RNA–Protein interactions for RNA: ENST00000624032.3

ATRX-213, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 1 (best)

Gene ATRX, Length 3,071 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-213ENST00000624032 DNAJC30Q96LL9 226 aa8.14□□□□□ -1.11
ATRX-213ENST00000624032 NOP10Q9NPE3 64 aaKnown RBP8.14□□□□□ -1.11
ATRX-213ENST00000624032 CXCL5P42830 114 aa8.14□□□□□ -1.11
ATRX-213ENST00000624032 HERVK_113P63121 156 aa8.14□□□□□ -1.11
ATRX-213ENST00000624032 COX6A2Q02221 97 aa8.14□□□□□ -1.11
ATRX-213ENST00000624032 KRTAP21-3Q3LHN1 58 aa8.14□□□□□ -1.11
ATRX-213ENST00000624032 PPDPFQ9H3Y8 114 aa8.14□□□□□ -1.11
ATRX-213ENST00000624032 SOSTDC1Q6X4U4 206 aa8.14□□□□□ -1.11
ATRX-213ENST00000624032 LINC00526Q96FQ7 95 aa8.14□□□□□ -1.11
ATRX-213ENST00000624032 INAFM2P0DMQ5 153 aa8.13□□□□□ -1.11
ATRX-213ENST00000624032 NACAE9PAV3 2078 aa8.13□□□□□ -1.11
ATRX-213ENST00000624032 TRGV1A0A0A0MS02 117 aa8.13□□□□□ -1.11
ATRX-213ENST00000624032 IGHV3-53P01767 116 aa8.13□□□□□ -1.11
ATRX-213ENST00000624032 LINC00694P0DN24 101 aa8.13□□□□□ -1.11
ATRX-213ENST00000624032 FAM222AQ5U5X8 452 aa8.13□□□□□ -1.11
ATRX-213ENST00000624032 Q6ZTI0 123 aa8.13□□□□□ -1.11
ATRX-213ENST00000624032 IL17DQ8TAD2 202 aa8.13□□□□□ -1.11
ATRX-213ENST00000624032 MRAPQ8TCY5 172 aa8.13□□□□□ -1.11
ATRX-213ENST00000624032 C16orf74Q96GX8 76 aa8.12□□□□□ -1.11
ATRX-213ENST00000624032 C5orf38Q86SI9 138 aa8.12□□□□□ -1.11
ATRX-213ENST00000624032 LINC00242Q5T6M2 205 aa8.11□□□□□ -1.11
ATRX-213ENST00000624032 OVOL2Q9BRP0 275 aa8.11□□□□□ -1.11
ATRX-213ENST00000624032 IGHV4-28A0A0C4DH34 117 aa8.11□□□□□ -1.11
ATRX-213ENST00000624032 SMIM1B2RUZ4 78 aa8.11□□□□□ -1.11
ATRX-213ENST00000624032 GAGE2AQ6NT46 116 aa8.11□□□□□ -1.11
ATRX-213ENST00000624032 C22orf24Q9Y442 160 aa8.11□□□□□ -1.11
ATRX-213ENST00000624032 FAM218AQ96MZ4 157 aa8.1□□□□□ -1.11
ATRX-213ENST00000624032 TENM3Q9P273 2699 aa8.1□□□□□ -1.11
ATRX-213ENST00000624032 COX7CP15954 63 aa8.1□□□□□ -1.11
ATRX-213ENST00000624032 Q8NAQ8 132 aa8.09□□□□□ -1.11
ATRX-213ENST00000624032 SMIM9A6NGZ8 99 aa8.09□□□□□ -1.12
ATRX-213ENST00000624032 MALP21145 153 aa8.09□□□□□ -1.12
ATRX-213ENST00000624032 FAM19A3Q7Z5A8 133 aa8.09□□□□□ -1.12
ATRX-213ENST00000624032 DEFB130BP0DP73 79 aa8.08□□□□□ -1.12
ATRX-213ENST00000624032 DEFB130AP0DP74 79 aa8.08□□□□□ -1.12
ATRX-213ENST00000624032 TRAV13-1A0A0B4J241 112 aa8.08□□□□□ -1.12
ATRX-213ENST00000624032 ATOX1O00244 68 aa8.07□□□□□ -1.12
ATRX-213ENST00000624032 RS1O15537 224 aa8.07□□□□□ -1.12
ATRX-213ENST00000624032 Q9HAA7 133 aa8.07□□□□□ -1.12
ATRX-213ENST00000624032 TRAV13-2A0A0B4J235 113 aa8.07□□□□□ -1.12
ATRX-213ENST00000624032 RPL28P46779 137 aaKnown RBP8.07□□□□□ -1.12
ATRX-213ENST00000624032 CELA1Q9UNI1 258 aa8.07□□□□□ -1.12
ATRX-213ENST00000624032 TRGV2A0A075B6R0 118 aa8.06□□□□□ -1.12
ATRX-213ENST00000624032 J3KT08 172 aa8.06□□□□□ -1.12
ATRX-213ENST00000624032 CRPP02741 224 aa8.06□□□□□ -1.12
ATRX-213ENST00000624032 MIFP14174 115 aa8.06□□□□□ -1.12
ATRX-213ENST00000624032 HIST1H4AP62805 103 aaKnown RBP8.06□□□□□ -1.12
ATRX-213ENST00000624032 KLK5Q9Y337 293 aaPredicted RBP8.06□□□□□ -1.12
ATRX-213ENST00000624032 CRYGAP11844 174 aa8.06□□□□□ -1.12
ATRX-213ENST00000624032 C2orf48Q96LS8 159 aa8.06□□□□□ -1.12
ATRX-213ENST00000624032 A0A1B0GX51 115 aa8.06□□□□□ -1.12
ATRX-213ENST00000624032 DNAL4O96015 105 aa8.06□□□□□ -1.12
ATRX-213ENST00000624032 CSDC2Q9Y534 153 aaKnown RBP8.06□□□□□ -1.12
ATRX-213ENST00000624032 LOC107984640A0A0U1RRK4 108 aa8.05□□□□□ -1.12
ATRX-213ENST00000624032 F5H768 121 aa8.05□□□□□ -1.12
ATRX-213ENST00000624032 RPL36AP83881 106 aaKnown RBP8.03□□□□□ -1.12
ATRX-213ENST00000624032 RPL18AQ02543 176 aaKnown RBP8.03□□□□□ -1.12
ATRX-213ENST00000624032 LINC00612Q8N6U2 182 aa8.03□□□□□ -1.12
ATRX-213ENST00000624032 RPL36ALQ969Q0 106 aaKnown RBP8.03□□□□□ -1.12
ATRX-213ENST00000624032 TM2D3Q9BRN9 247 aa8.03□□□□□ -1.12
ATRX-213ENST00000624032 LINC00337Q8N6G1 96 aa8.02□□□□□ -1.13
ATRX-213ENST00000624032 CDC42SE2Q9NRR3 84 aa8.02□□□□□ -1.13
ATRX-213ENST00000624032 A0A0J9YWU9 116 aa8.02□□□□□ -1.13
ATRX-213ENST00000624032 hADV29S1A0JD25 119 aa8.02□□□□□ -1.13
ATRX-213ENST00000624032 SND1-IT1Q9HBX3 110 aa8.02□□□□□ -1.13
ATRX-213ENST00000624032 C14orf132Q9NPU4 83 aa8.02□□□□□ -1.13
ATRX-213ENST00000624032 LYRM9A8MSI8 78 aa8.01□□□□□ -1.13
ATRX-213ENST00000624032 MIR7-3HGQ8N6C7 128 aa8.01□□□□□ -1.13
ATRX-213ENST00000624032 A0A087WYN8 130 aa8.01□□□□□ -1.13
ATRX-213ENST00000624032 DAD1P61803 113 aa8.01□□□□□ -1.13
ATRX-213ENST00000624032 RPS28P62857 69 aaKnown RBP8.01□□□□□ -1.13
ATRX-213ENST00000624032 Q6JHZ5 121 aa8.01□□□□□ -1.13
ATRX-213ENST00000624032 NTM-AS1Q6ZSK4 140 aa8.01□□□□□ -1.13
ATRX-213ENST00000624032 MEGF8Q7Z7M0 2845 aa8.01□□□□□ -1.13
ATRX-213ENST00000624032 IGKV2-28A0A075B6P5 120 aa8.01□□□□□ -1.13
ATRX-213ENST00000624032 H0YGX0 51 aa8.01□□□□□ -1.13
ATRX-213ENST00000624032 IGKV2D-28P01615 120 aa8.01□□□□□ -1.13
ATRX-213ENST00000624032 SPART-AS1P0CW21 52 aa8.01□□□□□ -1.13
ATRX-213ENST00000624032 FAM19A5Q7Z5A7 132 aaPredicted RBP8.01□□□□□ -1.13
ATRX-213ENST00000624032 HUWE1Q7Z6Z7 4374 aaKnown RBP8.01□□□□□ -1.13
ATRX-213ENST00000624032 TRGV4A0A0C4DH28 118 aa8□□□□□ -1.13
ATRX-213ENST00000624032 IGKV3D-7A0A0C4DH55 119 aa8□□□□□ -1.13
ATRX-213ENST00000624032 TRBV10-1A0A0K0K1A3 114 aa8□□□□□ -1.13
ATRX-213ENST00000624032 FHL2Q14192 279 aa8□□□□□ -1.13
ATRX-213ENST00000624032 SMIM11BQ8TCY0 68 aa8□□□□□ -1.13
ATRX-213ENST00000624032 K7EQD1 137 aa8□□□□□ -1.13
ATRX-213ENST00000624032 LOC100131303A0A0U1RQF7 123 aa7.99□□□□□ -1.13
ATRX-213ENST00000624032 HTN3P15516 51 aa7.99□□□□□ -1.13
ATRX-213ENST00000624032 C5orf47Q569G3 176 aa7.99□□□□□ -1.13
ATRX-213ENST00000624032 C9orf129Q5T035 196 aaKnown RBP7.99□□□□□ -1.13
ATRX-213ENST00000624032 COX7B2Q8TF08 81 aa7.99□□□□□ -1.13
ATRX-213ENST00000624032 COL7A1Q02388 2944 aa7.99□□□□□ -1.13
ATRX-213ENST00000624032 OBSCN-AS1Q96MR7 158 aa7.99□□□□□ -1.13
ATRX-213ENST00000624032 LINC00846Q9NV44 126 aa7.99□□□□□ -1.13
ATRX-213ENST00000624032 UBE2L6O14933 153 aa7.99□□□□□ -1.13
ATRX-213ENST00000624032 SERP2Q8N6R1 65 aa7.99□□□□□ -1.13
ATRX-213ENST00000624032 DNAH9Q9NYC9 4486 aa7.98□□□□□ -1.13
ATRX-213ENST00000624032 LINC00158P58513 81 aa7.98□□□□□ -1.13
ATRX-213ENST00000624032 TOMM7Q9P0U1 55 aa7.98□□□□□ -1.13
ATRX-213ENST00000624032 NANOS2P60321 138 aaKnown RBP7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms