RNA–Protein interactions for RNA: ENST00000636945.2

SCN8A-212, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 5

Gene SCN8A, Length 3,578 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-212ENST00000636945 IGHV4-61A0A0C4DH41 118 aa5.39□□□□□ -1.55
SCN8A-212ENST00000636945 INSP01308 110 aa5.39□□□□□ -1.55
SCN8A-212ENST00000636945 LINC00158P58513 81 aa5.39□□□□□ -1.55
SCN8A-212ENST00000636945 UBE2E2Q96LR5 201 aa5.39□□□□□ -1.55
SCN8A-212ENST00000636945 MAP6D1Q9H9H5 199 aa5.39□□□□□ -1.55
SCN8A-212ENST00000636945 F8WDY8 70 aa5.39□□□□□ -1.55
SCN8A-212ENST00000636945 C1orf158Q8N1D5 194 aa5.38□□□□□ -1.55
SCN8A-212ENST00000636945 ITPR2Q14571 2701 aa5.38□□□□□ -1.55
SCN8A-212ENST00000636945 J3QLI3 93 aa5.38□□□□□ -1.55
SCN8A-212ENST00000636945 TMEM86BQ8N661 226 aa5.38□□□□□ -1.55
SCN8A-212ENST00000636945 UBL5Q9BZL1 73 aa5.38□□□□□ -1.55
SCN8A-212ENST00000636945 POLQO75417 2590 aa5.38□□□□□ -1.55
SCN8A-212ENST00000636945 CCDC168Q8NDH2 2452 aa5.38□□□□□ -1.55
SCN8A-212ENST00000636945 C6orf223Q8N319 242 aa5.37□□□□□ -1.55
SCN8A-212ENST00000636945 C9orf66Q5T8R8 295 aa5.37□□□□□ -1.55
SCN8A-212ENST00000636945 TRBV7-4A0A0J9YYF1 115 aa5.37□□□□□ -1.55
SCN8A-212ENST00000636945 CXCL6P80162 114 aa5.37□□□□□ -1.55
SCN8A-212ENST00000636945 NDUFC1O43677 76 aa5.36□□□□□ -1.55
SCN8A-212ENST00000636945 LINC01547P58512 204 aaPredicted RBP5.36□□□□□ -1.55
SCN8A-212ENST00000636945 ATP5EP56381 51 aaPredicted RBP5.36□□□□□ -1.55
SCN8A-212ENST00000636945 CCL19Q99731 98 aa5.36□□□□□ -1.55
SCN8A-212ENST00000636945 CELSR2Q9HCU4 2923 aa5.36□□□□□ -1.55
SCN8A-212ENST00000636945 IGLV4-60A0A075B6I1 120 aa5.36□□□□□ -1.55
SCN8A-212ENST00000636945 PAX4O43316 350 aa5.36□□□□□ -1.55
SCN8A-212ENST00000636945 DEFB113Q30KQ7 82 aa5.36□□□□□ -1.55
SCN8A-212ENST00000636945 Q6ZTI0 123 aa5.36□□□□□ -1.55
SCN8A-212ENST00000636945 TRAV10A0A0B4J240 114 aa5.35□□□□□ -1.55
SCN8A-212ENST00000636945 PLAC8L1A1L4L8 177 aa5.35□□□□□ -1.55
SCN8A-212ENST00000636945 Q8IZM0 81 aa5.35□□□□□ -1.55
SCN8A-212ENST00000636945 C11orf44Q8N8P7 122 aa5.35□□□□□ -1.55
SCN8A-212ENST00000636945 APCP25054 2843 aa5.35□□□□□ -1.55
SCN8A-212ENST00000636945 ERC2-IT1O76042 136 aa5.35□□□□□ -1.55
SCN8A-212ENST00000636945 MSMBP08118 114 aa5.35□□□□□ -1.55
SCN8A-212ENST00000636945 LINC00575Q6W349 94 aa5.35□□□□□ -1.55
SCN8A-212ENST00000636945 VPS13CQ709C8 3753 aa5.35□□□□□ -1.55
SCN8A-212ENST00000636945 IGHV4-59P01825 116 aa5.34□□□□□ -1.55
SCN8A-212ENST00000636945 Q6ZVQ6 151 aa5.34□□□□□ -1.55
SCN8A-212ENST00000636945 CRYBG3Q68DQ2 2970 aa5.34□□□□□ -1.55
SCN8A-212ENST00000636945 MYO9AB2RTY4 2548 aa5.34□□□□□ -1.55
SCN8A-212ENST00000636945 TRGV1A0A0A0MS02 117 aa5.34□□□□□ -1.55
SCN8A-212ENST00000636945 ZNF561-AS1K7EIQ3 104 aa5.34□□□□□ -1.55
SCN8A-212ENST00000636945 UBE2L6O14933 153 aa5.34□□□□□ -1.55
SCN8A-212ENST00000636945 ZNF702PQ9H963 129 aa5.34□□□□□ -1.55
SCN8A-212ENST00000636945 TOMM7Q9P0U1 55 aa5.34□□□□□ -1.55
SCN8A-212ENST00000636945 M0R2N4 97 aa5.34□□□□□ -1.56
SCN8A-212ENST00000636945 RMI2Q96E14 147 aa5.34□□□□□ -1.56
SCN8A-212ENST00000636945 ANKRD17O75179 2603 aaKnown RBP5.34□□□□□ -1.56
SCN8A-212ENST00000636945 TEX15Q9BXT5 2789 aa5.33□□□□□ -1.56
SCN8A-212ENST00000636945 SLURP1P55000 103 aa5.33□□□□□ -1.56
SCN8A-212ENST00000636945 TRBV6-8A0A0A6YYG3 113 aa5.33□□□□□ -1.56
SCN8A-212ENST00000636945 IGHV4-28A0A0C4DH34 117 aa5.33□□□□□ -1.56
SCN8A-212ENST00000636945 TRBV7-6A0A0J9YX20 115 aa5.33□□□□□ -1.56
SCN8A-212ENST00000636945 LINC00959A0A1B0GUT2 108 aa5.33□□□□□ -1.56
SCN8A-212ENST00000636945 F8WEM9 126 aa5.33□□□□□ -1.56
SCN8A-212ENST00000636945 COX17Q14061 63 aa5.33□□□□□ -1.56
SCN8A-212ENST00000636945 DEFB114Q30KQ6 69 aa5.33□□□□□ -1.56
SCN8A-212ENST00000636945 DEFB112Q30KQ8 113 aa5.32□□□□□ -1.56
SCN8A-212ENST00000636945 ODF3L2Q3SX64 289 aa5.32□□□□□ -1.56
SCN8A-212ENST00000636945 FBN2P35556 2912 aa5.32□□□□□ -1.56
SCN8A-212ENST00000636945 RBM3P98179 157 aaKnown RBP5.32□□□□□ -1.56
SCN8A-212ENST00000636945 KIAA0087Q14695 138 aa5.32□□□□□ -1.56
SCN8A-212ENST00000636945 IGHV4-31P0DP07 118 aa5.32□□□□□ -1.56
SCN8A-212ENST00000636945 PDE6GP18545 87 aa5.32□□□□□ -1.56
SCN8A-212ENST00000636945 Q8NDZ9 215 aa5.32□□□□□ -1.56
SCN8A-212ENST00000636945 RPL35AP18077 110 aaKnown RBP5.31□□□□□ -1.56
SCN8A-212ENST00000636945 LOC100131303A0A0U1RQF7 123 aa5.31□□□□□ -1.56
SCN8A-212ENST00000636945 H3BQ85 93 aa5.31□□□□□ -1.56
SCN8A-212ENST00000636945 GIG44P09565 113 aaPredicted RBP5.31□□□□□ -1.56
SCN8A-212ENST00000636945 C18orf65Q6ZTR6 163 aa5.31□□□□□ -1.56
SCN8A-212ENST00000636945 LINC00474Q9P2X8 69 aa5.31□□□□□ -1.56
SCN8A-212ENST00000636945 IGHV4-30-2A0A087WSY4 118 aa5.3□□□□□ -1.56
SCN8A-212ENST00000636945 PRR3P79522 188 aaKnown RBP5.3□□□□□ -1.56
SCN8A-212ENST00000636945 WFDC11Q8NEX6 87 aa5.3□□□□□ -1.56
SCN8A-212ENST00000636945 SNURFQ9Y675 71 aa5.3□□□□□ -1.56
SCN8A-212ENST00000636945 FSHBP01225 129 aa5.3□□□□□ -1.56
SCN8A-212ENST00000636945 TM2D3Q9BRN9 247 aa5.3□□□□□ -1.56
SCN8A-212ENST00000636945 PDZD2O15018 2839 aa5.3□□□□□ -1.56
SCN8A-212ENST00000636945 A0A1B0GUV1 79 aa5.3□□□□□ -1.56
SCN8A-212ENST00000636945 C4orf3Q8WVX3 66 aa5.3□□□□□ -1.56
SCN8A-212ENST00000636945 C6orf99Q4VX62 202 aa5.29□□□□□ -1.56
SCN8A-212ENST00000636945 C6orf226Q5I0X4 101 aa5.29□□□□□ -1.56
SCN8A-212ENST00000636945 Q8N3U1 123 aa5.29□□□□□ -1.56
SCN8A-212ENST00000636945 B4DSR2 109 aa5.29□□□□□ -1.56
SCN8A-212ENST00000636945 MIFP14174 115 aa5.29□□□□□ -1.56
SCN8A-212ENST00000636945 C1orf43Q9BWL3 253 aa5.29□□□□□ -1.56
SCN8A-212ENST00000636945 F8P00451 2351 aa5.29□□□□□ -1.56
SCN8A-212ENST00000636945 DEFB136Q30KP8 78 aa5.29□□□□□ -1.56
SCN8A-212ENST00000636945 ESM1Q9NQ30 184 aa5.29□□□□□ -1.56
SCN8A-212ENST00000636945 IGLV6-57P01721 117 aa5.28□□□□□ -1.56
SCN8A-212ENST00000636945 DSCR9P59020 149 aa5.28□□□□□ -1.56
SCN8A-212ENST00000636945 KRTAP1-3Q8IUG1 177 aa5.28□□□□□ -1.56
SCN8A-212ENST00000636945 MUC7Q8TAX7 377 aa5.28□□□□□ -1.56
SCN8A-212ENST00000636945 SORL1Q92673 2214 aa5.28□□□□□ -1.56
SCN8A-212ENST00000636945 Q6YL49 198 aa5.28□□□□□ -1.56
SCN8A-212ENST00000636945 C16orf74Q96GX8 76 aa5.28□□□□□ -1.56
SCN8A-212ENST00000636945 NOP10Q9NPE3 64 aaKnown RBP5.28□□□□□ -1.56
SCN8A-212ENST00000636945 A0A0U1RQV1 116 aa5.27□□□□□ -1.57
SCN8A-212ENST00000636945 FAM229BQ4G0N7 80 aa5.27□□□□□ -1.57
SCN8A-212ENST00000636945 Q6ZTC4 211 aa5.27□□□□□ -1.57
SCN8A-212ENST00000636945 SPATA3Q8NHX4 192 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms