RNA–Protein interactions for RNA: ENST00000629960.2

LINC01828-211, Transcript of long intergenic non-protein coding RNA 1828, humanhuman

TSL 5

Gene LINC01828, Length 345 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01828-211ENST00000629960 ZNF22P17026 224 aaPredicted RBP3.52□□□□□ -1.85
LINC01828-211ENST00000629960 HINT1P49773 126 aaPredicted RBP3.52□□□□□ -1.85
LINC01828-211ENST00000629960 UBE2D1P51668 147 aa3.52□□□□□ -1.85
LINC01828-211ENST00000629960 RBX1P62877 108 aa3.52□□□□□ -1.85
LINC01828-211ENST00000629960 Q6ZRP5 223 aa3.52□□□□□ -1.85
LINC01828-211ENST00000629960 BOD1L2Q8IYS8 172 aa3.52□□□□□ -1.85
LINC01828-211ENST00000629960 B9D2Q9BPU9 175 aa3.52□□□□□ -1.85
LINC01828-211ENST00000629960 CDC42SE2Q9NRR3 84 aa3.52□□□□□ -1.85
LINC01828-211ENST00000629960 FBN1P35555 2871 aaKnown RBP3.52□□□□□ -1.85
LINC01828-211ENST00000629960 TMEM223A0PJW6 202 aa3.51□□□□□ -1.85
LINC01828-211ENST00000629960 IGLL5B9A064 214 aa3.51□□□□□ -1.85
LINC01828-211ENST00000629960 J3QQQ9 107 aa3.51□□□□□ -1.85
LINC01828-211ENST00000629960 CCL25O15444 150 aa3.51□□□□□ -1.85
LINC01828-211ENST00000629960 SPINK8P0C7L1 97 aa3.51□□□□□ -1.85
LINC01828-211ENST00000629960 HSD52Q0P140 79 aa3.51□□□□□ -1.85
LINC01828-211ENST00000629960 SRSF9Q13242 221 aaKnown RBP eCLIP3.51□□□□□ -1.85
LINC01828-211ENST00000629960 CLPSL2Q6UWE3 100 aa3.51□□□□□ -1.85
LINC01828-211ENST00000629960 PCP2Q8IVA1 136 aa3.51□□□□□ -1.85
LINC01828-211ENST00000629960 HIST1H4GQ99525 98 aa3.51□□□□□ -1.85
LINC01828-211ENST00000629960 NOTCH1P46531 2555 aa3.51□□□□□ -1.85
LINC01828-211ENST00000629960 IGLV4-60A0A075B6I1 120 aa3.5□□□□□ -1.85
LINC01828-211ENST00000629960 IGKV2D-26A0A0A0MRZ7 120 aa3.5□□□□□ -1.85
LINC01828-211ENST00000629960 A6NDN8 102 aa3.5□□□□□ -1.85
LINC01828-211ENST00000629960 EPM2AB3EWF7 344 aa3.5□□□□□ -1.85
LINC01828-211ENST00000629960 IGHV3-30P01768 117 aa3.5□□□□□ -1.85
LINC01828-211ENST00000629960 IGHV3-33P01772 117 aa3.5□□□□□ -1.85
LINC01828-211ENST00000629960 IGHV3-30-3P0DP02 117 aa3.5□□□□□ -1.85
LINC01828-211ENST00000629960 IGHV3-30-5P0DP03 117 aa3.5□□□□□ -1.85
LINC01828-211ENST00000629960 CCL18P55774 89 aa3.5□□□□□ -1.85
LINC01828-211ENST00000629960 CIRBPQ14011 172 aaKnown RBP3.5□□□□□ -1.85
LINC01828-211ENST00000629960 LBHQ53QV2 105 aaPredicted RBP3.5□□□□□ -1.85
