RNA–Protein interactions for RNA: ENST00000637815.1

CTSD-212, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 2,003 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-212ENST00000637815 TRAV13-2A0A0B4J235 113 aa12.71□□□□□ -0.37
CTSD-212ENST00000637815 MRPL23Q16540 153 aaKnown RBP12.71□□□□□ -0.37
CTSD-212ENST00000637815 NTN5Q8WTR8 489 aaPredicted RBP12.71□□□□□ -0.37
CTSD-212ENST00000637815 C6orf226Q5I0X4 101 aa12.71□□□□□ -0.38
CTSD-212ENST00000637815 C2orf82Q6UX34 121 aa12.71□□□□□ -0.38
CTSD-212ENST00000637815 SND1-IT1Q9HBX3 110 aa12.71□□□□□ -0.38
CTSD-212ENST00000637815 CD164L2Q6UWJ8 174 aa12.7□□□□□ -0.38
CTSD-212ENST00000637815 IGKV2-28A0A075B6P5 120 aa12.69□□□□□ -0.38
CTSD-212ENST00000637815 IGKV2D-28P01615 120 aa12.69□□□□□ -0.38
CTSD-212ENST00000637815 CCL18P55774 89 aa12.69□□□□□ -0.38
CTSD-212ENST00000637815 Q8N3U1 123 aa12.69□□□□□ -0.38
CTSD-212ENST00000637815 CRPP02741 224 aa12.68□□□□□ -0.38
CTSD-212ENST00000637815 ANGP03950 147 aaKnown RBP12.68□□□□□ -0.38
CTSD-212ENST00000637815 REG3AQ06141 175 aa12.68□□□□□ -0.38
CTSD-212ENST00000637815 LINC00337Q8N6G1 96 aa12.68□□□□□ -0.38
CTSD-212ENST00000637815 CMYA5Q8N3K9 4069 aa12.68□□□□□ -0.38
CTSD-212ENST00000637815 SCGB1A1P11684 91 aa12.67□□□□□ -0.38
CTSD-212ENST00000637815 LELP1Q5T871 98 aa12.67□□□□□ -0.38
CTSD-212ENST00000637815 CHCHD10Q8WYQ3 142 aaPredicted RBP12.67□□□□□ -0.38
CTSD-212ENST00000637815 HTN3P15516 51 aa12.67□□□□□ -0.38
CTSD-212ENST00000637815 PFN2P35080 140 aa12.67□□□□□ -0.38
CTSD-212ENST00000637815 TEX49A0A1B0GTD5 131 aa12.66□□□□□ -0.38
CTSD-212ENST00000637815 RPL28P46779 137 aaKnown RBP12.66□□□□□ -0.38
CTSD-212ENST00000637815 OXLD1Q5BKU9 147 aa12.66□□□□□ -0.38
CTSD-212ENST00000637815 UBE2WQ96B02 151 aa12.66□□□□□ -0.38
CTSD-212ENST00000637815 C11orf68Q9H3H3 251 aaKnown RBP12.66□□□□□ -0.38
CTSD-212ENST00000637815 KRTAP10-11P60412 298 aa12.65□□□□□ -0.38
CTSD-212ENST00000637815 KIAA0087Q14695 138 aa12.65□□□□□ -0.38
CTSD-212ENST00000637815 KRTAP24-1Q3LI83 254 aa12.64□□□□□ -0.39
CTSD-212ENST00000637815 TRACP01848 142 aa12.63□□□□□ -0.39
CTSD-212ENST00000637815 CXCL5P42830 114 aa12.63□□□□□ -0.39
CTSD-212ENST00000637815 EGFEM1PQ0D2K5 195 aa12.63□□□□□ -0.39
CTSD-212ENST00000637815 IGLV10-54A0A075B6I4 117 aa12.62□□□□□ -0.39
CTSD-212ENST00000637815 CKS1BP61024 79 aa12.62□□□□□ -0.39
CTSD-212ENST00000637815 FLNBO75369 2602 aaKnown RBP12.61□□□□□ -0.39
CTSD-212ENST00000637815 ANK2Q01484 3957 aa12.61□□□□□ -0.39
CTSD-212ENST00000637815 DEFB121Q5J5C9 76 aa12.61□□□□□ -0.39
CTSD-212ENST00000637815 PRR34Q9NV39 138 aa12.61□□□□□ -0.39
CTSD-212ENST00000637815 XGP55808 180 aa12.6□□□□□ -0.39
CTSD-212ENST00000637815 FAM218AQ96MZ4 157 aa12.6□□□□□ -0.39
CTSD-212ENST00000637815 MALP21145 153 aa12.59□□□□□ -0.39
CTSD-212ENST00000637815 COX17Q14061 63 aa12.59□□□□□ -0.39
CTSD-212ENST00000637815 CFAP161Q6P656 301 aa12.59□□□□□ -0.39
CTSD-212ENST00000637815 SMIM11BQ8TCY0 68 aa12.59□□□□□ -0.39
CTSD-212ENST00000637815 PKD1L1Q8TDX9 2849 aa12.59□□□□□ -0.39
CTSD-212ENST00000637815 H3BNG1 76 aa12.58□□□□□ -0.4
CTSD-212ENST00000637815 LYPD5Q6UWN5 251 aa12.58□□□□□ -0.4
CTSD-212ENST00000637815 RETNQ9HD89 108 aa12.58□□□□□ -0.4
CTSD-212ENST00000637815 DNAH3Q8TD57 4116 aa12.58□□□□□ -0.4
CTSD-212ENST00000637815 FBN1P35555 2871 aaKnown RBP12.58□□□□□ -0.4
CTSD-212ENST00000637815 MT-ATP8P03928 68 aa12.57□□□□□ -0.4
CTSD-212ENST00000637815 STAB1Q9NY15 2570 aa12.57□□□□□ -0.4
CTSD-212ENST00000637815 KLK5Q9Y337 293 aaPredicted RBP12.56□□□□□ -0.4
CTSD-212ENST00000637815 TRAV8-4A0A0B4J246 113 aa12.55□□□□□ -0.4
CTSD-212ENST00000637815 C3orf56Q8N813 242 aa12.55□□□□□ -0.4
CTSD-212ENST00000637815 KLK12Q9UKR0 248 aa12.55□□□□□ -0.4
CTSD-212ENST00000637815 H0YGX0 51 aa12.54□□□□□ -0.4
CTSD-212ENST00000637815 ENHOQ6UWT2 76 aa12.54□□□□□ -0.4
CTSD-212ENST00000637815 NDUFC2O95298 119 aa12.53□□□□□ -0.4
CTSD-212ENST00000637815 BAALC-AS2P0C853 105 aa12.52□□□□□ -0.4
CTSD-212ENST00000637815 KPRPQ5T749 579 aaPredicted RBP12.52□□□□□ -0.4
CTSD-212ENST00000637815 FAM240AA0A1B0GVK7 77 aa12.52□□□□□ -0.41
CTSD-212ENST00000637815 Q6ZTC4 211 aa12.51□□□□□ -0.41
CTSD-212ENST00000637815 OR13C6PQ8NH95 151 aa12.51□□□□□ -0.41
CTSD-212ENST00000637815 C22orf24Q9Y442 160 aa12.51□□□□□ -0.41
CTSD-212ENST00000637815 SPAG11BQ08648 103 aa12.5□□□□□ -0.41
CTSD-212ENST00000637815 A0A087WYN8 130 aa12.5□□□□□ -0.41
CTSD-212ENST00000637815 C9orf116Q5BN46 136 aaPredicted RBP12.5□□□□□ -0.41
CTSD-212ENST00000637815 MUC7Q8TAX7 377 aa12.5□□□□□ -0.41
CTSD-212ENST00000637815 TENM3Q9P273 2699 aa12.5□□□□□ -0.41
CTSD-212ENST00000637815 A0A0J9YWU9 116 aa12.48□□□□□ -0.41
CTSD-212ENST00000637815 Q9HAA7 133 aa12.48□□□□□ -0.41
CTSD-212ENST00000637815 MAST4O15021 2626 aa12.48□□□□□ -0.41
CTSD-212ENST00000637815 C10orf25Q5T742 122 aa12.47□□□□□ -0.41
CTSD-212ENST00000637815 UNQ6190/PRO20217Q6UXQ8 127 aa12.47□□□□□ -0.41
CTSD-212ENST00000637815 WFDC10BQ8IUB3 73 aa12.47□□□□□ -0.41
CTSD-212ENST00000637815 C6orf223Q8N319 242 aa12.47□□□□□ -0.41
CTSD-212ENST00000637815 NANOS2P60321 138 aaKnown RBP12.47□□□□□ -0.41
CTSD-212ENST00000637815 DNAL4O96015 105 aa12.46□□□□□ -0.41
CTSD-212ENST00000637815 CYSRT1A8MQ03 144 aa12.45□□□□□ -0.42
CTSD-212ENST00000637815 PRR3P79522 188 aaKnown RBP12.45□□□□□ -0.42
CTSD-212ENST00000637815 GVQW2A0A096LPI5 108 aaPredicted RBP12.44□□□□□ -0.42
CTSD-212ENST00000637815 LINC00526Q96FQ7 95 aa12.44□□□□□ -0.42
CTSD-212ENST00000637815 TMEM126AQ9H061 195 aa12.44□□□□□ -0.42
CTSD-212ENST00000637815 Q8NDZ9 215 aa12.43□□□□□ -0.42
CTSD-212ENST00000637815 LECT2O14960 151 aa12.42□□□□□ -0.42
CTSD-212ENST00000637815 SNCGO76070 127 aa12.42□□□□□ -0.42
CTSD-212ENST00000637815 ACYP1P07311 99 aa12.42□□□□□ -0.42
CTSD-212ENST00000637815 ESRGQ1W209 222 aa12.42□□□□□ -0.42
CTSD-212ENST00000637815 KRTAP26-1Q6PEX3 210 aa12.42□□□□□ -0.42
CTSD-212ENST00000637815 C15orf53Q8NAA6 179 aa12.41□□□□□ -0.42
CTSD-212ENST00000637815 INAFM2P0DMQ5 153 aa12.4□□□□□ -0.42
CTSD-212ENST00000637815 C11orf45Q8TAV5 145 aa12.4□□□□□ -0.42
CTSD-212ENST00000637815 DEFB131BA0A096LNP1 70 aa12.4□□□□□ -0.42
CTSD-212ENST00000637815 BAHCC1Q9P281 2608 aa12.39□□□□□ -0.43
CTSD-212ENST00000637815 A0A1B0GX51 115 aa12.39□□□□□ -0.43
CTSD-212ENST00000637815 NCR3O14931 201 aa12.38□□□□□ -0.43
CTSD-212ENST00000637815 LINC00167Q96N53 147 aa12.38□□□□□ -0.43
CTSD-212ENST00000637815 C6orf48Q9UBA6 75 aa12.38□□□□□ -0.43
CTSD-212ENST00000637815 NOTCH1P46531 2555 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms