RNA–Protein interactions for RNA: ENST00000623391.1

AP000542.3-201, humanhuman

BASIC

Gene AP000542.3, Length 6,114 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000542.3-201ENST00000623391 IGLV9-49A0A0B4J1Y8 123 aa6.15□□□□□ -1.42
AP000542.3-201ENST00000623391 BCE1O60756 84 aa6.15□□□□□ -1.42
AP000542.3-201ENST00000623391 LRCOL1A6NCL2 159 aa6.15□□□□□ -1.42
AP000542.3-201ENST00000623391 Q9BRP9 147 aa6.15□□□□□ -1.42
AP000542.3-201ENST00000623391 ABCA1O95477 2261 aa6.14□□□□□ -1.43
AP000542.3-201ENST00000623391 Q8NAQ8 132 aa6.14□□□□□ -1.43
AP000542.3-201ENST00000623391 LINC00337Q8N6G1 96 aa6.14□□□□□ -1.43
AP000542.3-201ENST00000623391 LIMD2Q9BT23 127 aa6.14□□□□□ -1.43
AP000542.3-201ENST00000623391 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.14□□□□□ -1.43
AP000542.3-201ENST00000623391 ESRGQ1W209 222 aa6.13□□□□□ -1.43
AP000542.3-201ENST00000623391 TET2Q6N021 2002 aaPredicted RBP6.13□□□□□ -1.43
AP000542.3-201ENST00000623391 C22orf24Q9Y442 160 aa6.13□□□□□ -1.43
AP000542.3-201ENST00000623391 TRBV7-7A0A0K0K1E9 115 aa6.12□□□□□ -1.43
AP000542.3-201ENST00000623391 WFDC13Q8IUB5 93 aa6.12□□□□□ -1.43
AP000542.3-201ENST00000623391 PRR3P79522 188 aaKnown RBP6.12□□□□□ -1.43
AP000542.3-201ENST00000623391 KRTAP24-1Q3LI83 254 aa6.12□□□□□ -1.43
AP000542.3-201ENST00000623391 ELOF1P60002 83 aaKnown RBP6.11□□□□□ -1.43
AP000542.3-201ENST00000623391 Q8N9L7 120 aa6.11□□□□□ -1.43
AP000542.3-201ENST00000623391 C6orf48Q9UBA6 75 aa6.11□□□□□ -1.43
AP000542.3-201ENST00000623391 SERP1Q9Y6X1 66 aa6.1□□□□□ -1.43
AP000542.3-201ENST00000623391 LOC110117498A0A087WWA1 95 aa6.1□□□□□ -1.43
AP000542.3-201ENST00000623391 MDFIQ99750 246 aa6.1□□□□□ -1.43
AP000542.3-201ENST00000623391 HRCT1Q6UXD1 115 aa6.09□□□□□ -1.43
AP000542.3-201ENST00000623391 SPTAN1Q13813 2472 aaKnown RBP6.09□□□□□ -1.43
AP000542.3-201ENST00000623391 Q6ZVQ6 151 aa6.09□□□□□ -1.43
AP000542.3-201ENST00000623391 FAM30AQ9NZY2 134 aa6.09□□□□□ -1.43
AP000542.3-201ENST00000623391 K7ERS5 55 aa6.09□□□□□ -1.43
AP000542.3-201ENST00000623391 CSNK1G2-AS1Q8NCQ2 148 aa6.09□□□□□ -1.43
AP000542.3-201ENST00000623391 DNAH10OSP0CZ25 163 aa6.08□□□□□ -1.44
AP000542.3-201ENST00000623391 SPINK6Q6UWN8 80 aa6.08□□□□□ -1.44
AP000542.3-201ENST00000623391 SMCR5Q8TEV8 140 aa6.08□□□□□ -1.44
AP000542.3-201ENST00000623391 CCDC179H3BU77 68 aa6.08□□□□□ -1.44
AP000542.3-201ENST00000623391 LINC00612Q8N6U2 182 aa6.07□□□□□ -1.44
AP000542.3-201ENST00000623391 HCG22E2RYF7 251 aa6.07□□□□□ -1.44
AP000542.3-201ENST00000623391 SMIM26A0A096LP01 95 aa6.07□□□□□ -1.44
AP000542.3-201ENST00000623391 C16orf90A8MZG2 172 aa6.07□□□□□ -1.44
AP000542.3-201ENST00000623391 SNURFQ9Y675 71 aa6.07□□□□□ -1.44
AP000542.3-201ENST00000623391 LINC01547P58512 204 aaPredicted RBP6.07□□□□□ -1.44
AP000542.3-201ENST00000623391 C19orf73Q9NVV2 129 aa6.06□□□□□ -1.44
AP000542.3-201ENST00000623391 CIRBP-AS1Q8TBR5 109 aa6.06□□□□□ -1.44
AP000542.3-201ENST00000623391 ARHGAP32A7KAX9 2087 aa6.06□□□□□ -1.44
AP000542.3-201ENST00000623391 LINC00167Q96N53 147 aa6.06□□□□□ -1.44
AP000542.3-201ENST00000623391 NBDYA0A0U1RRE5 68 aa6.05□□□□□ -1.44
AP000542.3-201ENST00000623391 hDV103S1A0JD37 113 aa6.05□□□□□ -1.44
AP000542.3-201ENST00000623391 Q8N3U1 123 aa6.05□□□□□ -1.44
AP000542.3-201ENST00000623391 PLXNB1O43157 2135 aa6.05□□□□□ -1.44
AP000542.3-201ENST00000623391 BRK1Q8WUW1 75 aa6.05□□□□□ -1.44
AP000542.3-201ENST00000623391 TP53AIP1Q9HCN2 124 aa6.05□□□□□ -1.44
AP000542.3-201ENST00000623391 LINC00846Q9NV44 126 aa6.05□□□□□ -1.44
AP000542.3-201ENST00000623391 FAM208BQ5VWN6 2430 aa6.04□□□□□ -1.44
AP000542.3-201ENST00000623391 Q6ZRX8 168 aa6.04□□□□□ -1.44
AP000542.3-201ENST00000623391 LITAFQ99732 161 aa6.04□□□□□ -1.44
AP000542.3-201ENST00000623391 NBASA2RRP1 2371 aa6.04□□□□□ -1.44
AP000542.3-201ENST00000623391 PRO0461Q9UI25 63 aa6.04□□□□□ -1.44
AP000542.3-201ENST00000623391 A0A087WSZ3 146 aa6.04□□□□□ -1.44
AP000542.3-201ENST00000623391 TTC28Q96AY4 2481 aa6.04□□□□□ -1.44
AP000542.3-201ENST00000623391 NAV3Q8IVL0 2385 aa6.04□□□□□ -1.44
AP000542.3-201ENST00000623391 SPATA3Q8NHX4 192 aa6.04□□□□□ -1.44
AP000542.3-201ENST00000623391 KIAA0087Q14695 138 aa6.03□□□□□ -1.44
AP000542.3-201ENST00000623391 SOSTDC1Q6X4U4 206 aa6.03□□□□□ -1.44
AP000542.3-201ENST00000623391 LINC00588Q9Y4M8 146 aa6.03□□□□□ -1.44
AP000542.3-201ENST00000623391 H3BPC8 53 aa6.03□□□□□ -1.44
AP000542.3-201ENST00000623391 CDIP1Q9H305 208 aa6.03□□□□□ -1.44
AP000542.3-201ENST00000623391 IGHV6-1A0A0B4J1U7 121 aa6.03□□□□□ -1.44
AP000542.3-201ENST00000623391 MPLKIPQ8TAP9 179 aa6.02□□□□□ -1.45
AP000542.3-201ENST00000623391 IGLV6-57P01721 117 aa6.02□□□□□ -1.45
AP000542.3-201ENST00000623391 Q8NBF4 154 aa6.02□□□□□ -1.45
AP000542.3-201ENST00000623391 Q6ZQT0 140 aa6.01□□□□□ -1.45
AP000542.3-201ENST00000623391 H0Y9P7 68 aa6.01□□□□□ -1.45
AP000542.3-201ENST00000623391 PRLHP81277 87 aa6.01□□□□□ -1.45
AP000542.3-201ENST00000623391 MED13LQ71F56 2210 aa6.01□□□□□ -1.45
AP000542.3-201ENST00000623391 LINC00208Q96KT6 92 aa6.01□□□□□ -1.45
AP000542.3-201ENST00000623391 PLA2G2DQ9UNK4 145 aa6.01□□□□□ -1.45
AP000542.3-201ENST00000623391 SMCPP49901 116 aaPredicted RBP6□□□□□ -1.45
AP000542.3-201ENST00000623391 PRR34Q9NV39 138 aa6□□□□□ -1.45
AP000542.3-201ENST00000623391 PRRC2AP48634 2157 aaKnown RBP6□□□□□ -1.45
AP000542.3-201ENST00000623391 A0A087WVE0 104 aa6□□□□□ -1.45
AP000542.3-201ENST00000623391 RTL8CO15255 209 aa6□□□□□ -1.45
AP000542.3-201ENST00000623391 KRTAP1-3Q8IUG1 177 aa6□□□□□ -1.45
AP000542.3-201ENST00000623391 Q6ZRP5 223 aa5.99□□□□□ -1.45
AP000542.3-201ENST00000623391 TMEM254Q8TBM7 123 aa5.99□□□□□ -1.45
AP000542.3-201ENST00000623391 FAM218AQ96MZ4 157 aa5.99□□□□□ -1.45
AP000542.3-201ENST00000623391 VPREB1P12018 145 aa5.98□□□□□ -1.45
AP000542.3-201ENST00000623391 TLX1NBP0CAT3 122 aa5.98□□□□□ -1.45
AP000542.3-201ENST00000623391 WWC2-AS2Q96NR7 200 aa5.98□□□□□ -1.45
AP000542.3-201ENST00000623391 CUL9Q8IWT3 2517 aa5.97□□□□□ -1.45
AP000542.3-201ENST00000623391 Q9UF83 564 aa5.97□□□□□ -1.45
AP000542.3-201ENST00000623391 CREBBPQ92793 2442 aa5.97□□□□□ -1.45
AP000542.3-201ENST00000623391 TRBV7-4A0A0J9YYF1 115 aa5.97□□□□□ -1.45
AP000542.3-201ENST00000623391 KCNQ1DNQ9H478 68 aa5.97□□□□□ -1.45
AP000542.3-201ENST00000623391 GIG44P09565 113 aaPredicted RBP5.96□□□□□ -1.45
AP000542.3-201ENST00000623391 CRYGAP11844 174 aa5.96□□□□□ -1.46
AP000542.3-201ENST00000623391 KRTAP10-11P60412 298 aa5.96□□□□□ -1.46
AP000542.3-201ENST00000623391 KRTAP10-3P60369 221 aa5.96□□□□□ -1.46
AP000542.3-201ENST00000623391 ACACBO00763 2458 aa5.95□□□□□ -1.46
AP000542.3-201ENST00000623391 IGLV1-50A0A075B6I6 118 aa5.95□□□□□ -1.46
AP000542.3-201ENST00000623391 A6NED7 52 aa5.95□□□□□ -1.46
AP000542.3-201ENST00000623391 AGRNO00468 2067 aa5.95□□□□□ -1.46
AP000542.3-201ENST00000623391 EPM2AB3EWF7 344 aa5.95□□□□□ -1.46
AP000542.3-201ENST00000623391 LINC00476Q8WZB0 136 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms