RNA–Protein interactions for RNA: ENST00000637329.1

CLN6-219, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,204 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-219ENST00000637329 BVES-AS1Q5T3Y7 98 aa10.25□□□□□ -0.77
CLN6-219ENST00000637329 Q6ZVH6 145 aa10.25□□□□□ -0.77
CLN6-219ENST00000637329 SNHG12Q9BXW3 62 aa10.25□□□□□ -0.77
CLN6-219ENST00000637329 Q9HAA7 133 aa10.25□□□□□ -0.77
CLN6-219ENST00000637329 EREGO14944 169 aa10.24□□□□□ -0.77
CLN6-219ENST00000637329 HINT1P49773 126 aaPredicted RBP10.24□□□□□ -0.77
CLN6-219ENST00000637329 SPAG11BQ08648 103 aa10.24□□□□□ -0.77
CLN6-219ENST00000637329 CIRBPQ14011 172 aaKnown RBP10.24□□□□□ -0.77
CLN6-219ENST00000637329 KIAA0087Q14695 138 aa10.24□□□□□ -0.77
CLN6-219ENST00000637329 LITAFQ99732 161 aa10.24□□□□□ -0.77
CLN6-219ENST00000637329 SPANXDQ9BXN6 97 aa10.24□□□□□ -0.77
CLN6-219ENST00000637329 SPANXCQ9NY87 97 aa10.24□□□□□ -0.77
CLN6-219ENST00000637329 CEND1Q8N111 149 aa10.23□□□□□ -0.77
CLN6-219ENST00000637329 TM2D2Q9BX73 214 aa10.23□□□□□ -0.77
CLN6-219ENST00000637329 CKS1BP61024 79 aa10.22□□□□□ -0.77
CLN6-219ENST00000637329 SRSF9Q13242 221 aaKnown RBP eCLIP10.22□□□□□ -0.77
CLN6-219ENST00000637329 F8WDY8 70 aa10.21□□□□□ -0.77
CLN6-219ENST00000637329 GCSHP23434 173 aa10.21□□□□□ -0.77
CLN6-219ENST00000637329 MEIG1Q5JSS6 88 aa10.21□□□□□ -0.77
CLN6-219ENST00000637329 KRTAP1-5Q9BYS1 174 aa10.21□□□□□ -0.77
CLN6-219ENST00000637329 PPDPFQ9H3Y8 114 aa10.21□□□□□ -0.77
CLN6-219ENST00000637329 GVQW2A0A096LPI5 108 aaPredicted RBP10.2□□□□□ -0.78
CLN6-219ENST00000637329 NBDYA0A0U1RRE5 68 aa10.2□□□□□ -0.78
CLN6-219ENST00000637329 TMEM238LA0A1B0GVL6 79 aa10.2□□□□□ -0.78
CLN6-219ENST00000637329 A6NJY4 79 aa10.2□□□□□ -0.78
CLN6-219ENST00000637329 BATFQ16520 125 aa10.2□□□□□ -0.78
CLN6-219ENST00000637329 C15orf56Q8N910 161 aa10.2□□□□□ -0.78
CLN6-219ENST00000637329 COPS9Q8WXC6 57 aa10.2□□□□□ -0.78
CLN6-219ENST00000637329 A6NDN8 102 aa10.19□□□□□ -0.78
CLN6-219ENST00000637329 IFITM1P13164 125 aa10.19□□□□□ -0.78
CLN6-219ENST00000637329 COL5A1-AS1Q5SY13 56 aa10.19□□□□□ -0.78
CLN6-219ENST00000637329 ZNF561-AS1K7EIQ3 104 aa10.18□□□□□ -0.78
CLN6-219ENST00000637329 PTTG1IPP53801 180 aa10.18□□□□□ -0.78
CLN6-219ENST00000637329 COX17Q14061 63 aa10.18□□□□□ -0.78
CLN6-219ENST00000637329 NTN5Q8WTR8 489 aaPredicted RBP10.18□□□□□ -0.78
CLN6-219ENST00000637329 C2orf48Q96LS8 159 aa10.18□□□□□ -0.78
CLN6-219ENST00000637329 ERG28Q9UKR5 140 aa10.18□□□□□ -0.78
CLN6-219ENST00000637329 FXYD2P54710 66 aa10.17□□□□□ -0.78
CLN6-219ENST00000637329 VPS13DQ5THJ4 4388 aa10.16□□□□□ -0.78
CLN6-219ENST00000637329 SMIM13P0DJ93 91 aa10.16□□□□□ -0.78
CLN6-219ENST00000637329 RPL24P83731 157 aaKnown RBP10.16□□□□□ -0.78
CLN6-219ENST00000637329 ADAMTSL4-AS1Q5T5F5 129 aa10.16□□□□□ -0.78
CLN6-219ENST00000637329 C2orf82Q6UX34 121 aa10.16□□□□□ -0.78
CLN6-219ENST00000637329 HYDINQ4G0P3 5121 aa10.16□□□□□ -0.78
CLN6-219ENST00000637329 TRBV30A0A0K0K1B3 111 aa10.15□□□□□ -0.78
CLN6-219ENST00000637329 A0A1B0GWB2 263 aa10.14□□□□□ -0.79
CLN6-219ENST00000637329 USP17L23D6RBM5 183 aa10.13□□□□□ -0.79
CLN6-219ENST00000637329 HIGD2BQ4VC39 106 aa10.13□□□□□ -0.79
CLN6-219ENST00000637329 C6orf223Q8N319 242 aa10.13□□□□□ -0.79
CLN6-219ENST00000637329 CAMK2N2Q96S95 79 aa10.13□□□□□ -0.79
CLN6-219ENST00000637329 ALMS1Q8TCU4 4167 aa10.12□□□□□ -0.79
CLN6-219ENST00000637329 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.12□□□□□ -0.79
CLN6-219ENST00000637329 PSCAO43653 123 aa10.12□□□□□ -0.79
CLN6-219ENST00000637329 LINC00158P58513 81 aa10.12□□□□□ -0.79
CLN6-219ENST00000637329 MUSTN1Q8IVN3 82 aa10.12□□□□□ -0.79
CLN6-219ENST00000637329 MIR7-3HGQ8N6C7 128 aa10.12□□□□□ -0.79
CLN6-219ENST00000637329 LINC00308Q8TCZ7 52 aa10.12□□□□□ -0.79
CLN6-219ENST00000637329 LINC00476Q8WZB0 136 aa10.12□□□□□ -0.79
CLN6-219ENST00000637329 UNQ6190/PRO20217Q6UXQ8 127 aa10.11□□□□□ -0.79
CLN6-219ENST00000637329 DAND5Q8N907 189 aa10.11□□□□□ -0.79
CLN6-219ENST00000637329 NHP2Q9NX24 153 aaKnown RBP10.11□□□□□ -0.79
CLN6-219ENST00000637329 A0A0U1RRA0 63 aa10.1□□□□□ -0.79
CLN6-219ENST00000637329 PFN2P35080 140 aa10.1□□□□□ -0.79
CLN6-219ENST00000637329 C14orf177Q52M58 125 aa10.1□□□□□ -0.79
CLN6-219ENST00000637329 C10orf25Q5T742 122 aa10.1□□□□□ -0.79
CLN6-219ENST00000637329 Q6ZR54 194 aa10.1□□□□□ -0.79
CLN6-219ENST00000637329 C6orf48Q9UBA6 75 aa10.1□□□□□ -0.79
CLN6-219ENST00000637329 PCLOQ9Y6V0 5065 aa10.1□□□□□ -0.79
CLN6-219ENST00000637329 A0A0B4J2C4 111 aa10.09□□□□□ -0.79
CLN6-219ENST00000637329 LOC107984156A0A0G2JMH3 177 aa10.09□□□□□ -0.79
CLN6-219ENST00000637329 A4D1N5 150 aa10.09□□□□□ -0.79
CLN6-219ENST00000637329 RNF151Q2KHN1 245 aa10.09□□□□□ -0.79
CLN6-219ENST00000637329 Q6ZRN7 208 aaPredicted RBP10.09□□□□□ -0.79
CLN6-219ENST00000637329 ARL17AQ8IVW1 177 aa10.09□□□□□ -0.79
CLN6-219ENST00000637329 LINC00526Q96FQ7 95 aa10.09□□□□□ -0.79
CLN6-219ENST00000637329 DNAH6Q9C0G6 4158 aa10.09□□□□□ -0.79
CLN6-219ENST00000637329 SYCNQ0VAF6 134 aa10.08□□□□□ -0.8
CLN6-219ENST00000637329 Q6ZRU5 148 aa10.08□□□□□ -0.8
CLN6-219ENST00000637329 CARD19Q96LW7 228 aa10.08□□□□□ -0.8
CLN6-219ENST00000637329 NPC2P61916 151 aa10.07□□□□□ -0.8
CLN6-219ENST00000637329 SOSTDC1Q6X4U4 206 aa10.07□□□□□ -0.8
CLN6-219ENST00000637329 RYR1P21817 5038 aa10.07□□□□□ -0.8
CLN6-219ENST00000637329 HERC2O95714 4834 aa10.07□□□□□ -0.8
CLN6-219ENST00000637329 TAX1BP3O14907 124 aa10.06□□□□□ -0.8
CLN6-219ENST00000637329 LY6G6CO95867 125 aa10.06□□□□□ -0.8
CLN6-219ENST00000637329 K7ERJ3 54 aa10.05□□□□□ -0.8
CLN6-219ENST00000637329 CFC1BP0CG36 223 aa10.05□□□□□ -0.8
CLN6-219ENST00000637329 CFC1P0CG37 223 aa10.05□□□□□ -0.8
CLN6-219ENST00000637329 C9orf116Q5BN46 136 aaPredicted RBP10.05□□□□□ -0.8
CLN6-219ENST00000637329 NDUFC2-KCTD14E9PQ53 114 aa10.04□□□□□ -0.8
CLN6-219ENST00000637329 EIF4EBP3O60516 100 aaPredicted RBP10.04□□□□□ -0.8
CLN6-219ENST00000637329 TLX1NBP0CAT3 122 aa10.04□□□□□ -0.8
CLN6-219ENST00000637329 CNBPP62633 177 aaKnown RBP10.04□□□□□ -0.8
CLN6-219ENST00000637329 RAB37Q96AX2 223 aa10.04□□□□□ -0.8
CLN6-219ENST00000637329 LECT2O14960 151 aa10.03□□□□□ -0.8
CLN6-219ENST00000637329 SND1-IT1Q9HBX3 110 aa10.03□□□□□ -0.8
CLN6-219ENST00000637329 LRCOL1A6NCL2 159 aa10.02□□□□□ -0.81
CLN6-219ENST00000637329 M0R2N4 97 aa10.02□□□□□ -0.81
CLN6-219ENST00000637329 NDUFC2O95298 119 aa10.02□□□□□ -0.81
CLN6-219ENST00000637329 PRO1854Q9UHT4 67 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 120 ms