RNA–Protein interactions for RNA: ENST00000624341.3

ERCC6-213, Transcript of ERCC excision repair 6, chromatin remodeling factor, humanhuman

TSL 1 (best)

Gene ERCC6, Length 5,761 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6-213ENST00000624341 COX8CQ7Z4L0 72 aa4.08□□□□□ -1.76
ERCC6-213ENST00000624341 LRRC75A-AS1Q8N1F1 130 aa4.08□□□□□ -1.76
ERCC6-213ENST00000624341 MTORP42345 2549 aa4.08□□□□□ -1.76
ERCC6-213ENST00000624341 FAM19A1Q7Z5A9 133 aa4.08□□□□□ -1.76
ERCC6-213ENST00000624341 SPENQ96T58 3664 aaKnown RBP4.08□□□□□ -1.76
ERCC6-213ENST00000624341 PRRC2CQ9Y520 2896 aaKnown RBP4.08□□□□□ -1.76
ERCC6-213ENST00000624341 AVPP01185 164 aa4.08□□□□□ -1.76
ERCC6-213ENST00000624341 PRR3P79522 188 aaKnown RBP4.08□□□□□ -1.76
ERCC6-213ENST00000624341 FREM2Q5SZK8 3169 aa4.08□□□□□ -1.76
ERCC6-213ENST00000624341 A0A087WZ39 114 aa4.08□□□□□ -1.76
ERCC6-213ENST00000624341 FAM19A5Q7Z5A7 132 aaPredicted RBP4.08□□□□□ -1.76
ERCC6-213ENST00000624341 CDIP1Q9H305 208 aa4.08□□□□□ -1.76
ERCC6-213ENST00000624341 NUPR2A6NF83 97 aa4.07□□□□□ -1.76
ERCC6-213ENST00000624341 SYCNQ0VAF6 134 aa4.07□□□□□ -1.76
ERCC6-213ENST00000624341 WFDC13Q8IUB5 93 aa4.07□□□□□ -1.76
ERCC6-213ENST00000624341 CHCHD7Q9BUK0 85 aa4.07□□□□□ -1.76
ERCC6-213ENST00000624341 A0A087WYN8 130 aa4.07□□□□□ -1.76
ERCC6-213ENST00000624341 A0A0J9YWU9 116 aa4.07□□□□□ -1.76
ERCC6-213ENST00000624341 NTM-AS1Q6ZSK4 140 aa4.07□□□□□ -1.76
ERCC6-213ENST00000624341 SPTBN4Q9H254 2564 aa4.07□□□□□ -1.76
ERCC6-213ENST00000624341 FRYLO94915 3013 aa4.07□□□□□ -1.76
ERCC6-213ENST00000624341 C9orf116Q5BN46 136 aaPredicted RBP4.07□□□□□ -1.76
ERCC6-213ENST00000624341 DEFB131BA0A096LNP1 70 aa4.06□□□□□ -1.76
ERCC6-213ENST00000624341 NDUFC1O43677 76 aa4.06□□□□□ -1.76
ERCC6-213ENST00000624341 RPL28P46779 137 aaKnown RBP4.06□□□□□ -1.76
ERCC6-213ENST00000624341 MRGPRG-AS1Q2M3A8 158 aa4.06□□□□□ -1.76
ERCC6-213ENST00000624341 SERP1Q9Y6X1 66 aa4.06□□□□□ -1.76
ERCC6-213ENST00000624341 CHD8Q9HCK8 2581 aa4.06□□□□□ -1.76
ERCC6-213ENST00000624341 ZNF73O43830 326 aaPredicted RBP4.06□□□□□ -1.76
ERCC6-213ENST00000624341 AMELXQ99217 191 aa4.06□□□□□ -1.76
ERCC6-213ENST00000624341 CELA1Q9UNI1 258 aa4.06□□□□□ -1.76
ERCC6-213ENST00000624341 ODF3L2Q3SX64 289 aa4.06□□□□□ -1.76
ERCC6-213ENST00000624341 UNQ6190/PRO20217Q6UXQ8 127 aa4.06□□□□□ -1.76
ERCC6-213ENST00000624341 TET2Q6N021 2002 aaPredicted RBP4.06□□□□□ -1.76
ERCC6-213ENST00000624341 IGLV4-60A0A075B6I1 120 aa4.06□□□□□ -1.76
ERCC6-213ENST00000624341 CYSRT1A8MQ03 144 aa4.06□□□□□ -1.76
ERCC6-213ENST00000624341 Q6ZSN1 163 aa4.05□□□□□ -1.76
ERCC6-213ENST00000624341 Q8IZM0 81 aa4.05□□□□□ -1.76
ERCC6-213ENST00000624341 PPDPFQ9H3Y8 114 aa4.05□□□□□ -1.76
ERCC6-213ENST00000624341 RPL37AP8A6NKH3 93 aa4.05□□□□□ -1.76
ERCC6-213ENST00000624341 M0R378 163 aa4.05□□□□□ -1.76
ERCC6-213ENST00000624341 LINC01006Q8NI28 216 aa4.05□□□□□ -1.76
ERCC6-213ENST00000624341 ZNF706Q9Y5V0 76 aaPredicted RBP4.05□□□□□ -1.76
ERCC6-213ENST00000624341 V9GYY9 64 aa4.05□□□□□ -1.76
ERCC6-213ENST00000624341 WDFY4Q6ZS81 3184 aa4.05□□□□□ -1.76
ERCC6-213ENST00000624341 CPAMD8Q8IZJ3 1885 aa4.05□□□□□ -1.76
ERCC6-213ENST00000624341 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.05□□□□□ -1.76
ERCC6-213ENST00000624341 LOC107984640A0A0U1RRK4 108 aa4.05□□□□□ -1.76
ERCC6-213ENST00000624341 SOSTDC1Q6X4U4 206 aa4.05□□□□□ -1.76
ERCC6-213ENST00000624341 MRPL55Q7Z7F7 128 aaKnown RBP4.05□□□□□ -1.76
ERCC6-213ENST00000624341 PRR15LQ9BU68 103 aa4.05□□□□□ -1.76
ERCC6-213ENST00000624341 MIFP14174 115 aa4.05□□□□□ -1.76
ERCC6-213ENST00000624341 SMCPP49901 116 aaPredicted RBP4.05□□□□□ -1.76
ERCC6-213ENST00000624341 Q8N814 137 aa4.05□□□□□ -1.76
ERCC6-213ENST00000624341 FAM30AQ9NZY2 134 aa4.05□□□□□ -1.76
ERCC6-213ENST00000624341 LRRK2Q5S007 2527 aa4.05□□□□□ -1.76
ERCC6-213ENST00000624341 EXPH5Q8NEV8 1989 aa4.04□□□□□ -1.76
ERCC6-213ENST00000624341 SMIM26A0A096LP01 95 aa4.04□□□□□ -1.76
ERCC6-213ENST00000624341 MUC4Q99102 2169 aa4.04□□□□□ -1.76
ERCC6-213ENST00000624341 A0A1W2PPR1 153 aa4.04□□□□□ -1.76
ERCC6-213ENST00000624341 ATP5EP56381 51 aaPredicted RBP4.04□□□□□ -1.76
ERCC6-213ENST00000624341 LINC00337Q8N6G1 96 aa4.04□□□□□ -1.76
ERCC6-213ENST00000624341 TRAV7A0A075B6U4 112 aa4.04□□□□□ -1.76
ERCC6-213ENST00000624341 POLQO75417 2590 aa4.04□□□□□ -1.76
ERCC6-213ENST00000624341 COX17Q14061 63 aa4.04□□□□□ -1.76
ERCC6-213ENST00000624341 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.04□□□□□ -1.76
ERCC6-213ENST00000624341 LINC00846Q9NV44 126 aa4.04□□□□□ -1.76
ERCC6-213ENST00000624341 CELSR3Q9NYQ7 3312 aa4.03□□□□□ -1.76
ERCC6-213ENST00000624341 KPRPQ5T749 579 aaPredicted RBP4.03□□□□□ -1.76
ERCC6-213ENST00000624341 LELP1Q5T871 98 aa4.03□□□□□ -1.76
ERCC6-213ENST00000624341 TRBV10-3A0A0K0K1G6 114 aa4.03□□□□□ -1.76
ERCC6-213ENST00000624341 Q8N3U1 123 aa4.03□□□□□ -1.76
ERCC6-213ENST00000624341 KIF25-AS1Q9Y6Z4 181 aa4.03□□□□□ -1.76
ERCC6-213ENST00000624341 USP24Q9UPU5 2620 aa4.03□□□□□ -1.76
ERCC6-213ENST00000624341 INAFM1C9JVW0 142 aa4.02□□□□□ -1.77
ERCC6-213ENST00000624341 M0R2N4 97 aa4.02□□□□□ -1.77
ERCC6-213ENST00000624341 A6NED7 52 aa4.02□□□□□ -1.77
ERCC6-213ENST00000624341 C1orf195Q5TG92 126 aa4.02□□□□□ -1.77
ERCC6-213ENST00000624341 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.02□□□□□ -1.77
ERCC6-213ENST00000624341 A8MTW9 85 aa4.02□□□□□ -1.77
ERCC6-213ENST00000624341 PRO0461Q9UI25 63 aa4.02□□□□□ -1.77
ERCC6-213ENST00000624341 DMDP11532 3685 aa4.02□□□□□ -1.77
ERCC6-213ENST00000624341 DHRS4-AS1Q9P1J3 65 aa4.02□□□□□ -1.77
ERCC6-213ENST00000624341 VPS13AQ96RL7 3174 aa4.01□□□□□ -1.77
ERCC6-213ENST00000624341 NANOS2P60321 138 aaKnown RBP4.01□□□□□ -1.77
ERCC6-213ENST00000624341 SPINK6Q6UWN8 80 aa4.01□□□□□ -1.77
ERCC6-213ENST00000624341 CSDC2Q9Y534 153 aaKnown RBP4.01□□□□□ -1.77
ERCC6-213ENST00000624341 DCHS1Q96JQ0 3298 aa4.01□□□□□ -1.77
ERCC6-213ENST00000624341 DMXL1Q9Y485 3027 aa4.01□□□□□ -1.77
ERCC6-213ENST00000624341 Q8N2B8 174 aa4.01□□□□□ -1.77
ERCC6-213ENST00000624341 J3QL48 77 aa4□□□□□ -1.77
ERCC6-213ENST00000624341 CFAP47Q6ZTR5 3102 aa4□□□□□ -1.77
ERCC6-213ENST00000624341 LINC00315P59091 139 aa4□□□□□ -1.77
ERCC6-213ENST00000624341 FHL2Q14192 279 aa4□□□□□ -1.77
ERCC6-213ENST00000624341 RAI1Q7Z5J4 1906 aaPredicted RBP4□□□□□ -1.77
ERCC6-213ENST00000624341 BEAN1Q3B7T3 259 aa4□□□□□ -1.77
ERCC6-213ENST00000624341 C6orf223Q8N319 242 aa4□□□□□ -1.77
ERCC6-213ENST00000624341 TRAV10A0A0B4J240 114 aa4□□□□□ -1.77
ERCC6-213ENST00000624341 TRBV7-7A0A0K0K1E9 115 aa4□□□□□ -1.77
ERCC6-213ENST00000624341 LINC01546A6NGU7 62 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms