RNA–Protein interactions for RNA: ENST00000637117.1

CACNA1A-236, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,124 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-236ENST00000637117 FOXA3P55318 350 aaPredicted RBP5.57□□□□□ -1.52
CACNA1A-236ENST00000637117 HBBP68871 147 aa5.57□□□□□ -1.52
CACNA1A-236ENST00000637117 C1orf137Q5JT78 98 aa5.57□□□□□ -1.52
CACNA1A-236ENST00000637117 OR5A1Q8NGJ0 315 aa5.57□□□□□ -1.52
CACNA1A-236ENST00000637117 KRTAP4-9Q9BYQ8 210 aa5.57□□□□□ -1.52
CACNA1A-236ENST00000637117 LOC107984640A0A0U1RRK4 108 aa5.56□□□□□ -1.52
CACNA1A-236ENST00000637117 LINC00959A0A1B0GUT2 108 aa5.56□□□□□ -1.52
CACNA1A-236ENST00000637117 A0A1B0GW15 77 aa5.56□□□□□ -1.52
CACNA1A-236ENST00000637117 LINC00587B1AMM8 73 aa5.56□□□□□ -1.52
CACNA1A-236ENST00000637117 TSTD3H0UI37 97 aa5.56□□□□□ -1.52
CACNA1A-236ENST00000637117 CCL25O15444 150 aa5.56□□□□□ -1.52
CACNA1A-236ENST00000637117 SERF1AO75920 110 aa5.56□□□□□ -1.52
CACNA1A-236ENST00000637117 NCR2O95944 276 aa5.56□□□□□ -1.52
CACNA1A-236ENST00000637117 PRR4Q16378 134 aa5.56□□□□□ -1.52
CACNA1A-236ENST00000637117 MRPL54Q6P161 138 aaKnown RBP5.56□□□□□ -1.52
CACNA1A-236ENST00000637117 LYZL1Q6UWQ5 148 aa5.56□□□□□ -1.52
CACNA1A-236ENST00000637117 GATD1Q8NB37 220 aa5.56□□□□□ -1.52
CACNA1A-236ENST00000637117 RAB4AP20338 218 aa5.55□□□□□ -1.52
CACNA1A-236ENST00000637117 C9orf116Q5BN46 136 aaPredicted RBP5.55□□□□□ -1.52
CACNA1A-236ENST00000637117 BAGE3Q86Y29 109 aa5.55□□□□□ -1.52
CACNA1A-236ENST00000637117 DIRC1Q969H9 104 aa5.55□□□□□ -1.52
CACNA1A-236ENST00000637117 TMEM101Q96IK0 257 aa5.55□□□□□ -1.52
CACNA1A-236ENST00000637117 ALKBH7Q9BT30 221 aaPredicted RBP5.55□□□□□ -1.52
CACNA1A-236ENST00000637117 IGLV4-69A0A075B6H9 119 aa5.54□□□□□ -1.52
CACNA1A-236ENST00000637117 IGLV7-43P04211 117 aa5.54□□□□□ -1.52
CACNA1A-236ENST00000637117 ZNF25P17030 456 aaPredicted RBP5.54□□□□□ -1.52
CACNA1A-236ENST00000637117 SS18Q15532 418 aa5.54□□□□□ -1.52
CACNA1A-236ENST00000637117 CD164L2Q6UWJ8 174 aa5.54□□□□□ -1.52
CACNA1A-236ENST00000637117 PHF5AQ7RTV0 110 aaKnown RBP5.54□□□□□ -1.52
CACNA1A-236ENST00000637117 Q8N9P0 234 aaPredicted RBP5.54□□□□□ -1.52
CACNA1A-236ENST00000637117 RPL39LQ96EH5 51 aaKnown RBP5.54□□□□□ -1.52
CACNA1A-236ENST00000637117 KRTAP4-7Q9BYR0 210 aa5.54□□□□□ -1.52
CACNA1A-236ENST00000637117 A0A1B0GUT8 65 aa5.53□□□□□ -1.52
CACNA1A-236ENST00000637117 NUPR1O60356 82 aa5.53□□□□□ -1.52
CACNA1A-236ENST00000637117 RIGQ13278 110 aa5.53□□□□□ -1.52
CACNA1A-236ENST00000637117 C18orf32Q8TCD1 76 aa5.53□□□□□ -1.52
CACNA1A-236ENST00000637117 IGLV1-50A0A075B6I6 118 aa5.52□□□□□ -1.53
CACNA1A-236ENST00000637117 SDHAF1A6NFY7 115 aa5.52□□□□□ -1.53
CACNA1A-236ENST00000637117 H0Y9J4 135 aa5.52□□□□□ -1.53
CACNA1A-236ENST00000637117 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.52□□□□□ -1.53
CACNA1A-236ENST00000637117 APOMO95445 188 aa5.52□□□□□ -1.53
CACNA1A-236ENST00000637117 PMCHP20382 165 aa5.52□□□□□ -1.53
CACNA1A-236ENST00000637117 KIAA1644Q3SXP7 199 aa5.52□□□□□ -1.53
CACNA1A-236ENST00000637117 MRPL52Q86TS9 123 aaKnown RBP5.52□□□□□ -1.53
CACNA1A-236ENST00000637117 CAMK2N2Q96S95 79 aa5.52□□□□□ -1.53
CACNA1A-236ENST00000637117 CDC42SE2Q9NRR3 84 aa5.52□□□□□ -1.53
CACNA1A-236ENST00000637117 A0A087WZ39 114 aa5.51□□□□□ -1.53
CACNA1A-236ENST00000637117 I3L3M4 83 aa5.51□□□□□ -1.53
CACNA1A-236ENST00000637117 CTRLP40313 264 aa5.51□□□□□ -1.53
CACNA1A-236ENST00000637117 BORCS7Q96B45 105 aa5.51□□□□□ -1.53
CACNA1A-236ENST00000637117 CHCHD1Q96BP2 118 aaKnown RBP5.51□□□□□ -1.53
CACNA1A-236ENST00000637117 CNFNQ9BYD5 112 aa5.51□□□□□ -1.53
CACNA1A-236ENST00000637117 IGKV2D-30A0A075B6S6 120 aa5.5□□□□□ -1.53
CACNA1A-236ENST00000637117 RPL18AQ02543 176 aaKnown RBP5.5□□□□□ -1.53
CACNA1A-236ENST00000637117 TEX43Q6ZNM6 134 aa5.5□□□□□ -1.53
CACNA1A-236ENST00000637117 OPRPNQ99935 248 aaPredicted RBP5.5□□□□□ -1.53
CACNA1A-236ENST00000637117 C2orf88Q9BSF0 95 aa5.5□□□□□ -1.53
CACNA1A-236ENST00000637117 CBY1Q9Y3M2 126 aa5.5□□□□□ -1.53
CACNA1A-236ENST00000637117 FAT4Q6V0I7 4981 aa5.49□□□□□ -1.53
CACNA1A-236ENST00000637117 COX7A2LO14548 114 aa5.49□□□□□ -1.53
CACNA1A-236ENST00000637117 HSBP1O75506 76 aa5.49□□□□□ -1.53
CACNA1A-236ENST00000637117 KRTAP1-4P0C5Y4 121 aa5.49□□□□□ -1.53
CACNA1A-236ENST00000637117 DDTP30046 118 aa5.49□□□□□ -1.53
CACNA1A-236ENST00000637117 UBE2D1P51668 147 aa5.49□□□□□ -1.53
CACNA1A-236ENST00000637117 SMIM15Q7Z3B0 74 aa5.49□□□□□ -1.53
CACNA1A-236ENST00000637117 SMIM29Q86T20 159 aa5.49□□□□□ -1.53
CACNA1A-236ENST00000637117 KRTAP11-1Q8IUC1 163 aa5.49□□□□□ -1.53
CACNA1A-236ENST00000637117 MRAP2Q96G30 205 aa5.49□□□□□ -1.53
CACNA1A-236ENST00000637117 C2orf48Q96LS8 159 aa5.49□□□□□ -1.53
CACNA1A-236ENST00000637117 TRBV6-5A0A0K0K1A5 114 aa5.48□□□□□ -1.53
CACNA1A-236ENST00000637117 RPL13AP40429 203 aaKnown RBP5.47□□□□□ -1.53
CACNA1A-236ENST00000637117 FAM104BQ5XKR9 115 aa5.47□□□□□ -1.53
CACNA1A-236ENST00000637117 C5orf38Q86SI9 138 aa5.47□□□□□ -1.53
CACNA1A-236ENST00000637117 KRTAP4-11Q9BYQ6 195 aa5.47□□□□□ -1.53
CACNA1A-236ENST00000637117 TMEM191AQ9H0A3 160 aa5.47□□□□□ -1.53
CACNA1A-236ENST00000637117 ST20Q9HBF5 79 aa5.47□□□□□ -1.53
CACNA1A-236ENST00000637117 FAM168BA1KXE4 195 aa5.46□□□□□ -1.54
CACNA1A-236ENST00000637117 SMIM1B2RUZ4 78 aa5.46□□□□□ -1.54
CACNA1A-236ENST00000637117 TSPAN13O95857 204 aa5.46□□□□□ -1.54
CACNA1A-236ENST00000637117 LINC00614P0C842 121 aa5.46□□□□□ -1.54
CACNA1A-236ENST00000637117 C3orf79P0CE67 100 aa5.46□□□□□ -1.54
CACNA1A-236ENST00000637117 KRTDAPP60985 99 aa5.46□□□□□ -1.54
CACNA1A-236ENST00000637117 PMCHL1Q16048 86 aa5.46□□□□□ -1.54
CACNA1A-236ENST00000637117 PRO1933Q9H354 126 aa5.46□□□□□ -1.54
CACNA1A-236ENST00000637117 LAMTOR2Q9Y2Q5 125 aa5.46□□□□□ -1.54
CACNA1A-236ENST00000637117 TRAV13-1A0A0B4J241 112 aa5.45□□□□□ -1.54
CACNA1A-236ENST00000637117 C20orf202A1L168 122 aa5.45□□□□□ -1.54
CACNA1A-236ENST00000637117 PPBPP02775 128 aa5.45□□□□□ -1.54
CACNA1A-236ENST00000637117 POLR2KP53803 58 aaKnown RBP5.45□□□□□ -1.54
CACNA1A-236ENST00000637117 SPAG11BQ08648 103 aa5.45□□□□□ -1.54
CACNA1A-236ENST00000637117 ORMDL3Q8N138 153 aa5.45□□□□□ -1.54
CACNA1A-236ENST00000637117 FAM19A2Q8N3H0 131 aa5.45□□□□□ -1.54
CACNA1A-236ENST00000637117 C14orf144Q96I85 54 aa5.45□□□□□ -1.54
CACNA1A-236ENST00000637117 VAMP8Q9BV40 100 aa5.45□□□□□ -1.54
CACNA1A-236ENST00000637117 MRPL35Q9NZE8 188 aaKnown RBP5.45□□□□□ -1.54
CACNA1A-236ENST00000637117 CSDC2Q9Y534 153 aaKnown RBP5.45□□□□□ -1.54
CACNA1A-236ENST00000637117 TRBV27A0A0K0K1C4 114 aa5.44□□□□□ -1.54
CACNA1A-236ENST00000637117 RNASE13Q5GAN3 156 aaKnown RBP5.44□□□□□ -1.54
CACNA1A-236ENST00000637117 FAM19A5Q7Z5A7 132 aaPredicted RBP5.44□□□□□ -1.54
CACNA1A-236ENST00000637117 HSPB8Q9UJY1 196 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms