RNA–Protein interactions for RNA: ENST00000624811.1

USH1C-211, Transcript of USH1 protein network component harmonin, humanhuman

Gene USH1C, Length 1,194 nt, Biotype TEC, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-211ENST00000624811 UBE2BP63146 152 aa8.34□□□□□ -1.07
USH1C-211ENST00000624811 KRTAP7-1Q8IUC3 87 aa8.34□□□□□ -1.07
USH1C-211ENST00000624811 DIRC1Q969H9 104 aa8.34□□□□□ -1.07
USH1C-211ENST00000624811 UBE2D1P51668 147 aa8.33□□□□□ -1.08
USH1C-211ENST00000624811 C2orf66Q6UXQ4 117 aa8.33□□□□□ -1.08
USH1C-211ENST00000624811 Q8N8P6 123 aa8.33□□□□□ -1.08
USH1C-211ENST00000624811 PACRGQ96M98 296 aaPredicted RBP8.33□□□□□ -1.08
USH1C-211ENST00000624811 C2orf88Q9BSF0 95 aa8.33□□□□□ -1.08
USH1C-211ENST00000624811 TOMM7Q9P0U1 55 aa8.33□□□□□ -1.08
USH1C-211ENST00000624811 TRBV30A0A0K0K1B3 111 aa8.32□□□□□ -1.08
USH1C-211ENST00000624811 LOC100996750A0A140TA64 210 aa8.32□□□□□ -1.08
USH1C-211ENST00000624811 PRSS47A8MTI9 375 aa8.32□□□□□ -1.08
USH1C-211ENST00000624811 H0Y9J4 135 aa8.32□□□□□ -1.08
USH1C-211ENST00000624811 KIAA1644Q3SXP7 199 aa8.32□□□□□ -1.08
USH1C-211ENST00000624811 C9orf129Q5T035 196 aaKnown RBP8.32□□□□□ -1.08
USH1C-211ENST00000624811 Q6ZN92 141 aa8.32□□□□□ -1.08
USH1C-211ENST00000624811 LINC00173Q6ZV60 143 aa8.32□□□□□ -1.08
USH1C-211ENST00000624811 KRTAP4-6Q9BYQ5 205 aa8.32□□□□□ -1.08
USH1C-211ENST00000624811 CYSLTR1Q9Y271 337 aa8.32□□□□□ -1.08
USH1C-211ENST00000624811 NDUFC2-KCTD14E9PQ53 114 aa8.31□□□□□ -1.08
USH1C-211ENST00000624811 PRSS2P07478 247 aa8.31□□□□□ -1.08
USH1C-211ENST00000624811 VCX2Q9H322 139 aa8.31□□□□□ -1.08
USH1C-211ENST00000624811 LAMTOR2Q9Y2Q5 125 aa8.31□□□□□ -1.08
USH1C-211ENST00000624811 LPAP08519 4548 aa8.3□□□□□ -1.08
USH1C-211ENST00000624811 HIST1H2BKO60814 126 aa8.3□□□□□ -1.08
USH1C-211ENST00000624811 HIST1H2BJP06899 126 aa8.3□□□□□ -1.08
USH1C-211ENST00000624811 HIST1H2BOP23527 126 aa8.3□□□□□ -1.08
USH1C-211ENST00000624811 HIST1H2BBP33778 126 aa8.3□□□□□ -1.08
USH1C-211ENST00000624811 HIST1H2BDP58876 126 aa8.3□□□□□ -1.08
USH1C-211ENST00000624811 HIST1H2BCP62807 126 aa8.3□□□□□ -1.08
USH1C-211ENST00000624811 HIST2H2BEQ16778 126 aa8.3□□□□□ -1.08
USH1C-211ENST00000624811 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.3□□□□□ -1.08
USH1C-211ENST00000624811 LINC00469Q8N7U9 141 aa8.3□□□□□ -1.08
USH1C-211ENST00000624811 HIST1H2BHQ93079 126 aa8.3□□□□□ -1.08
USH1C-211ENST00000624811 HIST1H2BNQ99877 126 aa8.3□□□□□ -1.08
USH1C-211ENST00000624811 HIST1H2BMQ99879 126 aa8.3□□□□□ -1.08
USH1C-211ENST00000624811 CKS1BP61024 79 aa8.29□□□□□ -1.08
USH1C-211ENST00000624811 ORMDL2Q53FV1 153 aa8.29□□□□□ -1.08
USH1C-211ENST00000624811 LCE2CQ5TA81 110 aa8.29□□□□□ -1.08
USH1C-211ENST00000624811 AMELXQ99217 191 aa8.29□□□□□ -1.08
USH1C-211ENST00000624811 LINC01561Q8N1V8 128 aa8.28□□□□□ -1.08
USH1C-211ENST00000624811 IGIPA6NJ69 53 aa8.27□□□□□ -1.09
USH1C-211ENST00000624811 NDUFA6P56556 154 aa8.27□□□□□ -1.09
USH1C-211ENST00000624811 C6orf226Q5I0X4 101 aa8.27□□□□□ -1.09
USH1C-211ENST00000624811 ALKBH7Q9BT30 221 aaPredicted RBP8.27□□□□□ -1.09
USH1C-211ENST00000624811 S100A6P06703 90 aa8.26□□□□□ -1.09
USH1C-211ENST00000624811 KRTAP1-4P0C5Y4 121 aa8.26□□□□□ -1.09
USH1C-211ENST00000624811 XAGE1AQ9HD64 81 aa8.26□□□□□ -1.09
USH1C-211ENST00000624811 NXT2Q9NPJ8 142 aaKnown RBP8.26□□□□□ -1.09
USH1C-211ENST00000624811 CDKN2A-AS1Q9UH64 79 aa8.26□□□□□ -1.09
USH1C-211ENST00000624811 Q8IZM0 81 aa8.25□□□□□ -1.09
USH1C-211ENST00000624811 GEMIN7Q9H840 131 aaKnown RBP8.25□□□□□ -1.09
USH1C-211ENST00000624811 IGLV1-50A0A075B6I6 118 aa8.24□□□□□ -1.09
USH1C-211ENST00000624811 HERVK_113P63121 156 aa8.24□□□□□ -1.09
USH1C-211ENST00000624811 C18orf32Q8TCD1 76 aa8.24□□□□□ -1.09
USH1C-211ENST00000624811 C22orf24Q9Y442 160 aa8.24□□□□□ -1.09
USH1C-211ENST00000624811 K7EMI3 77 aa8.23□□□□□ -1.09
USH1C-211ENST00000624811 NPSP0C0P6 89 aa8.23□□□□□ -1.09
USH1C-211ENST00000624811 FAM19A3Q7Z5A8 133 aa8.23□□□□□ -1.09
USH1C-211ENST00000624811 SNRPEP62304 92 aaKnown RBP8.22□□□□□ -1.09
USH1C-211ENST00000624811 COA6Q5JTJ3 125 aaKnown RBP8.22□□□□□ -1.09
USH1C-211ENST00000624811 PAPPA-AS1Q5QFB9 102 aa8.22□□□□□ -1.09
USH1C-211ENST00000624811 BAGE3Q86Y29 109 aa8.22□□□□□ -1.09
USH1C-211ENST00000624811 TOMM6Q96B49 74 aa8.22□□□□□ -1.09
USH1C-211ENST00000624811 TIMM17AQ99595 171 aa8.22□□□□□ -1.09
USH1C-211ENST00000624811 C5orf52A6NGY3 159 aa8.21□□□□□ -1.1
USH1C-211ENST00000624811 F8VRH5 84 aa8.21□□□□□ -1.1
USH1C-211ENST00000624811 SEC11AP67812 179 aa8.21□□□□□ -1.1
USH1C-211ENST00000624811 SCGB3A1Q96QR1 104 aa8.21□□□□□ -1.1
USH1C-211ENST00000624811 ZNF861PO60384 105 aa8.2□□□□□ -1.1
USH1C-211ENST00000624811 LBHQ53QV2 105 aaPredicted RBP8.2□□□□□ -1.1
USH1C-211ENST00000624811 SMIM1B2RUZ4 78 aa8.19□□□□□ -1.1
USH1C-211ENST00000624811 SERF1AO75920 110 aa8.19□□□□□ -1.1
USH1C-211ENST00000624811 G0S2P27469 103 aa8.19□□□□□ -1.1
USH1C-211ENST00000624811 LINC00310P59036 64 aa8.19□□□□□ -1.1
USH1C-211ENST00000624811 PRR4Q16378 134 aa8.19□□□□□ -1.1
USH1C-211ENST00000624811 ERASQ7Z444 233 aa8.19□□□□□ -1.1
USH1C-211ENST00000624811 NUPR1O60356 82 aa8.18□□□□□ -1.1
USH1C-211ENST00000624811 RPL13AP40429 203 aaKnown RBP8.18□□□□□ -1.1
USH1C-211ENST00000624811 MRPL55Q7Z7F7 128 aaKnown RBP8.18□□□□□ -1.1
USH1C-211ENST00000624811 HIST3H2BBQ8N257 126 aa8.18□□□□□ -1.1
USH1C-211ENST00000624811 COX7B2Q8TF08 81 aa8.18□□□□□ -1.1
USH1C-211ENST00000624811 URB1-AS1Q96HZ7 61 aa8.18□□□□□ -1.1
USH1C-211ENST00000624811 GAGE10A6NGK3 116 aa8.17□□□□□ -1.1
USH1C-211ENST00000624811 RPL37AP8A6NKH3 93 aa8.17□□□□□ -1.1
USH1C-211ENST00000624811 SPINK8P0C7L1 97 aa8.17□□□□□ -1.1
USH1C-211ENST00000624811 LINC00614P0C842 121 aa8.17□□□□□ -1.1
USH1C-211ENST00000624811 CXCL5P42830 114 aa8.17□□□□□ -1.1
USH1C-211ENST00000624811 PDZD11Q5EBL8 140 aa8.17□□□□□ -1.1
USH1C-211ENST00000624811 FA2HQ7L5A8 372 aa8.17□□□□□ -1.1
USH1C-211ENST00000624811 CHCHD1Q96BP2 118 aaKnown RBP8.17□□□□□ -1.1
USH1C-211ENST00000624811 LOC105371267A0A1B0GV96 52 aa8.16□□□□□ -1.1
USH1C-211ENST00000624811 TINCRA0A1B0GVN0 87 aa8.16□□□□□ -1.1
USH1C-211ENST00000624811 TSPAN13O95857 204 aa8.16□□□□□ -1.1
USH1C-211ENST00000624811 S100A2P29034 98 aa8.16□□□□□ -1.1
USH1C-211ENST00000624811 BCE1O60756 84 aa8.15□□□□□ -1.1
USH1C-211ENST00000624811 HSBP1O75506 76 aa8.15□□□□□ -1.1
USH1C-211ENST00000624811 LORP23490 312 aaPredicted RBP8.15□□□□□ -1.1
USH1C-211ENST00000624811 LINC00167Q96N53 147 aa8.15□□□□□ -1.1
USH1C-211ENST00000624811 CST9LQ9H4G1 147 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms