RNA–Protein interactions for RNA: ENST00000625171.3

LINC00963-220, long intergenic non-protein coding RNA 963, humanhuman

TSL 5

Gene LINC00963, Length 830 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-220ENST00000625171 NBDYA0A0U1RRE5 68 aa7.82□□□□□ -1.16
LINC00963-220ENST00000625171 CIRBPQ14011 172 aaKnown RBP7.82□□□□□ -1.16
LINC00963-220ENST00000625171 LBHQ53QV2 105 aaPredicted RBP7.82□□□□□ -1.16
LINC00963-220ENST00000625171 SCGB1D4Q6XE38 83 aa7.82□□□□□ -1.16
LINC00963-220ENST00000625171 LITAFQ99732 161 aa7.82□□□□□ -1.16
LINC00963-220ENST00000625171 HERC2O95714 4834 aa7.82□□□□□ -1.16
LINC00963-220ENST00000625171 GVQW2A0A096LPI5 108 aaPredicted RBP7.81□□□□□ -1.16
LINC00963-220ENST00000625171 TMEM238C9JI98 176 aa7.81□□□□□ -1.16
LINC00963-220ENST00000625171 M0R143 59 aa7.81□□□□□ -1.16
LINC00963-220ENST00000625171 PRSS2P07478 247 aa7.81□□□□□ -1.16
LINC00963-220ENST00000625171 COX17Q14061 63 aa7.81□□□□□ -1.16
LINC00963-220ENST00000625171 ORAOV1Q8WV07 137 aa7.81□□□□□ -1.16
LINC00963-220ENST00000625171 C2orf48Q96LS8 159 aa7.81□□□□□ -1.16
LINC00963-220ENST00000625171 SPANXDQ9BXN6 97 aa7.81□□□□□ -1.16
LINC00963-220ENST00000625171 SPANXCQ9NY87 97 aa7.81□□□□□ -1.16
LINC00963-220ENST00000625171 IGKV2D-24A0A075B6R9 120 aa7.8□□□□□ -1.16
LINC00963-220ENST00000625171 NTN5Q8WTR8 489 aaPredicted RBP7.8□□□□□ -1.16
LINC00963-220ENST00000625171 KRTAP1-5Q9BYS1 174 aa7.8□□□□□ -1.16
LINC00963-220ENST00000625171 IFITM1P13164 125 aa7.79□□□□□ -1.16
LINC00963-220ENST00000625171 GCSHP23434 173 aa7.79□□□□□ -1.16
LINC00963-220ENST00000625171 BVES-AS1Q5T3Y7 98 aa7.79□□□□□ -1.16
LINC00963-220ENST00000625171 C15orf56Q8N910 161 aa7.79□□□□□ -1.16
LINC00963-220ENST00000625171 LOC107984156A0A0G2JMH3 177 aa7.78□□□□□ -1.16
LINC00963-220ENST00000625171 CKS1BP61024 79 aa7.78□□□□□ -1.16
LINC00963-220ENST00000625171 Q6ZR54 194 aa7.78□□□□□ -1.16
LINC00963-220ENST00000625171 ARL17AQ8IVW1 177 aa7.78□□□□□ -1.16
LINC00963-220ENST00000625171 CEND1Q8N111 149 aa7.78□□□□□ -1.16
LINC00963-220ENST00000625171 HIST1H4GQ99525 98 aa7.78□□□□□ -1.16
LINC00963-220ENST00000625171 SNHG12Q9BXW3 62 aa7.78□□□□□ -1.16
LINC00963-220ENST00000625171 TOMM7Q9P0U1 55 aa7.78□□□□□ -1.16
LINC00963-220ENST00000625171 TRBV30A0A0K0K1B3 111 aa7.77□□□□□ -1.17
LINC00963-220ENST00000625171 SPAG11BQ08648 103 aa7.77□□□□□ -1.17
LINC00963-220ENST00000625171 SRSF9Q13242 221 aaKnown RBP eCLIP7.77□□□□□ -1.17
LINC00963-220ENST00000625171 RNF151Q2KHN1 245 aa7.77□□□□□ -1.17
LINC00963-220ENST00000625171 COPS9Q8WXC6 57 aa7.77□□□□□ -1.17
LINC00963-220ENST00000625171 LINC00476Q8WZB0 136 aa7.77□□□□□ -1.17
LINC00963-220ENST00000625171 Q9HAA7 133 aa7.77□□□□□ -1.17
LINC00963-220ENST00000625171 ZNF561-AS1K7EIQ3 104 aa7.76□□□□□ -1.17
LINC00963-220ENST00000625171 ADAMTSL4-AS1Q5T5F5 129 aa7.76□□□□□ -1.17
LINC00963-220ENST00000625171 PCLOQ9Y6V0 5065 aa7.76□□□□□ -1.17
LINC00963-220ENST00000625171 Q6ZRN7 208 aaPredicted RBP7.75□□□□□ -1.17
LINC00963-220ENST00000625171 ERG28Q9UKR5 140 aa7.75□□□□□ -1.17
LINC00963-220ENST00000625171 VPS13DQ5THJ4 4388 aa7.75□□□□□ -1.17
LINC00963-220ENST00000625171 TMEM238LA0A1B0GVL6 79 aa7.74□□□□□ -1.17
LINC00963-220ENST00000625171 A0A1B0GWB2 263 aa7.74□□□□□ -1.17
LINC00963-220ENST00000625171 A6NJY4 79 aa7.74□□□□□ -1.17
LINC00963-220ENST00000625171 HINT1P49773 126 aaPredicted RBP7.74□□□□□ -1.17
LINC00963-220ENST00000625171 RPL24P83731 157 aaKnown RBP7.74□□□□□ -1.17
LINC00963-220ENST00000625171 MEIG1Q5JSS6 88 aa7.74□□□□□ -1.17
LINC00963-220ENST00000625171 C2orf82Q6UX34 121 aa7.74□□□□□ -1.17
LINC00963-220ENST00000625171 A6NDN8 102 aa7.73□□□□□ -1.17
LINC00963-220ENST00000625171 USP17L23D6RBM5 183 aa7.73□□□□□ -1.17
LINC00963-220ENST00000625171 C14orf177Q52M58 125 aa7.73□□□□□ -1.17
LINC00963-220ENST00000625171 UNQ6190/PRO20217Q6UXQ8 127 aa7.73□□□□□ -1.17
LINC00963-220ENST00000625171 HECTD4Q9Y4D8 3996 aa7.72□□□□□ -1.17
LINC00963-220ENST00000625171 LY6G6CO95867 125 aa7.72□□□□□ -1.17
LINC00963-220ENST00000625171 SMIM13P0DJ93 91 aa7.72□□□□□ -1.17
LINC00963-220ENST00000625171 FXYD2P54710 66 aa7.72□□□□□ -1.17
LINC00963-220ENST00000625171 COL5A1-AS1Q5SY13 56 aa7.72□□□□□ -1.17
LINC00963-220ENST00000625171 MUSTN1Q8IVN3 82 aa7.72□□□□□ -1.17
LINC00963-220ENST00000625171 C6orf223Q8N319 242 aa7.72□□□□□ -1.17
LINC00963-220ENST00000625171 LINC00308Q8TCZ7 52 aa7.72□□□□□ -1.17
LINC00963-220ENST00000625171 EREGO14944 169 aa7.71□□□□□ -1.18
LINC00963-220ENST00000625171 TLX1NBP0CAT3 122 aa7.71□□□□□ -1.18
LINC00963-220ENST00000625171 SYCNQ0VAF6 134 aa7.71□□□□□ -1.18
LINC00963-220ENST00000625171 CAMK2N2Q96S95 79 aa7.71□□□□□ -1.18
LINC00963-220ENST00000625171 KMT2AQ03164 3969 aa7.71□□□□□ -1.18
LINC00963-220ENST00000625171 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.7□□□□□ -1.18
LINC00963-220ENST00000625171 LRCOL1A6NCL2 159 aa7.7□□□□□ -1.18
LINC00963-220ENST00000625171 LINC00158P58513 81 aa7.7□□□□□ -1.18
LINC00963-220ENST00000625171 CNBPP62633 177 aaKnown RBP7.7□□□□□ -1.18
LINC00963-220ENST00000625171 C10orf25Q5T742 122 aa7.7□□□□□ -1.18
LINC00963-220ENST00000625171 MIR7-3HGQ8N6C7 128 aa7.7□□□□□ -1.18
LINC00963-220ENST00000625171 C6orf48Q9UBA6 75 aa7.7□□□□□ -1.18
LINC00963-220ENST00000625171 PSCAO43653 123 aa7.69□□□□□ -1.18
LINC00963-220ENST00000625171 HIGD2BQ4VC39 106 aa7.69□□□□□ -1.18
LINC00963-220ENST00000625171 LCE2DQ5TA82 110 aaPredicted RBP7.69□□□□□ -1.18
LINC00963-220ENST00000625171 RYR1P21817 5038 aa7.68□□□□□ -1.18
LINC00963-220ENST00000625171 A0A0B4J2C4 111 aa7.68□□□□□ -1.18
LINC00963-220ENST00000625171 A4D1N5 150 aa7.68□□□□□ -1.18
LINC00963-220ENST00000625171 NDUFC2-KCTD14E9PQ53 114 aa7.68□□□□□ -1.18
LINC00963-220ENST00000625171 NDUFC2O95298 119 aa7.68□□□□□ -1.18
LINC00963-220ENST00000625171 Q6ZRU5 148 aa7.68□□□□□ -1.18
LINC00963-220ENST00000625171 DNAH10Q8IVF4 4471 aa7.68□□□□□ -1.18
LINC00963-220ENST00000625171 SLPIP03973 132 aa7.67□□□□□ -1.18
LINC00963-220ENST00000625171 CFC1BP0CG36 223 aa7.67□□□□□ -1.18
LINC00963-220ENST00000625171 CFC1P0CG37 223 aa7.67□□□□□ -1.18
LINC00963-220ENST00000625171 PFN2P35080 140 aa7.67□□□□□ -1.18
LINC00963-220ENST00000625171 SOSTDC1Q6X4U4 206 aa7.67□□□□□ -1.18
LINC00963-220ENST00000625171 LINC00526Q96FQ7 95 aa7.67□□□□□ -1.18
LINC00963-220ENST00000625171 KIAA1109Q2LD37 5005 aa7.67□□□□□ -1.18
LINC00963-220ENST00000625171 EIF4EBP3O60516 100 aaPredicted RBP7.66□□□□□ -1.18
LINC00963-220ENST00000625171 C1orf134Q5TEV5 83 aa7.66□□□□□ -1.18
LINC00963-220ENST00000625171 DAND5Q8N907 189 aa7.66□□□□□ -1.18
LINC00963-220ENST00000625171 CARD19Q96LW7 228 aa7.66□□□□□ -1.18
LINC00963-220ENST00000625171 BATFQ16520 125 aa7.65□□□□□ -1.18
LINC00963-220ENST00000625171 C9orf116Q5BN46 136 aaPredicted RBP7.65□□□□□ -1.18
LINC00963-220ENST00000625171 SND1-IT1Q9HBX3 110 aa7.65□□□□□ -1.18
LINC00963-220ENST00000625171 NHP2Q9NX24 153 aaKnown RBP7.65□□□□□ -1.18
LINC00963-220ENST00000625171 PKIGQ9Y2B9 76 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms