9
PHGDH-233ENST00000642021 C2orf48Q96LS8 159 aa9.43□□□□□ -0.9
PHGDH-233ENST00000642021 LINC00167Q96N53 147 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 7 ms