LINC01828-211ENST00000629960 MPV17L2Q567V2 206 aa3.5□□□□□ -1.85
LINC01828-211ENST00000629960 COL5A1-AS1Q5SY13 56 aa3.5□□□□□ -1.85
LINC01828-211ENST00000629960 LINC00242Q5T6M2 205 aa3.5□□□□□ -1.85
LINC01828-211ENST00000629960 LYPD5Q6UWN5 251 aa3.5□□□□□ -1.85
LINC01828-211ENST00000629960 UBE2DNLQ8IWF7 75 aa3.5□□□□□ -1.85
LINC01828-211ENST00000629960 TOMM7Q9P0U1 55 aa3.5□□□□□ -1.85
LINC01828-211ENST00000629960 HIGD1BQ9P298 99 aa3.5□□□□□ -1.85
LINC01828-211ENST00000629960 CDKN2A-AS1Q9UH64 79 aa3.5□□□□□ -1.85
LINC01828-211ENST00000629960 NDUFA12Q9UI09 145 aa3.5□□□□□ -1.85
LINC01828-211ENST00000629960 MGAM2Q2M2H8 2515 aa3.5□□□□□ -1.85
LINC01828-211ENST00000629960 NBEAL2Q6ZNJ1 2754 aa3.49□□□□□ -1.85
LINC01828-211ENST00000629960 TRAV8-3A0A0A6YYJ7 113 aa3.49□□□□□ -1.85
LINC01828-211ENST00000629960 IGHV1-58A0A0C4DH39 117 aa3.49□□□□□ -1.85
LINC01828-211ENST00000629960 LINC00959A0A1B0GUT2 108 aa3.49□□□□□ -1.85
LINC01828-211ENST00000629960 TMEM238C9JI98 176 aa3.49□□□□□ -1.85
LINC01828-211ENST00000629960 COX7A2LO14548 114 aa3.49□□□□□ -1.85
LINC01828-211ENST00000629960 APOMO95445 188 aa3.49□□□□□ -1.85
LINC01828-211ENST00000629960 XCL1P47992 114 aa3.49□□□□□ -1.85
LINC01828-211ENST00000629960 REG3AQ06141 175 aa3.49□□□□□ -1.85
LINC01828-211ENST00000629960 TAL2Q16559 108 aa3.49□□□□□ -1.85
LINC01828-211ENST00000629960 KRTAP21-3Q3LHN1 58 aa3.49□□□□□ -1.85
LINC01828-211ENST00000629960 MEIG1Q5JSS6 88 aa3.49□□□□□ -1.85
LINC01828-211ENST00000629960 CFAP161Q6P656 301 aa3.49□□□□□ -1.85
LINC01828-211ENST00000629960 LINC00269Q8N2A0 174 aa3.49□□□□□ -1.85
LINC01828-211ENST00000629960 TTTY13Q9BZ97 58 aa3.49□□□□□ -1.85
LINC01828-211ENST00000629960 KLK12Q9UKR0 248 aa3.49□□□□□ -1.85
LINC01828-211ENST00000629960 KLK5Q9Y337 293 aaPredicted RBP3.49□□□□□ -1.85
LINC01828-211ENST00000629960 IGLV10-54A0A075B6I4 117 aa3.48□□□□□ -1.85
LINC01828-211ENST00000629960 C6orf226Q5I0X4 101 aa3.48□□□□□ -1.85
LINC01828-211ENST00000629960 FAM19A3Q7Z5A8 133 aa3.48□□□□□ -1.85
LINC01828-211ENST00000629960 C5orf38Q86SI9 138 aa3.48□□□□□ -1.85
LINC01828-211ENST00000629960 Q8N377 158 aa3.48□□□□□ -1.85
LINC01828-211ENST00000629960 COX7B2Q8TF08 81 aa3.48□□□□□ -1.85
LINC01828-211ENST00000629960 ORAOV1Q8WV07 137 aa3.48□□□□□ -1.85
LINC01828-211ENST00000629960 COPS9Q8WXC6 57 aa3.48□□□□□ -1.85
LINC01828-211ENST00000629960 CHCHD10Q8WYQ3 142 aaPredicted RBP3.48□□□□□ -1.85
LINC01828-211ENST00000629960 UBE2WQ96B02 151 aa3.48□□□□□ -1.85
LINC01828-211ENST00000629960 RMI2Q96E14 147 aa3.48□□□□□ -1.85
LINC01828-211ENST00000629960 SNHG12Q9BXW3 62 aa3.48□□□□□ -1.85
LINC01828-211ENST00000629960 TP73-AS1Q9UF72 201 aa3.48□□□□□ -1.85
LINC01828-211ENST00000629960 TRAV8-4A0A0B4J246 113 aa3.47□□□□□ -1.85
LINC01828-211ENST00000629960 NUPR2A6NF83 97 aa3.47□□□□□ -1.85
LINC01828-211ENST00000629960 CKS1BP61024 79 aa3.47□□□□□ -1.85
LINC01828-211ENST00000629960 HERV-K104P63124 156 aa3.47□□□□□ -1.85
LINC01828-211ENST00000629960 COX6A2Q02221 97 aa3.47□□□□□ -1.85
LINC01828-211ENST00000629960 MIAQ16674 131 aa3.47□□□□□ -1.85
LINC01828-211ENST00000629960 ESRGQ1W209 222 aa3.47□□□□□ -1.85
LINC01828-211ENST00000629960 BVES-AS1Q5T3Y7 98 aa3.47□□□□□ -1.85
LINC01828-211ENST00000629960 SFTA2Q6UW10 78 aa3.47□□□□□ -1.85
LINC01828-211ENST00000629960 CD164L2Q6UWJ8 174 aa3.47□□□□□ -1.85
LINC01828-211ENST00000629960 C2orf91Q6ZV80 131 aa3.47□□□□□ -1.85
LINC01828-211ENST00000629960 WFDC10BQ8IUB3 73 aa3.47□□□□□ -1.85
LINC01828-211ENST00000629960 CEND1Q8N111 149 aa3.47□□□□□ -1.85
LINC01828-211ENST00000629960 C10orf126Q8N4M7 172 aa3.47□□□□□ -1.85
LINC01828-211ENST00000629960 FAM104AQ969W3 186 aa3.47□□□□□ -1.85
LINC01828-211ENST00000629960 Q9H8V8 135 aa3.47□□□□□ -1.85
LINC01828-211ENST00000629960 A0A087WZ39 114 aa3.46□□□□□ -1.86
LINC01828-211ENST00000629960 NDUFA1O15239 70 aa3.46□□□□□ -1.86
LINC01828-211ENST00000629960 SMIM13P0DJ93 91 aa3.46□□□□□ -1.86
LINC01828-211ENST00000629960 TSPEAR-AS2P59090 65 aa3.46□□□□□ -1.86
LINC01828-211ENST00000629960 ZFAND6Q6FIF0 208 aa3.46□□□□□ -1.86
LINC01828-211ENST00000629960 LINC01561Q8N1V8 128 aa3.46□□□□□ -1.86
LINC01828-211ENST00000629960 ZNF625Q96I27 306 aaPredicted RBP3.46□□□□□ -1.86
LINC01828-211ENST00000629960 PRR34Q9NV39 138 aa3.46□□□□□ -1.86
LINC01828-211ENST00000629960 NHP2Q9NX24 153 aaKnown RBP3.46□□□□□ -1.86
LINC01828-211ENST00000629960 IGKV2D-24A0A075B6R9 120 aa3.45□□□□□ -1.86
LINC01828-211ENST00000629960 IGHV3OR16-9A0A0B4J2B5 98 aa3.45□□□□□ -1.86
LINC01828-211ENST00000629960 A0A0J9YXY3 114 aa3.45□□□□□ -1.86
LINC01828-211ENST00000629960 A0A0U1RRA0 63 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms