RNA–Protein interactions for RNA: ENST00000621999.4

SCAMP1-207, Transcript of secretory carrier membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP1, Length 4,509 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-207ENST00000621999 LINC01546A6NGU7 62 aa8.55□□□□□ -1.04
SCAMP1-207ENST00000621999 FABP2P12104 132 aa8.55□□□□□ -1.04
SCAMP1-207ENST00000621999 H3BUT2 72 aa8.55□□□□□ -1.04
SCAMP1-207ENST00000621999 AKAP9Q99996 3911 aa8.55□□□□□ -1.04
SCAMP1-207ENST00000621999 A0A087WZ39 114 aa8.54□□□□□ -1.04
SCAMP1-207ENST00000621999 A0A0J9YXY3 114 aa8.54□□□□□ -1.04
SCAMP1-207ENST00000621999 SMIM1B2RUZ4 78 aa8.54□□□□□ -1.04
SCAMP1-207ENST00000621999 MUSTN1Q8IVN3 82 aa8.54□□□□□ -1.04
SCAMP1-207ENST00000621999 XAGE1AQ9HD64 81 aa8.54□□□□□ -1.04
SCAMP1-207ENST00000621999 USP17L23D6RBM5 183 aa8.53□□□□□ -1.04
SCAMP1-207ENST00000621999 UNQ6190/PRO20217Q6UXQ8 127 aa8.53□□□□□ -1.04
SCAMP1-207ENST00000621999 CARD19Q96LW7 228 aa8.53□□□□□ -1.04
SCAMP1-207ENST00000621999 SND1-IT1Q9HBX3 110 aa8.53□□□□□ -1.04
SCAMP1-207ENST00000621999 GAGE10A6NGK3 116 aa8.53□□□□□ -1.04
SCAMP1-207ENST00000621999 C1orf134Q5TEV5 83 aa8.53□□□□□ -1.04
SCAMP1-207ENST00000621999 CEND1Q8N111 149 aa8.52□□□□□ -1.05
SCAMP1-207ENST00000621999 DNAL4O96015 105 aa8.52□□□□□ -1.05
SCAMP1-207ENST00000621999 UBE2BP63146 152 aa8.52□□□□□ -1.05
SCAMP1-207ENST00000621999 PGPEP1Q9NXJ5 209 aa8.52□□□□□ -1.05
SCAMP1-207ENST00000621999 C6orf223Q8N319 242 aa8.51□□□□□ -1.05
SCAMP1-207ENST00000621999 GTF2H5Q6ZYL4 71 aa8.51□□□□□ -1.05
SCAMP1-207ENST00000621999 A4D1N5 150 aa8.51□□□□□ -1.05
SCAMP1-207ENST00000621999 C9orf116Q5BN46 136 aaPredicted RBP8.51□□□□□ -1.05
SCAMP1-207ENST00000621999 ENHOQ6UWT2 76 aa8.51□□□□□ -1.05
SCAMP1-207ENST00000621999 IGHV3OR16-9A0A0B4J2B5 98 aa8.5□□□□□ -1.05
SCAMP1-207ENST00000621999 K7ERJ3 54 aa8.5□□□□□ -1.05
SCAMP1-207ENST00000621999 BVES-AS1Q5T3Y7 98 aa8.5□□□□□ -1.05
SCAMP1-207ENST00000621999 NBDYA0A0U1RRE5 68 aa8.5□□□□□ -1.05
SCAMP1-207ENST00000621999 TENM3Q9P273 2699 aa8.5□□□□□ -1.05
SCAMP1-207ENST00000621999 APLNQ9ULZ1 77 aa8.5□□□□□ -1.05
SCAMP1-207ENST00000621999 Q8IZM0 81 aa8.49□□□□□ -1.05
SCAMP1-207ENST00000621999 TRRAPQ9Y4A5 3859 aa8.49□□□□□ -1.05
SCAMP1-207ENST00000621999 TSPEAR-AS2P59090 65 aa8.49□□□□□ -1.05
SCAMP1-207ENST00000621999 DNAH10OSP0CZ25 163 aa8.48□□□□□ -1.05
SCAMP1-207ENST00000621999 TAL2Q16559 108 aa8.48□□□□□ -1.05
SCAMP1-207ENST00000621999 IBA57-AS1B1ANH7 110 aa8.48□□□□□ -1.05
SCAMP1-207ENST00000621999 IFITM1P13164 125 aa8.48□□□□□ -1.05
SCAMP1-207ENST00000621999 RPL13AP40429 203 aaKnown RBP8.48□□□□□ -1.05
SCAMP1-207ENST00000621999 NCR3O14931 201 aa8.48□□□□□ -1.05
SCAMP1-207ENST00000621999 SLC25A20O43772 301 aa8.48□□□□□ -1.05
SCAMP1-207ENST00000621999 DLEU1O43261 78 aa8.48□□□□□ -1.05
SCAMP1-207ENST00000621999 FXYD2P54710 66 aa8.48□□□□□ -1.05
SCAMP1-207ENST00000621999 SNHG12Q9BXW3 62 aa8.48□□□□□ -1.05
SCAMP1-207ENST00000621999 C3orf84H3BNL1 204 aa8.47□□□□□ -1.05
SCAMP1-207ENST00000621999 PRO1854Q9UHT4 67 aa8.47□□□□□ -1.05
SCAMP1-207ENST00000621999 HIGD1BQ9P298 99 aa8.46□□□□□ -1.05
SCAMP1-207ENST00000621999 SPCS1Q9Y6A9 102 aa8.46□□□□□ -1.06
SCAMP1-207ENST00000621999 K7EP13 123 aa8.46□□□□□ -1.06
SCAMP1-207ENST00000621999 Q6ZVH6 145 aa8.46□□□□□ -1.06
SCAMP1-207ENST00000621999 TRAV13-2A0A0B4J235 113 aa8.45□□□□□ -1.06
SCAMP1-207ENST00000621999 A0A1B0GV90 55 aa8.45□□□□□ -1.06
SCAMP1-207ENST00000621999 LBHQ53QV2 105 aaPredicted RBP8.45□□□□□ -1.06
SCAMP1-207ENST00000621999 PKIGQ9Y2B9 76 aa8.45□□□□□ -1.06
SCAMP1-207ENST00000621999 FOXI1Q12951 378 aa8.43□□□□□ -1.06
SCAMP1-207ENST00000621999 FAM19A5Q7Z5A7 132 aaPredicted RBP8.43□□□□□ -1.06
SCAMP1-207ENST00000621999 LINC00308Q8TCZ7 52 aa8.43□□□□□ -1.06
SCAMP1-207ENST00000621999 Q6ZRU5 148 aa8.42□□□□□ -1.06
SCAMP1-207ENST00000621999 CBY1Q9Y3M2 126 aa8.41□□□□□ -1.06
SCAMP1-207ENST00000621999 CASC10Q5T4H9 136 aa8.41□□□□□ -1.06
SCAMP1-207ENST00000621999 CFC1BP0CG36 223 aa8.41□□□□□ -1.06
SCAMP1-207ENST00000621999 CFC1P0CG37 223 aa8.41□□□□□ -1.06
SCAMP1-207ENST00000621999 SPANXCQ9NY87 97 aa8.41□□□□□ -1.06
SCAMP1-207ENST00000621999 IGLV5-52A0A0A0MRZ9 124 aa8.4□□□□□ -1.06
SCAMP1-207ENST00000621999 LOC107984640A0A0U1RRK4 108 aa8.4□□□□□ -1.07
SCAMP1-207ENST00000621999 A0A1B0GV72 72 aa8.4□□□□□ -1.07
SCAMP1-207ENST00000621999 PRR34Q9NV39 138 aa8.4□□□□□ -1.07
SCAMP1-207ENST00000621999 C2orf91Q6ZV80 131 aa8.39□□□□□ -1.07
SCAMP1-207ENST00000621999 IGLV5-39A0A0G2JS06 123 aa8.39□□□□□ -1.07
SCAMP1-207ENST00000621999 IGLV5-45A0A087WSX0 123 aa8.39□□□□□ -1.07
SCAMP1-207ENST00000621999 TGP01266 2768 aa8.38□□□□□ -1.07
SCAMP1-207ENST00000621999 LINC01620Q4KN68 170 aa8.38□□□□□ -1.07
SCAMP1-207ENST00000621999 ADAMTSL4-AS1Q5T5F5 129 aa8.38□□□□□ -1.07
SCAMP1-207ENST00000621999 C10orf25Q5T742 122 aa8.38□□□□□ -1.07
SCAMP1-207ENST00000621999 ETDCA0A1B0GVM5 59 aa8.38□□□□□ -1.07
SCAMP1-207ENST00000621999 TRBV30A0A0K0K1B3 111 aa8.38□□□□□ -1.07
SCAMP1-207ENST00000621999 C2orf48Q96LS8 159 aa8.37□□□□□ -1.07
SCAMP1-207ENST00000621999 UPK3BQ9BT76 320 aa8.37□□□□□ -1.07
SCAMP1-207ENST00000621999 TMEM126AQ9H061 195 aa8.37□□□□□ -1.07
SCAMP1-207ENST00000621999 IGKV2-28A0A075B6P5 120 aa8.36□□□□□ -1.07
SCAMP1-207ENST00000621999 IGKV2D-28P01615 120 aa8.36□□□□□ -1.07
SCAMP1-207ENST00000621999 PRR3P79522 188 aaKnown RBP8.36□□□□□ -1.07
SCAMP1-207ENST00000621999 LINC01561Q8N1V8 128 aa8.36□□□□□ -1.07
SCAMP1-207ENST00000621999 SPANXB1Q9NS25 103 aaPredicted RBP8.36□□□□□ -1.07
SCAMP1-207ENST00000621999 TIMM17BO60830 172 aa8.36□□□□□ -1.07
SCAMP1-207ENST00000621999 COX17Q14061 63 aa8.36□□□□□ -1.07
SCAMP1-207ENST00000621999 A0A1B0GWB2 263 aa8.35□□□□□ -1.07
SCAMP1-207ENST00000621999 C9orf118A6NHY6 69 aa8.35□□□□□ -1.07
SCAMP1-207ENST00000621999 NDUFC2-KCTD14E9PQ53 114 aa8.35□□□□□ -1.07
SCAMP1-207ENST00000621999 MTURNQ8N3F0 131 aa8.35□□□□□ -1.07
SCAMP1-207ENST00000621999 NTN5Q8WTR8 489 aaPredicted RBP8.35□□□□□ -1.07
SCAMP1-207ENST00000621999 RPL37AP8A6NKH3 93 aa8.34□□□□□ -1.07
SCAMP1-207ENST00000621999 LINC00476Q8WZB0 136 aa8.34□□□□□ -1.07
SCAMP1-207ENST00000621999 SPANXDQ9BXN6 97 aa8.33□□□□□ -1.08
SCAMP1-207ENST00000621999 C6orf48Q9UBA6 75 aa8.33□□□□□ -1.08
SCAMP1-207ENST00000621999 ATXN8Q156A1 80 aa8.33□□□□□ -1.08
SCAMP1-207ENST00000621999 C9JAW5 83 aa8.32□□□□□ -1.08
SCAMP1-207ENST00000621999 J3QR89 54 aa8.32□□□□□ -1.08
SCAMP1-207ENST00000621999 UBE2AP49459 152 aa8.32□□□□□ -1.08
SCAMP1-207ENST00000621999 DEFB105AQ8NG35 78 aa8.32□□□□□ -1.08
SCAMP1-207ENST00000621999 LAMTOR3Q9UHA4 124 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms