RNA–Protein interactions for RNA: ENST00000636046.1

CDKL5-210, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 5

Gene CDKL5, Length 100 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-210ENST00000636046 DEFB107AQ8IZN7 70 aa-2.25□□□□□ -2.77
CDKL5-210ENST00000636046 FAM9BQ8IZU0 186 aa-2.25□□□□□ -2.77
CDKL5-210ENST00000636046 DEFB104AQ8WTQ1 72 aa-2.25□□□□□ -2.77
CDKL5-210ENST00000636046 TSEN15Q8WW01 171 aaKnown RBP-2.25□□□□□ -2.77
CDKL5-210ENST00000636046 BORCS7Q96B45 105 aa-2.25□□□□□ -2.77
CDKL5-210ENST00000636046 IL20Q9NYY1 176 aa-2.25□□□□□ -2.77
CDKL5-210ENST00000636046 AP4S1Q9Y587 144 aa-2.25□□□□□ -2.77
CDKL5-210ENST00000636046 COMMD10Q9Y6G5 202 aa-2.25□□□□□ -2.77
CDKL5-210ENST00000636046 KIF1AQ12756 1690 aa-2.25□□□□□ -2.77
CDKL5-210ENST00000636046 UHRF1BP1LA0JNW5 1464 aa-2.26□□□□□ -2.77
CDKL5-210ENST00000636046 TRBV27A0A0K0K1C4 114 aa-2.26□□□□□ -2.77
CDKL5-210ENST00000636046 HMGB3O15347 200 aaKnown RBP-2.26□□□□□ -2.77
CDKL5-210ENST00000636046 BANF1O75531 89 aa-2.26□□□□□ -2.77
CDKL5-210ENST00000636046 LEPROTL1O95214 131 aa-2.26□□□□□ -2.77
CDKL5-210ENST00000636046 NDUFC2O95298 119 aa-2.26□□□□□ -2.77
CDKL5-210ENST00000636046 IFNA7P01567 189 aa-2.26□□□□□ -2.77
CDKL5-210ENST00000636046 CSN2P05814 226 aa-2.26□□□□□ -2.77
CDKL5-210ENST00000636046 RPL7P18124 248 aaKnown RBP-2.26□□□□□ -2.77
CDKL5-210ENST00000636046 CBLN1P23435 193 aa-2.26□□□□□ -2.77
CDKL5-210ENST00000636046 NAA20P61599 178 aa-2.26□□□□□ -2.77
CDKL5-210ENST00000636046 MRPS25P82663 173 aaKnown RBP-2.26□□□□□ -2.77
CDKL5-210ENST00000636046 VAMP3Q15836 100 aa-2.26□□□□□ -2.77
CDKL5-210ENST00000636046 RGS21Q2M5E4 152 aa-2.26□□□□□ -2.77
CDKL5-210ENST00000636046 TMEM95Q3KNT9 176 aa-2.26□□□□□ -2.77
CDKL5-210ENST00000636046 HDDC3Q8N4P3 179 aa-2.26□□□□□ -2.77
CDKL5-210ENST00000636046 MGARPQ8TDB4 240 aa-2.26□□□□□ -2.77
CDKL5-210ENST00000636046 TSLPQ969D9 159 aa-2.26□□□□□ -2.77
CDKL5-210ENST00000636046 LLPHQ9BRT6 129 aaKnown RBP-2.26□□□□□ -2.77
CDKL5-210ENST00000636046 HYPKQ9NX55 129 aa-2.26□□□□□ -2.77
CDKL5-210ENST00000636046 USE1Q9NZ43 259 aa-2.26□□□□□ -2.77
CDKL5-210ENST00000636046 LAMTOR2Q9Y2Q5 125 aa-2.26□□□□□ -2.77
CDKL5-210ENST00000636046 RGPD3A6NKT7 1758 aaPredicted RBP-2.26□□□□□ -2.77
CDKL5-210ENST00000636046 RGPD4Q7Z3J3 1758 aa-2.26□□□□□ -2.77
CDKL5-210ENST00000636046 DAPK1P53355 1430 aa-2.26□□□□□ -2.77
CDKL5-210ENST00000636046 UHRF1BP1Q6BDS2 1440 aa-2.26□□□□□ -2.77
CDKL5-210ENST00000636046 SCAPERQ9BY12 1400 aa-2.26□□□□□ -2.77
CDKL5-210ENST00000636046 CLASP1Q7Z460 1538 aa-2.27□□□□□ -2.77
CDKL5-210ENST00000636046 CAMSAP1Q5T5Y3 1602 aa-2.27□□□□□ -2.77
CDKL5-210ENST00000636046 TOPAZ1Q8N9V7 1692 aa-2.27□□□□□ -2.77
CDKL5-210ENST00000636046 ITSN2Q9NZM3 1697 aa-2.27□□□□□ -2.77
CDKL5-210ENST00000636046 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP-2.27□□□□□ -2.77
CDKL5-210ENST00000636046 TMEM213A2RRL7 107 aa-2.27□□□□□ -2.77
CDKL5-210ENST00000636046 C7orf77A4D0Y5 90 aa-2.27□□□□□ -2.77
CDKL5-210ENST00000636046 TNFSF15O95150 251 aa-2.27□□□□□ -2.77
CDKL5-210ENST00000636046 APOEP02649 317 aa-2.27□□□□□ -2.77
CDKL5-210ENST00000636046 COX5BP10606 129 aa-2.27□□□□□ -2.77
CDKL5-210ENST00000636046 HSP90AB2PQ58FF8 381 aa-2.27□□□□□ -2.77
CDKL5-210ENST00000636046 S100A7L2Q5SY68 101 aa-2.27□□□□□ -2.77
CDKL5-210ENST00000636046 FAM45BPQ6NSW5 357 aa-2.27□□□□□ -2.77
CDKL5-210ENST00000636046 CCDC70Q6NSX1 233 aa-2.27□□□□□ -2.77
CDKL5-210ENST00000636046 TAS2R42Q7RTR8 314 aa-2.27□□□□□ -2.77
CDKL5-210ENST00000636046 LSMEM1Q8N8F7 131 aa-2.27□□□□□ -2.77
CDKL5-210ENST00000636046 SLC35B4Q969S0 331 aa-2.27□□□□□ -2.77
CDKL5-210ENST00000636046 SEC11CQ9BY50 192 aa-2.27□□□□□ -2.77
CDKL5-210ENST00000636046 GEMIN7Q9H840 131 aaKnown RBP-2.27□□□□□ -2.77
CDKL5-210ENST00000636046 MYH8P13535 1937 aa-2.27□□□□□ -2.77
CDKL5-210ENST00000636046 ROCK1Q13464 1354 aa-2.27□□□□□ -2.77
CDKL5-210ENST00000636046 MAP3K5Q99683 1374 aa-2.27□□□□□ -2.77
CDKL5-210ENST00000636046 ADGRL2O95490 1459 aa-2.27□□□□□ -2.77
CDKL5-210ENST00000636046 SNAPC4Q5SXM2 1469 aa-2.27□□□□□ -2.77
CDKL5-210ENST00000636046 TRAV13-2A0A0B4J235 113 aa-2.28□□□□□ -2.77
CDKL5-210ENST00000636046 SFTA3P0C7M3 94 aa-2.28□□□□□ -2.77
CDKL5-210ENST00000636046 HIST1H1BP16401 226 aaKnown RBP-2.28□□□□□ -2.77
CDKL5-210ENST00000636046 MYL12AP19105 171 aa-2.28□□□□□ -2.77
CDKL5-210ENST00000636046 OGNP20774 298 aaKnown RBP-2.28□□□□□ -2.77
CDKL5-210ENST00000636046 SRP9P49458 86 aaKnown RBP-2.28□□□□□ -2.77
CDKL5-210ENST00000636046 CLLU1Q5K131 121 aa-2.28□□□□□ -2.77
CDKL5-210ENST00000636046 DNM1P34Q6PK57 102 aa-2.28□□□□□ -2.77
CDKL5-210ENST00000636046 SFTA2Q6UW10 78 aa-2.28□□□□□ -2.77
CDKL5-210ENST00000636046 LINC00305Q7Z4B0 112 aa-2.28□□□□□ -2.77
CDKL5-210ENST00000636046 TMCO2Q7Z6W1 182 aaPredicted RBP-2.28□□□□□ -2.77
CDKL5-210ENST00000636046 TAC4Q86UU9 113 aa-2.28□□□□□ -2.77
CDKL5-210ENST00000636046 OTUD6BQ8N6M0 293 aa-2.28□□□□□ -2.77
CDKL5-210ENST00000636046 GPATCH11Q8N954 259 aa-2.28□□□□□ -2.77
CDKL5-210ENST00000636046 DPH3P1Q9H4G8 78 aa-2.28□□□□□ -2.77
CDKL5-210ENST00000636046 AHSPQ9NZD4 102 aa-2.28□□□□□ -2.77
CDKL5-210ENST00000636046 CEP152O94986 1710 aa-2.28□□□□□ -2.78
CDKL5-210ENST00000636046 DOT1LQ8TEK3 1739 aa-2.28□□□□□ -2.78
CDKL5-210ENST00000636046 MYH2Q9UKX2 1941 aa-2.29□□□□□ -2.78
CDKL5-210ENST00000636046 TRAV13-1A0A0B4J241 112 aa-2.29□□□□□ -2.78
CDKL5-210ENST00000636046 TRAV21A0A0B4J279 112 aa-2.29□□□□□ -2.78
CDKL5-210ENST00000636046 IQCF5A8MTL0 148 aa-2.29□□□□□ -2.78
CDKL5-210ENST00000636046 H3BMG7 143 aa-2.29□□□□□ -2.78
CDKL5-210ENST00000636046 CHKB-CPT1BH3BT56 60 aa-2.29□□□□□ -2.78
CDKL5-210ENST00000636046 CASQ2O14958 399 aaPredicted RBP-2.29□□□□□ -2.78
CDKL5-210ENST00000636046 TNFAIP8O95379 198 aa-2.29□□□□□ -2.78
CDKL5-210ENST00000636046 CD52P31358 61 aa-2.29□□□□□ -2.78
CDKL5-210ENST00000636046 DAOAP59103 153 aa-2.29□□□□□ -2.78
CDKL5-210ENST00000636046 MAGOHP61326 146 aaKnown RBP-2.29□□□□□ -2.78
CDKL5-210ENST00000636046 RTL8BQ17RB0 113 aa-2.29□□□□□ -2.78
CDKL5-210ENST00000636046 FAM228AQ86W67 206 aa-2.29□□□□□ -2.78
CDKL5-210ENST00000636046 ATP6V1C2Q8NEY4 427 aa-2.29□□□□□ -2.78
CDKL5-210ENST00000636046 MAGOHBQ96A72 148 aaKnown RBP-2.29□□□□□ -2.78
CDKL5-210ENST00000636046 RTL8AQ9BWD3 113 aa-2.29□□□□□ -2.78
CDKL5-210ENST00000636046 SH3BGRL3Q9H299 93 aa-2.29□□□□□ -2.78
CDKL5-210ENST00000636046 OTORQ9NRC9 128 aa-2.29□□□□□ -2.78
CDKL5-210ENST00000636046 PRNDQ9UKY0 176 aa-2.29□□□□□ -2.78
CDKL5-210ENST00000636046 PIK3C2GO75747 1445 aa-2.29□□□□□ -2.78
CDKL5-210ENST00000636046 SAMD9Q5K651 1589 aa-2.3□□□□□ -2.78
CDKL5-210ENST00000636046 IFT140Q96RY7 1462 aa-2.3□□□□□ -2.78
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms