RNA–Protein interactions for RNA: ENST00000624931.1

PCF11-207, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

Gene PCF11, Length 1,720 nt, Biotype TEC, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-207ENST00000624931 EGFEM1PQ0D2K5 195 aa12.4□□□□□ -0.42
PCF11-207ENST00000624931 TMEM243Q9BU79 118 aa12.4□□□□□ -0.42
PCF11-207ENST00000624931 LINC00694P0DN24 101 aa12.4□□□□□ -0.43
PCF11-207ENST00000624931 IGHV4-30-4P0DP06 118 aa12.4□□□□□ -0.43
PCF11-207ENST00000624931 NTM-AS1Q6ZSK4 140 aa12.38□□□□□ -0.43
PCF11-207ENST00000624931 CRPP02741 224 aa12.37□□□□□ -0.43
PCF11-207ENST00000624931 H0YGX0 51 aa12.37□□□□□ -0.43
PCF11-207ENST00000624931 DEFB135Q30KP9 77 aa12.35□□□□□ -0.43
PCF11-207ENST00000624931 COX7B2Q8TF08 81 aa12.35□□□□□ -0.43
PCF11-207ENST00000624931 A0A0U1RRA0 63 aa12.34□□□□□ -0.43
PCF11-207ENST00000624931 PRB2P02812 416 aaPredicted RBP12.34□□□□□ -0.43
PCF11-207ENST00000624931 MALP21145 153 aa12.34□□□□□ -0.43
PCF11-207ENST00000624931 TRBV6-4A0A1B0GX49 114 aa12.34□□□□□ -0.43
PCF11-207ENST00000624931 PLAC8L1A1L4L8 177 aa12.34□□□□□ -0.43
PCF11-207ENST00000624931 CHCHD5Q9BSY4 110 aa12.34□□□□□ -0.43
PCF11-207ENST00000624931 C16orf74Q96GX8 76 aa12.33□□□□□ -0.44
PCF11-207ENST00000624931 FAM236AA0A1B0GUQ0 79 aa12.32□□□□□ -0.44
PCF11-207ENST00000624931 FAM236BA0A1B0GV22 79 aa12.32□□□□□ -0.44
PCF11-207ENST00000624931 APOC4P55056 127 aa12.32□□□□□ -0.44
PCF11-207ENST00000624931 Q6ZTI0 123 aa12.32□□□□□ -0.44
PCF11-207ENST00000624931 C5orf38Q86SI9 138 aa12.32□□□□□ -0.44
PCF11-207ENST00000624931 X6R8D5 127 aa12.32□□□□□ -0.44
PCF11-207ENST00000624931 IBA57-AS1B1ANH7 110 aa12.31□□□□□ -0.44
PCF11-207ENST00000624931 KIR2DL5BQ8NHK3 375 aa12.31□□□□□ -0.44
PCF11-207ENST00000624931 SND1-IT1Q9HBX3 110 aa12.31□□□□□ -0.44
PCF11-207ENST00000624931 NOP10Q9NPE3 64 aaKnown RBP12.31□□□□□ -0.44
PCF11-207ENST00000624931 DNAH3Q8TD57 4116 aa12.31□□□□□ -0.44
PCF11-207ENST00000624931 DNAL4O96015 105 aa12.31□□□□□ -0.44
PCF11-207ENST00000624931 NOTCH1P46531 2555 aa12.3□□□□□ -0.44
PCF11-207ENST00000624931 UQCRQO14949 82 aa12.29□□□□□ -0.44
PCF11-207ENST00000624931 C3orf22Q8N5N4 141 aa12.29□□□□□ -0.44
PCF11-207ENST00000624931 MIR7-3HGQ8N6C7 128 aa12.29□□□□□ -0.44
PCF11-207ENST00000624931 FAM218AQ96MZ4 157 aa12.29□□□□□ -0.44
PCF11-207ENST00000624931 C22orf24Q9Y442 160 aa12.29□□□□□ -0.44
PCF11-207ENST00000624931 SMCR5Q8TEV8 140 aa12.28□□□□□ -0.44
PCF11-207ENST00000624931 RETNQ9HD89 108 aa12.28□□□□□ -0.44
PCF11-207ENST00000624931 DEFB4AO15263 64 aa12.27□□□□□ -0.45
PCF11-207ENST00000624931 NBEAL2Q6ZNJ1 2754 aa12.27□□□□□ -0.45
PCF11-207ENST00000624931 LINC00158P58513 81 aa12.26□□□□□ -0.45
PCF11-207ENST00000624931 MGAM2Q2M2H8 2515 aa12.26□□□□□ -0.45
PCF11-207ENST00000624931 TRGV2A0A075B6R0 118 aa12.25□□□□□ -0.45
PCF11-207ENST00000624931 GAGE2AQ6NT46 116 aa12.25□□□□□ -0.45
PCF11-207ENST00000624931 LINC00337Q8N6G1 96 aa12.25□□□□□ -0.45
PCF11-207ENST00000624931 LINC00526Q96FQ7 95 aa12.25□□□□□ -0.45
PCF11-207ENST00000624931 OBSCN-AS1Q96MR7 158 aa12.25□□□□□ -0.45
PCF11-207ENST00000624931 IGKV2-28A0A075B6P5 120 aa12.25□□□□□ -0.45
PCF11-207ENST00000624931 A0A087WZ39 114 aa12.25□□□□□ -0.45
PCF11-207ENST00000624931 IGKV2D-28P01615 120 aa12.25□□□□□ -0.45
PCF11-207ENST00000624931 SMIM11BQ8TCY0 68 aa12.25□□□□□ -0.45
PCF11-207ENST00000624931 IGHV3OR16-9A0A0B4J2B5 98 aa12.24□□□□□ -0.45
PCF11-207ENST00000624931 IGHV4-28A0A0C4DH34 117 aa12.24□□□□□ -0.45
PCF11-207ENST00000624931 ATOX1O00244 68 aa12.24□□□□□ -0.45
PCF11-207ENST00000624931 LINC01561Q8N1V8 128 aa12.24□□□□□ -0.45
PCF11-207ENST00000624931 TRBV6-8A0A0A6YYG3 113 aa12.23□□□□□ -0.45
PCF11-207ENST00000624931 TRGV4A0A0C4DH28 118 aa12.23□□□□□ -0.45
PCF11-207ENST00000624931 K7EIL1 84 aa12.23□□□□□ -0.45
PCF11-207ENST00000624931 NBEAL1Q6ZS30 2694 aa12.23□□□□□ -0.45
PCF11-207ENST00000624931 A0A1B0GX51 115 aa12.23□□□□□ -0.45
PCF11-207ENST00000624931 CCL18P55774 89 aa12.23□□□□□ -0.45
PCF11-207ENST00000624931 C9orf153Q5TBE3 101 aa12.23□□□□□ -0.45
PCF11-207ENST00000624931 SMIM20Q8N5G0 67 aa12.23□□□□□ -0.45
PCF11-207ENST00000624931 TOMM7Q9P0U1 55 aa12.23□□□□□ -0.45
PCF11-207ENST00000624931 SMIM9A6NGZ8 99 aa12.21□□□□□ -0.45
PCF11-207ENST00000624931 HIST1H4AP62805 103 aaKnown RBP12.21□□□□□ -0.45
PCF11-207ENST00000624931 KPRPQ5T749 579 aaPredicted RBP12.21□□□□□ -0.45
PCF11-207ENST00000624931 Q6JHZ5 121 aa12.21□□□□□ -0.45
PCF11-207ENST00000624931 Q9HAA7 133 aa12.21□□□□□ -0.45
PCF11-207ENST00000624931 COX7CP15954 63 aa12.2□□□□□ -0.46
PCF11-207ENST00000624931 Q8NAQ8 132 aa12.2□□□□□ -0.46
PCF11-207ENST00000624931 KLK5Q9Y337 293 aaPredicted RBP12.2□□□□□ -0.46
PCF11-207ENST00000624931 DEFB130BP0DP73 79 aa12.2□□□□□ -0.46
PCF11-207ENST00000624931 DEFB130AP0DP74 79 aa12.2□□□□□ -0.46
PCF11-207ENST00000624931 A0A087WYN8 130 aa12.18□□□□□ -0.46
PCF11-207ENST00000624931 CELA1Q9UNI1 258 aa12.18□□□□□ -0.46
PCF11-207ENST00000624931 FHL2Q14192 279 aa12.17□□□□□ -0.46
PCF11-207ENST00000624931 PAX4O43316 350 aa12.17□□□□□ -0.46
PCF11-207ENST00000624931 MIFP14174 115 aa12.17□□□□□ -0.46
PCF11-207ENST00000624931 S100A7L2Q5SY68 101 aa12.17□□□□□ -0.46
PCF11-207ENST00000624931 IGLV4-60A0A075B6I1 120 aa12.16□□□□□ -0.46
PCF11-207ENST00000624931 CRYGAP11844 174 aa12.16□□□□□ -0.46
PCF11-207ENST00000624931 LINC00612Q8N6U2 182 aa12.16□□□□□ -0.46
PCF11-207ENST00000624931 ORMDL1Q9P0S3 153 aa12.16□□□□□ -0.46
PCF11-207ENST00000624931 LINC00959A0A1B0GUT2 108 aa12.15□□□□□ -0.46
PCF11-207ENST00000624931 SS18Q15532 418 aa12.15□□□□□ -0.46
PCF11-207ENST00000624931 C6orf226Q5I0X4 101 aa12.15□□□□□ -0.46
PCF11-207ENST00000624931 Q8IZM0 81 aa12.15□□□□□ -0.46
PCF11-207ENST00000624931 LOC100131303A0A0U1RQF7 123 aa12.14□□□□□ -0.47
PCF11-207ENST00000624931 A0A1B0GUV1 79 aa12.14□□□□□ -0.47
PCF11-207ENST00000624931 JMJD7-PLA2G4BH0Y9G9 81 aa12.14□□□□□ -0.47
PCF11-207ENST00000624931 MRAPQ8TCY5 172 aa12.14□□□□□ -0.47
PCF11-207ENST00000624931 LINC00167Q96N53 147 aa12.14□□□□□ -0.47
PCF11-207ENST00000624931 LECT2O14960 151 aa12.14□□□□□ -0.47
PCF11-207ENST00000624931 RPL18AQ02543 176 aaKnown RBP12.14□□□□□ -0.47
PCF11-207ENST00000624931 OR13C6PQ8NH95 151 aa12.14□□□□□ -0.47
PCF11-207ENST00000624931 C14orf132Q9NPU4 83 aa12.13□□□□□ -0.47
PCF11-207ENST00000624931 TENM3Q9P273 2699 aa12.13□□□□□ -0.47
PCF11-207ENST00000624931 IGKV3OR2-268A0A0C4DH90 116 aa12.12□□□□□ -0.47
PCF11-207ENST00000624931 LYRM9A8MSI8 78 aa12.12□□□□□ -0.47
PCF11-207ENST00000624931 NDUFC2O95298 119 aa12.12□□□□□ -0.47
PCF11-207ENST00000624931 PFN2P35080 140 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms