RNA–Protein interactions for RNA: ENST00000637769.1

CACNA1A-247, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-247ENST00000637769 BPTFQ12830 3046 aa13.16□□□□□ -0.3
CACNA1A-247ENST00000637769 PRRC2CQ9Y520 2896 aaKnown RBP13.16□□□□□ -0.3
CACNA1A-247ENST00000637769 A0A1B0GW54 56 aa13.14□□□□□ -0.31
CACNA1A-247ENST00000637769 LINC01561Q8N1V8 128 aa13.14□□□□□ -0.31
CACNA1A-247ENST00000637769 PSPHP1O15172 72 aa13.14□□□□□ -0.31
CACNA1A-247ENST00000637769 Q6ZSV7 163 aa13.14□□□□□ -0.31
CACNA1A-247ENST00000637769 LY6G6CO95867 125 aa13.13□□□□□ -0.31
CACNA1A-247ENST00000637769 IGLV2-18A0A075B6J9 118 aa13.13□□□□□ -0.31
CACNA1A-247ENST00000637769 A8MZ25 164 aa13.13□□□□□ -0.31
CACNA1A-247ENST00000637769 LINC00575Q6W349 94 aa13.13□□□□□ -0.31
CACNA1A-247ENST00000637769 Q8NA96 180 aa13.12□□□□□ -0.31
CACNA1A-247ENST00000637769 IGIPA6NJ69 53 aa13.12□□□□□ -0.31
CACNA1A-247ENST00000637769 INAFM1C9JVW0 142 aa13.12□□□□□ -0.31
CACNA1A-247ENST00000637769 Q9BRP9 147 aa13.12□□□□□ -0.31
CACNA1A-247ENST00000637769 IGLV5-52A0A0A0MRZ9 124 aa13.11□□□□□ -0.31
CACNA1A-247ENST00000637769 TRBV10-3A0A0K0K1G6 114 aa13.11□□□□□ -0.31
CACNA1A-247ENST00000637769 TMEM254Q8TBM7 123 aa13.11□□□□□ -0.31
CACNA1A-247ENST00000637769 SOSTDC1Q6X4U4 206 aa13.1□□□□□ -0.31
CACNA1A-247ENST00000637769 MUC22E2RYF6 1773 aaPredicted RBP13.1□□□□□ -0.31
CACNA1A-247ENST00000637769 SPAG11AQ6PDA7 123 aa13.1□□□□□ -0.31
CACNA1A-247ENST00000637769 A0A1B0GUV1 79 aa13.1□□□□□ -0.31
CACNA1A-247ENST00000637769 PLA2G2AP14555 144 aa13.1□□□□□ -0.31
CACNA1A-247ENST00000637769 POM121L12Q8N7R1 296 aa13.1□□□□□ -0.31
CACNA1A-247ENST00000637769 PROK1P58294 105 aa13.1□□□□□ -0.31
CACNA1A-247ENST00000637769 C2orf48Q96LS8 159 aa13.1□□□□□ -0.31
CACNA1A-247ENST00000637769 PRO0628Q9UI54 55 aa13.09□□□□□ -0.31
CACNA1A-247ENST00000637769 Q6ZS46 218 aa13.09□□□□□ -0.31
CACNA1A-247ENST00000637769 LINC00482Q8N8I6 264 aa13.09□□□□□ -0.31
CACNA1A-247ENST00000637769 ZNF702PQ9H963 129 aa13.09□□□□□ -0.31
CACNA1A-247ENST00000637769 Q8N2B8 174 aa13.08□□□□□ -0.31
CACNA1A-247ENST00000637769 IGLV1-40P01703 118 aa13.08□□□□□ -0.32
CACNA1A-247ENST00000637769 ACYP2P14621 99 aa13.07□□□□□ -0.32
CACNA1A-247ENST00000637769 COL4A3Q01955 1670 aa13.07□□□□□ -0.32
CACNA1A-247ENST00000637769 CRYGAP11844 174 aa13.06□□□□□ -0.32
CACNA1A-247ENST00000637769 SMIM1B2RUZ4 78 aa13.06□□□□□ -0.32
CACNA1A-247ENST00000637769 M0R2N4 97 aa13.06□□□□□ -0.32
CACNA1A-247ENST00000637769 LINC00242Q5T6M2 205 aa13.06□□□□□ -0.32
CACNA1A-247ENST00000637769 BRWD1-AS2P59051 145 aa13.05□□□□□ -0.32
CACNA1A-247ENST00000637769 ZNF295-AS1Q8N0V1 137 aa13.05□□□□□ -0.32
CACNA1A-247ENST00000637769 A0A1B0GU69 56 aa13.05□□□□□ -0.32
CACNA1A-247ENST00000637769 MSMPQ1L6U9 139 aa13.04□□□□□ -0.32
CACNA1A-247ENST00000637769 Q8N6K4 173 aa13.04□□□□□ -0.32
CACNA1A-247ENST00000637769 C11orf71Q6IPW1 123 aa13.04□□□□□ -0.32
CACNA1A-247ENST00000637769 UNQ6190/PRO20217Q6UXQ8 127 aa13.02□□□□□ -0.33
CACNA1A-247ENST00000637769 C7orf65Q6ZTY9 151 aa13.02□□□□□ -0.33
CACNA1A-247ENST00000637769 CEP295Q9C0D2 2601 aa13.02□□□□□ -0.33
CACNA1A-247ENST00000637769 LINC01006Q8NI28 216 aa13.01□□□□□ -0.33
CACNA1A-247ENST00000637769 OXLD1Q5BKU9 147 aa13.01□□□□□ -0.33
CACNA1A-247ENST00000637769 C1orf64Q8NEQ6 169 aa13.01□□□□□ -0.33
CACNA1A-247ENST00000637769 BCE1O60756 84 aa13.01□□□□□ -0.33
CACNA1A-247ENST00000637769 A0A087WYN8 130 aa13□□□□□ -0.33
CACNA1A-247ENST00000637769 C6orf223Q8N319 242 aa13□□□□□ -0.33
CACNA1A-247ENST00000637769 CR1P17927 2039 aa13□□□□□ -0.33
CACNA1A-247ENST00000637769 Q6ZTC4 211 aa13□□□□□ -0.33
CACNA1A-247ENST00000637769 BEAN1Q3B7T3 259 aa12.99□□□□□ -0.33
CACNA1A-247ENST00000637769 SBSPONQ8IVN8 264 aa12.99□□□□□ -0.33
CACNA1A-247ENST00000637769 H3BPC8 53 aa12.99□□□□□ -0.33
CACNA1A-247ENST00000637769 SPINK1P00995 79 aa12.99□□□□□ -0.33
CACNA1A-247ENST00000637769 AMELXQ99217 191 aa12.99□□□□□ -0.33
CACNA1A-247ENST00000637769 LINC00337Q8N6G1 96 aa12.98□□□□□ -0.33
CACNA1A-247ENST00000637769 LINC01556Q5JQF7 62 aa12.98□□□□□ -0.33
CACNA1A-247ENST00000637769 LY6G6DO95868 133 aa12.97□□□□□ -0.33
CACNA1A-247ENST00000637769 A0A087WSZ3 146 aa12.97□□□□□ -0.33
CACNA1A-247ENST00000637769 PCOTHQ58A44 107 aa12.97□□□□□ -0.33
CACNA1A-247ENST00000637769 C8orf87E5RJ46 101 aa12.96□□□□□ -0.33
CACNA1A-247ENST00000637769 PRR9Q5T870 116 aa12.96□□□□□ -0.34
CACNA1A-247ENST00000637769 ZNF580Q9UK33 172 aa12.95□□□□□ -0.34
CACNA1A-247ENST00000637769 BRI3O95415 125 aa12.94□□□□□ -0.34
CACNA1A-247ENST00000637769 RPS28P62857 69 aaKnown RBP12.94□□□□□ -0.34
CACNA1A-247ENST00000637769 COX8CQ7Z4L0 72 aa12.91□□□□□ -0.34
CACNA1A-247ENST00000637769 C9orf116Q5BN46 136 aaPredicted RBP12.91□□□□□ -0.34
CACNA1A-247ENST00000637769 Q6ZPA2 131 aa12.9□□□□□ -0.34
CACNA1A-247ENST00000637769 IGKV2D-30A0A075B6S6 120 aa12.9□□□□□ -0.34
CACNA1A-247ENST00000637769 IGKV2-30P06310 120 aa12.9□□□□□ -0.34
CACNA1A-247ENST00000637769 PLA2G5P39877 138 aa12.9□□□□□ -0.34
CACNA1A-247ENST00000637769 PLA2G1BP04054 148 aaKnown RBP12.9□□□□□ -0.34
CACNA1A-247ENST00000637769 NHLRC4P0CG21 123 aaPredicted RBP12.9□□□□□ -0.34
CACNA1A-247ENST00000637769 C6orf48Q9UBA6 75 aa12.9□□□□□ -0.34
CACNA1A-247ENST00000637769 IGLV1-51P01701 117 aa12.89□□□□□ -0.35
CACNA1A-247ENST00000637769 A0A087WVE0 104 aa12.89□□□□□ -0.35
CACNA1A-247ENST00000637769 C11orf21Q9P2W6 132 aa12.89□□□□□ -0.35
CACNA1A-247ENST00000637769 PRLHP81277 87 aa12.89□□□□□ -0.35
CACNA1A-247ENST00000637769 COX6A2Q02221 97 aa12.89□□□□□ -0.35
CACNA1A-247ENST00000637769 A0A1W2PNU3 283 aaPredicted RBP12.88□□□□□ -0.35
CACNA1A-247ENST00000637769 SPINT4Q6UDR6 99 aa12.88□□□□□ -0.35
CACNA1A-247ENST00000637769 C1orf229Q6ZS94 237 aaPredicted RBP12.88□□□□□ -0.35
CACNA1A-247ENST00000637769 C1orf134Q5TEV5 83 aa12.88□□□□□ -0.35
CACNA1A-247ENST00000637769 C19orf84I3L1E1 186 aa12.86□□□□□ -0.35
CACNA1A-247ENST00000637769 FHL2Q14192 279 aa12.85□□□□□ -0.35
CACNA1A-247ENST00000637769 ADAMTSL4-AS1Q5T5F5 129 aa12.85□□□□□ -0.35
CACNA1A-247ENST00000637769 PRR3P79522 188 aaKnown RBP12.85□□□□□ -0.35
CACNA1A-247ENST00000637769 RETNLBQ9BQ08 111 aa12.85□□□□□ -0.35
CACNA1A-247ENST00000637769 CRIP2P52943 208 aaPredicted RBP12.84□□□□□ -0.35
CACNA1A-247ENST00000637769 C10orf99Q6UWK7 81 aa12.84□□□□□ -0.35
CACNA1A-247ENST00000637769 LINC00846Q9NV44 126 aa12.82□□□□□ -0.36
CACNA1A-247ENST00000637769 TRAV22A0A0B4J277 110 aa12.82□□□□□ -0.36
CACNA1A-247ENST00000637769 EPG5Q9HCE0 2579 aa12.81□□□□□ -0.36
CACNA1A-247ENST00000637769 ODF3L2Q3SX64 289 aa12.81□□□□□ -0.36
CACNA1A-247ENST00000637769 CRIP3Q6Q6R5 217 aa12.8□□□□□ -0.36
CACNA1A-247ENST00000637769 ATP11AUNQ6ZP68 121 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms