RNA–Protein interactions for RNA: ENST00000636843.1

CTSD-208, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,512 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-208ENST00000636843 IGHV3-30-3P0DP02 117 aa8.47□□□□□ -1.05
CTSD-208ENST00000636843 HERVK_113P63121 156 aa8.47□□□□□ -1.05
CTSD-208ENST00000636843 AMMECR1LQ6DCA0 310 aa8.47□□□□□ -1.05
CTSD-208ENST00000636843 NHP2Q9NX24 153 aaKnown RBP8.47□□□□□ -1.05
CTSD-208ENST00000636843 A0A1B0GWB2 263 aa8.46□□□□□ -1.05
CTSD-208ENST00000636843 RAB37Q96AX2 223 aa8.46□□□□□ -1.05
CTSD-208ENST00000636843 CDC42SE2Q9NRR3 84 aa8.46□□□□□ -1.05
CTSD-208ENST00000636843 H3BUT2 72 aa8.45□□□□□ -1.06
CTSD-208ENST00000636843 CCL25O15444 150 aa8.45□□□□□ -1.06
CTSD-208ENST00000636843 IGHV3-64A0A075B6Q5 118 aa8.44□□□□□ -1.06
CTSD-208ENST00000636843 TRBV6-8A0A0A6YYG3 113 aa8.44□□□□□ -1.06
CTSD-208ENST00000636843 GTF2H5Q6ZYL4 71 aa8.44□□□□□ -1.06
CTSD-208ENST00000636843 A0A1W2PPM0 123 aa8.44□□□□□ -1.06
CTSD-208ENST00000636843 NTN5Q8WTR8 489 aaPredicted RBP8.44□□□□□ -1.06
CTSD-208ENST00000636843 GAGE10A6NGK3 116 aa8.43□□□□□ -1.06
CTSD-208ENST00000636843 TMEM238C9JI98 176 aa8.43□□□□□ -1.06
CTSD-208ENST00000636843 FAM229AH3BQW9 127 aa8.43□□□□□ -1.06
CTSD-208ENST00000636843 PSCAO43653 123 aa8.43□□□□□ -1.06
CTSD-208ENST00000636843 FABP2P12104 132 aa8.43□□□□□ -1.06
CTSD-208ENST00000636843 LINC01556Q5JQF7 62 aa8.43□□□□□ -1.06
CTSD-208ENST00000636843 LINC00242Q5T6M2 205 aa8.43□□□□□ -1.06
CTSD-208ENST00000636843 ATP6V0E2Q8NHE4 81 aa8.43□□□□□ -1.06
CTSD-208ENST00000636843 CDKN2A-AS1Q9UH64 79 aa8.43□□□□□ -1.06
CTSD-208ENST00000636843 IGLV5-52A0A0A0MRZ9 124 aa8.42□□□□□ -1.06
CTSD-208ENST00000636843 TRAV8-3A0A0A6YYJ7 113 aa8.42□□□□□ -1.06
CTSD-208ENST00000636843 LRCOL1A6NCL2 159 aa8.42□□□□□ -1.06
CTSD-208ENST00000636843 IBA57-AS1B1ANH7 110 aa8.42□□□□□ -1.06
CTSD-208ENST00000636843 K7ERJ3 54 aa8.42□□□□□ -1.06
CTSD-208ENST00000636843 IGHV3-30P01768 117 aa8.42□□□□□ -1.06
CTSD-208ENST00000636843 SMR3BP02814 79 aaPredicted RBP8.42□□□□□ -1.06
CTSD-208ENST00000636843 SPINK8P0C7L1 97 aa8.42□□□□□ -1.06
CTSD-208ENST00000636843 IGHV3-30-5P0DP03 117 aa8.42□□□□□ -1.06
CTSD-208ENST00000636843 A0A0J9YXY3 114 aa8.41□□□□□ -1.06
CTSD-208ENST00000636843 K7EP34 96 aa8.41□□□□□ -1.06
CTSD-208ENST00000636843 NDUFA12Q9UI09 145 aa8.41□□□□□ -1.06
CTSD-208ENST00000636843 FLG2Q5D862 2391 aaPredicted RBP8.41□□□□□ -1.06
CTSD-208ENST00000636843 TRAV13-1A0A0B4J241 112 aa8.4□□□□□ -1.06
CTSD-208ENST00000636843 COX6A2Q02221 97 aa8.4□□□□□ -1.06
CTSD-208ENST00000636843 GAGE6Q13070 117 aa8.4□□□□□ -1.06
CTSD-208ENST00000636843 CHCHD5Q9BSY4 110 aa8.4□□□□□ -1.06
CTSD-208ENST00000636843 IGLV5-39A0A0G2JS06 123 aa8.39□□□□□ -1.07
CTSD-208ENST00000636843 NAA38Q9BRA0 125 aaKnown RBP8.39□□□□□ -1.07
CTSD-208ENST00000636843 SPCS1Q9Y6A9 102 aa8.39□□□□□ -1.07
CTSD-208ENST00000636843 MYCBP2O75592 4640 aa8.39□□□□□ -1.07
CTSD-208ENST00000636843 NDUFA1O15239 70 aa8.39□□□□□ -1.07
CTSD-208ENST00000636843 TIMM17BO60830 172 aa8.39□□□□□ -1.07
CTSD-208ENST00000636843 RPL24P83731 157 aaKnown RBP8.39□□□□□ -1.07
CTSD-208ENST00000636843 Q8N814 137 aa8.39□□□□□ -1.07
CTSD-208ENST00000636843 SPANXDQ9BXN6 97 aa8.39□□□□□ -1.07
CTSD-208ENST00000636843 SPANXCQ9NY87 97 aa8.39□□□□□ -1.07
CTSD-208ENST00000636843 SRRM2Q9UQ35 2752 aaKnown RBP8.38□□□□□ -1.07
CTSD-208ENST00000636843 LELP1Q5T871 98 aa8.38□□□□□ -1.07
CTSD-208ENST00000636843 Q9HAA7 133 aa8.38□□□□□ -1.07
CTSD-208ENST00000636843 DNAH8Q96JB1 4490 aa8.37□□□□□ -1.07
CTSD-208ENST00000636843 A0A1B0GUV1 79 aa8.37□□□□□ -1.07
CTSD-208ENST00000636843 SMIM1B2RUZ4 78 aa8.37□□□□□ -1.07
CTSD-208ENST00000636843 HAMPP81172 84 aa8.37□□□□□ -1.07
CTSD-208ENST00000636843 IGLV4-60A0A075B6I1 120 aa8.36□□□□□ -1.07
CTSD-208ENST00000636843 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.36□□□□□ -1.07
CTSD-208ENST00000636843 LITAFQ99732 161 aa8.36□□□□□ -1.07
CTSD-208ENST00000636843 APOMO95445 188 aa8.35□□□□□ -1.07
CTSD-208ENST00000636843 IGHV3-33P01772 117 aa8.35□□□□□ -1.07
CTSD-208ENST00000636843 CFC1BP0CG36 223 aa8.35□□□□□ -1.07
CTSD-208ENST00000636843 CFC1P0CG37 223 aa8.35□□□□□ -1.07
CTSD-208ENST00000636843 CIRBPQ14011 172 aaKnown RBP8.35□□□□□ -1.07
CTSD-208ENST00000636843 MUSTN1Q8IVN3 82 aa8.35□□□□□ -1.07
CTSD-208ENST00000636843 A0A0B4J2C4 111 aa8.34□□□□□ -1.07
CTSD-208ENST00000636843 IFITM1P13164 125 aa8.34□□□□□ -1.07
CTSD-208ENST00000636843 HERV-K104P63124 156 aa8.34□□□□□ -1.07
CTSD-208ENST00000636843 MIAQ16674 131 aa8.34□□□□□ -1.07
CTSD-208ENST00000636843 LYRM7Q5U5X0 104 aa8.34□□□□□ -1.07
CTSD-208ENST00000636843 FAM30AQ9NZY2 134 aa8.34□□□□□ -1.07
CTSD-208ENST00000636843 A4D1N5 150 aa8.34□□□□□ -1.08
CTSD-208ENST00000636843 PRO1854Q9UHT4 67 aa8.34□□□□□ -1.08
CTSD-208ENST00000636843 TMEM262E9PQX1 116 aa8.33□□□□□ -1.08
CTSD-208ENST00000636843 TSPAN13O95857 204 aa8.33□□□□□ -1.08
CTSD-208ENST00000636843 RBX1P62877 108 aa8.33□□□□□ -1.08
CTSD-208ENST00000636843 COPS9Q8WXC6 57 aa8.33□□□□□ -1.08
CTSD-208ENST00000636843 LINC00959A0A1B0GUT2 108 aa8.32□□□□□ -1.08
CTSD-208ENST00000636843 J3QL48 77 aa8.32□□□□□ -1.08
CTSD-208ENST00000636843 PLA2G1BP04054 148 aaKnown RBP8.32□□□□□ -1.08
CTSD-208ENST00000636843 SS18Q15532 418 aa8.32□□□□□ -1.08
CTSD-208ENST00000636843 A0A087WZ39 114 aa8.31□□□□□ -1.08
CTSD-208ENST00000636843 IGHV3OR16-9A0A0B4J2B5 98 aa8.31□□□□□ -1.08
CTSD-208ENST00000636843 IGKV3OR2-268A0A0C4DH90 116 aa8.31□□□□□ -1.08
CTSD-208ENST00000636843 PRSS2P07478 247 aa8.31□□□□□ -1.08
CTSD-208ENST00000636843 ADAMTSL4-AS1Q5T5F5 129 aa8.31□□□□□ -1.08
CTSD-208ENST00000636843 Q6ZSA8 131 aa8.31□□□□□ -1.08
CTSD-208ENST00000636843 ZNF625Q96I27 306 aaPredicted RBP8.31□□□□□ -1.08
CTSD-208ENST00000636843 LINC01561Q8N1V8 128 aa8.3□□□□□ -1.08
CTSD-208ENST00000636843 COX7B2Q8TF08 81 aa8.3□□□□□ -1.08
CTSD-208ENST00000636843 WFDC2Q14508 124 aa8.29□□□□□ -1.08
CTSD-208ENST00000636843 SFTA2Q6UW10 78 aa8.29□□□□□ -1.08
CTSD-208ENST00000636843 PPDPFQ9H3Y8 114 aa8.29□□□□□ -1.08
CTSD-208ENST00000636843 Q8N3U1 123 aa8.29□□□□□ -1.08
CTSD-208ENST00000636843 ERG28Q9UKR5 140 aa8.29□□□□□ -1.08
CTSD-208ENST00000636843 F8W1H4 67 aa8.28□□□□□ -1.08
CTSD-208ENST00000636843 MEIG1Q5JSS6 88 aa8.28□□□□□ -1.08
CTSD-208ENST00000636843 LINC00528Q8N1L1 170 aa8.28□□□□□ -1.08
CTSD-208ENST00000636843 RMI2Q96E14 147 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms