RNA–Protein interactions for RNA: ENST00000639394.1

PAX6-256, Transcript of paired box 6, human

TSL 5

Gene PAX6, Length 1,988 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PAX6-256	ENST00000639394	UBR5	O95071	2799 aa	Predicted RBP	7.53	□□□□□ -1.2
PAX6-256	ENST00000639394	ABCA4	P78363	2273 aa		7.52	□□□□□ -1.21
PAX6-256	ENST00000639394	IGHV3-38	A0A0C4DH36	116 aa		7.52	□□□□□ -1.21
PAX6-256	ENST00000639394		K7EIM0	57 aa		7.52	□□□□□ -1.21
PAX6-256	ENST00000639394	PRB4	P10163	310 aa	Predicted RBP	7.52	□□□□□ -1.21
PAX6-256	ENST00000639394	MRGPRG-AS1	Q2M3A8	158 aa		7.52	□□□□□ -1.21
PAX6-256	ENST00000639394	NOTCH2NL	Q7Z3S9	236 aa		7.52	□□□□□ -1.21
PAX6-256	ENST00000639394	ZNRF1	Q8ND25	227 aa		7.52	□□□□□ -1.21
PAX6-256	ENST00000639394	SND1-IT1	Q9HBX3	110 aa		7.52	□□□□□ -1.21
PAX6-256	ENST00000639394		J3QKU1	62 aa		7.51	□□□□□ -1.21
PAX6-256	ENST00000639394	LY6G6D	O95868	133 aa		7.51	□□□□□ -1.21
PAX6-256	ENST00000639394	RNASE13	Q5GAN3	156 aa	Known RBP	7.51	□□□□□ -1.21
PAX6-256	ENST00000639394		Q6ZTI0	123 aa		7.51	□□□□□ -1.21
PAX6-256	ENST00000639394		Q8N814	137 aa		7.51	□□□□□ -1.21
PAX6-256	ENST00000639394	USP9X	Q93008	2570 aa	Predicted RBP	7.51	□□□□□ -1.21
PAX6-256	ENST00000639394	LYNX1	G3V0Z9	82 aa		7.51	□□□□□ -1.21
PAX6-256	ENST00000639394	LYNX1	P0DP58	116 aa		7.51	□□□□□ -1.21
PAX6-256	ENST00000639394	FAM208B	Q5VWN6	2430 aa		7.5	□□□□□ -1.21
PAX6-256	ENST00000639394	PRAC2	D3DTV9	90 aa		7.5	□□□□□ -1.21
PAX6-256	ENST00000639394		F5H697	171 aa		7.5	□□□□□ -1.21
PAX6-256	ENST00000639394	NTM-AS1	Q6ZSK4	140 aa		7.5	□□□□□ -1.21
PAX6-256	ENST00000639394	KLK9	Q9UKQ9	250 aa		7.5	□□□□□ -1.21
PAX6-256	ENST00000639394	HRNR	Q86YZ3	2850 aa	Predicted RBP	7.5	□□□□□ -1.21
PAX6-256	ENST00000639394	KAAG1	Q9UBP8	84 aa		7.5	□□□□□ -1.21
PAX6-256	ENST00000639394	FLNC	Q14315	2725 aa		7.49	□□□□□ -1.21
PAX6-256	ENST00000639394	IGKV2-28	A0A075B6P5	120 aa		7.49	□□□□□ -1.21
PAX6-256	ENST00000639394	IGKV2D-28	P01615	120 aa		7.49	□□□□□ -1.21
PAX6-256	ENST00000639394	SLPI	P03973	132 aa		7.49	□□□□□ -1.21
PAX6-256	ENST00000639394	LYPD2	Q6UXB3	125 aa		7.49	□□□□□ -1.21
PAX6-256	ENST00000639394	SPANXA2-OT1	Q8N9U9	137 aa		7.49	□□□□□ -1.21
PAX6-256	ENST00000639394	TNC	P24821	2201 aa		7.48	□□□□□ -1.21
PAX6-256	ENST00000639394	FAM30A	Q9NZY2	134 aa		7.48	□□□□□ -1.21
PAX6-256	ENST00000639394	CHD6	Q8TD26	2715 aa		7.48	□□□□□ -1.21
PAX6-256	ENST00000639394		M0QY20	66 aa		7.48	□□□□□ -1.21
PAX6-256	ENST00000639394	B9D2	Q9BPU9	175 aa		7.48	□□□□□ -1.21
PAX6-256	ENST00000639394	MYO18B	Q8IUG5	2567 aa		7.47	□□□□□ -1.21
PAX6-256	ENST00000639394	CCL19	Q99731	98 aa		7.47	□□□□□ -1.21
PAX6-256	ENST00000639394	RNF5	Q99942	180 aa		7.47	□□□□□ -1.21
PAX6-256	ENST00000639394	COL12A1	Q99715	3063 aa		7.47	□□□□□ -1.21
PAX6-256	ENST00000639394	PLXNB1	O43157	2135 aa		7.46	□□□□□ -1.21
PAX6-256	ENST00000639394	IGHV4-31	P0DP07	118 aa		7.46	□□□□□ -1.21
PAX6-256	ENST00000639394	RNASE3	P12724	160 aa	Known RBP	7.46	□□□□□ -1.21
PAX6-256	ENST00000639394	UNQ5830/PRO19650/PRO19816	Q6UY13	95 aa		7.46	□□□□□ -1.21
PAX6-256	ENST00000639394	LINC00208	Q96KT6	92 aa		7.46	□□□□□ -1.21
PAX6-256	ENST00000639394	IGHV3-49	A0A0A0MS15	119 aa		7.46	□□□□□ -1.22
PAX6-256	ENST00000639394		A0A1B0GW54	56 aa		7.46	□□□□□ -1.22
PAX6-256	ENST00000639394	FAM104A	Q969W3	186 aa		7.46	□□□□□ -1.22
PAX6-256	ENST00000639394	CDKN2A-AS1	Q9UH64	79 aa		7.46	□□□□□ -1.22
PAX6-256	ENST00000639394	IGKV2D-29	A0A075B6S2	120 aa	Predicted RBP	7.45	□□□□□ -1.22
PAX6-256	ENST00000639394	IGKV4-1	P06312	121 aa		7.45	□□□□□ -1.22
PAX6-256	ENST00000639394	RETNLB	Q9BQ08	111 aa		7.45	□□□□□ -1.22
PAX6-256	ENST00000639394	LRBA	P50851	2863 aa		7.45	□□□□□ -1.22
PAX6-256	ENST00000639394	SPTAN1	Q13813	2472 aa	Known RBP	7.44	□□□□□ -1.22
PAX6-256	ENST00000639394	ZFAND2A	Q8N6M9	145 aa		7.42	□□□□□ -1.22
PAX6-256	ENST00000639394	DCHS2	Q6V1P9	2916 aa		7.42	□□□□□ -1.22
PAX6-256	ENST00000639394	TRBV6-4	A0A1B0GX49	114 aa		7.42	□□□□□ -1.22
PAX6-256	ENST00000639394	CCL3L1	P16619	93 aa		7.42	□□□□□ -1.22
PAX6-256	ENST00000639394	NANOS2	P60321	138 aa	Known RBP	7.42	□□□□□ -1.22
PAX6-256	ENST00000639394		S4R3C0	116 aa		7.42	□□□□□ -1.22
PAX6-256	ENST00000639394	LRRK2	Q5S007	2527 aa		7.41	□□□□□ -1.22
PAX6-256	ENST00000639394	KRTAP10-9	P60411	292 aa		7.41	□□□□□ -1.22
PAX6-256	ENST00000639394	MALRD1	Q5VYJ5	2156 aa		7.41	□□□□□ -1.22
PAX6-256	ENST00000639394	SMIM1	B2RUZ4	78 aa		7.4	□□□□□ -1.22
PAX6-256	ENST00000639394	LINC01558	Q9Y6Z2	57 aa		7.4	□□□□□ -1.22
PAX6-256	ENST00000639394	IGHV3-73	A0A0B4J1V6	119 aa		7.4	□□□□□ -1.23
PAX6-256	ENST00000639394	ETDC	A0A1B0GVM5	59 aa		7.4	□□□□□ -1.23
PAX6-256	ENST00000639394	LMO4	P61968	165 aa		7.4	□□□□□ -1.23
PAX6-256	ENST00000639394	IGHV1-3	A0A0C4DH29	117 aa		7.39	□□□□□ -1.23
PAX6-256	ENST00000639394	PRR9	Q5T870	116 aa		7.39	□□□□□ -1.23
PAX6-256	ENST00000639394	MUC7	Q8TAX7	377 aa		7.39	□□□□□ -1.23
PAX6-256	ENST00000639394	PRAC1	Q96KF2	57 aa		7.39	□□□□□ -1.23
PAX6-256	ENST00000639394	UTP20	O75691	2785 aa	Known RBP	7.39	□□□□□ -1.23
PAX6-256	ENST00000639394	TENM4	Q6N022	2769 aa		7.39	□□□□□ -1.23
PAX6-256	ENST00000639394	CLPSL1	A2RUU4	121 aa		7.39	□□□□□ -1.23
PAX6-256	ENST00000639394	IGHV1-8	P0DP01	117 aa		7.39	□□□□□ -1.23
PAX6-256	ENST00000639394	AKAP6	Q13023	2319 aa		7.38	□□□□□ -1.23
PAX6-256	ENST00000639394	USP9Y	O00507	2555 aa	Predicted RBP	7.38	□□□□□ -1.23
PAX6-256	ENST00000639394	IGHV3-16	A0A0C4DH30	117 aa		7.38	□□□□□ -1.23
PAX6-256	ENST00000639394	ZFP36	P26651	326 aa	Known RBP	7.38	□□□□□ -1.23
PAX6-256	ENST00000639394	DSCR9	P59020	149 aa		7.38	□□□□□ -1.23
PAX6-256	ENST00000639394	LINC00476	Q8WZB0	136 aa		7.38	□□□□□ -1.23
PAX6-256	ENST00000639394	FBN2	P35556	2912 aa		7.38	□□□□□ -1.23
PAX6-256	ENST00000639394	IGLV11-55	A0A075B6I3	123 aa		7.37	□□□□□ -1.23
PAX6-256	ENST00000639394	TRGV2	A0A075B6R0	118 aa		7.37	□□□□□ -1.23
PAX6-256	ENST00000639394	IGHV4-30-2	A0A087WSY4	118 aa		7.37	□□□□□ -1.23
PAX6-256	ENST00000639394	IGHV4-61	A0A0C4DH41	118 aa		7.37	□□□□□ -1.23
PAX6-256	ENST00000639394		K7EQD1	137 aa		7.37	□□□□□ -1.23
PAX6-256	ENST00000639394	CCL18	P55774	89 aa		7.37	□□□□□ -1.23
PAX6-256	ENST00000639394	C19orf73	Q9NVV2	129 aa		7.37	□□□□□ -1.23
PAX6-256	ENST00000639394		H3BPC8	53 aa		7.37	□□□□□ -1.23
PAX6-256	ENST00000639394	NDUFA4	O00483	81 aa		7.37	□□□□□ -1.23
PAX6-256	ENST00000639394	FSHB	P01225	129 aa		7.37	□□□□□ -1.23
PAX6-256	ENST00000639394	IGHV3-53	P01767	116 aa		7.37	□□□□□ -1.23
PAX6-256	ENST00000639394	IGHV4-38-2	P0DP08	117 aa		7.37	□□□□□ -1.23
PAX6-256	ENST00000639394	DEFB113	Q30KQ7	82 aa		7.37	□□□□□ -1.23
PAX6-256	ENST00000639394	ZNRD1	Q9P1U0	126 aa		7.37	□□□□□ -1.23
PAX6-256	ENST00000639394	IGLV1-51	P01701	117 aa		7.36	□□□□□ -1.23
PAX6-256	ENST00000639394	MAP6D1	Q9H9H5	199 aa		7.36	□□□□□ -1.23
PAX6-256	ENST00000639394	PLAC8	Q9NZF1	115 aa		7.36	□□□□□ -1.23
PAX6-256	ENST00000639394	DOPEY2	Q9Y3R5	2298 aa		7.36	□□□□□ -1.23

Retrieved 100 of 20,778 RNA–protein pairs in 171.6 ms