RNA–Protein interactions for RNA: ENST00000621245.4

CPNE3-210, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-210ENST00000621245 F8WDY8 70 aa6.87□□□□□ -1.31
CPNE3-210ENST00000621245 RAB5AP20339 215 aa6.87□□□□□ -1.31
CPNE3-210ENST00000621245 LINC00469Q8N7U9 141 aa6.87□□□□□ -1.31
CPNE3-210ENST00000621245 DIRC1Q969H9 104 aa6.87□□□□□ -1.31
CPNE3-210ENST00000621245 MAP1LC3AQ9H492 121 aa6.87□□□□□ -1.31
CPNE3-210ENST00000621245 NDUFC2-KCTD14E9PQ53 114 aa6.86□□□□□ -1.31
CPNE3-210ENST00000621245 C2orf66Q6UXQ4 117 aa6.86□□□□□ -1.31
CPNE3-210ENST00000621245 TEX43Q6ZNM6 134 aa6.86□□□□□ -1.31
CPNE3-210ENST00000621245 Q8N8P6 123 aa6.86□□□□□ -1.31
CPNE3-210ENST00000621245 AMELXQ99217 191 aa6.86□□□□□ -1.31
CPNE3-210ENST00000621245 TRBV30A0A0K0K1B3 111 aa6.85□□□□□ -1.31
CPNE3-210ENST00000621245 IGIPA6NJ69 53 aa6.85□□□□□ -1.31
CPNE3-210ENST00000621245 UBE2BP63146 152 aa6.85□□□□□ -1.31
CPNE3-210ENST00000621245 TOMM7Q9P0U1 55 aa6.85□□□□□ -1.31
CPNE3-210ENST00000621245 CYSLTR1Q9Y271 337 aa6.85□□□□□ -1.31
CPNE3-210ENST00000621245 FAT4Q6V0I7 4981 aa6.85□□□□□ -1.31
CPNE3-210ENST00000621245 XAGE1AQ9HD64 81 aa6.84□□□□□ -1.31
CPNE3-210ENST00000621245 LINC01561Q8N1V8 128 aa6.83□□□□□ -1.32
CPNE3-210ENST00000621245 C2orf88Q9BSF0 95 aa6.83□□□□□ -1.32
CPNE3-210ENST00000621245 CDKN2A-AS1Q9UH64 79 aa6.83□□□□□ -1.32
CPNE3-210ENST00000621245 LAMTOR2Q9Y2Q5 125 aa6.83□□□□□ -1.32
CPNE3-210ENST00000621245 ADCYAP1P18509 176 aa6.82□□□□□ -1.32
CPNE3-210ENST00000621245 KIAA1644Q3SXP7 199 aa6.82□□□□□ -1.32
CPNE3-210ENST00000621245 FAM19A3Q7Z5A8 133 aa6.82□□□□□ -1.32
CPNE3-210ENST00000621245 PACRGQ96M98 296 aaPredicted RBP6.82□□□□□ -1.32
CPNE3-210ENST00000621245 Q6ZN92 141 aa6.81□□□□□ -1.32
CPNE3-210ENST00000621245 VCX2Q9H322 139 aa6.81□□□□□ -1.32
CPNE3-210ENST00000621245 C22orf24Q9Y442 160 aa6.81□□□□□ -1.32
CPNE3-210ENST00000621245 IGLV1-50A0A075B6I6 118 aa6.8□□□□□ -1.32
CPNE3-210ENST00000621245 MT-ND4LP03901 98 aa6.8□□□□□ -1.32
CPNE3-210ENST00000621245 PRSS2P07478 247 aa6.8□□□□□ -1.32
CPNE3-210ENST00000621245 PNRC1Q12796 327 aaPredicted RBP6.8□□□□□ -1.32
CPNE3-210ENST00000621245 ORMDL2Q53FV1 153 aa6.8□□□□□ -1.32
CPNE3-210ENST00000621245 Q8IZM0 81 aa6.8□□□□□ -1.32
CPNE3-210ENST00000621245 ALKBH7Q9BT30 221 aaPredicted RBP6.8□□□□□ -1.32
CPNE3-210ENST00000621245 CKS1BP61024 79 aa6.79□□□□□ -1.32
CPNE3-210ENST00000621245 A0A087X002 238 aa6.78□□□□□ -1.32
CPNE3-210ENST00000621245 SMIM1B2RUZ4 78 aa6.78□□□□□ -1.32
CPNE3-210ENST00000621245 ZNF861PO60384 105 aa6.78□□□□□ -1.32
CPNE3-210ENST00000621245 C6orf226Q5I0X4 101 aa6.78□□□□□ -1.32
CPNE3-210ENST00000621245 TOMM6Q96B49 74 aa6.78□□□□□ -1.32
CPNE3-210ENST00000621245 NXT2Q9NPJ8 142 aaKnown RBP6.78□□□□□ -1.32
CPNE3-210ENST00000621245 HERVK_113P63121 156 aa6.77□□□□□ -1.33
CPNE3-210ENST00000621245 TIMM17AQ99595 171 aa6.77□□□□□ -1.33
CPNE3-210ENST00000621245 KRTAP9-2Q9BYQ4 174 aa6.77□□□□□ -1.33
CPNE3-210ENST00000621245 KRTAP9-6A0A140TA67 174 aa6.76□□□□□ -1.33
CPNE3-210ENST00000621245 F8VRH5 84 aa6.76□□□□□ -1.33
CPNE3-210ENST00000621245 SCO1O75880 301 aa6.76□□□□□ -1.33
CPNE3-210ENST00000621245 PRR4Q16378 134 aa6.76□□□□□ -1.33
CPNE3-210ENST00000621245 GEMIN7Q9H840 131 aaKnown RBP6.76□□□□□ -1.33
CPNE3-210ENST00000621245 RPL37AP8A6NKH3 93 aa6.75□□□□□ -1.33
CPNE3-210ENST00000621245 K7EMI3 77 aa6.75□□□□□ -1.33
CPNE3-210ENST00000621245 SPINK8P0C7L1 97 aa6.75□□□□□ -1.33
CPNE3-210ENST00000621245 MRPL55Q7Z7F7 128 aaKnown RBP6.75□□□□□ -1.33
CPNE3-210ENST00000621245 ANAPC11Q9NYG5 84 aa6.75□□□□□ -1.33
CPNE3-210ENST00000621245 IGLV5-45A0A087WSX0 123 aa6.74□□□□□ -1.33
CPNE3-210ENST00000621245 NUPR1O60356 82 aa6.74□□□□□ -1.33
CPNE3-210ENST00000621245 TSPAN13O95857 204 aa6.74□□□□□ -1.33
CPNE3-210ENST00000621245 ERASQ7Z444 233 aa6.74□□□□□ -1.33
CPNE3-210ENST00000621245 COX7B2Q8TF08 81 aa6.74□□□□□ -1.33
CPNE3-210ENST00000621245 LINC00167Q96N53 147 aa6.74□□□□□ -1.33
CPNE3-210ENST00000621245 SCGB3A1Q96QR1 104 aa6.74□□□□□ -1.33
CPNE3-210ENST00000621245 TINCRA0A1B0GVN0 87 aa6.73□□□□□ -1.33
CPNE3-210ENST00000621245 LINC01546A6NGU7 62 aa6.73□□□□□ -1.33
CPNE3-210ENST00000621245 BCE1O60756 84 aa6.73□□□□□ -1.33
CPNE3-210ENST00000621245 RPL13AP40429 203 aaKnown RBP6.73□□□□□ -1.33
CPNE3-210ENST00000621245 RAB5BP61020 215 aa6.73□□□□□ -1.33
CPNE3-210ENST00000621245 CLLU1Q5K131 121 aa6.73□□□□□ -1.33
CPNE3-210ENST00000621245 TP73-AS1Q9UF72 201 aa6.73□□□□□ -1.33
CPNE3-210ENST00000621245 RAB14P61106 215 aa6.72□□□□□ -1.33
CPNE3-210ENST00000621245 IFITM2Q01629 132 aa6.72□□□□□ -1.33
CPNE3-210ENST00000621245 KRTAP13-2Q52LG2 175 aa6.72□□□□□ -1.33
CPNE3-210ENST00000621245 LBHQ53QV2 105 aaPredicted RBP6.72□□□□□ -1.33
CPNE3-210ENST00000621245 KRTAP13-1Q8IUC0 172 aa6.72□□□□□ -1.33
CPNE3-210ENST00000621245 CST9LQ9H4G1 147 aa6.72□□□□□ -1.33
CPNE3-210ENST00000621245 CARHSP1Q9Y2V2 147 aaKnown RBP6.72□□□□□ -1.33
CPNE3-210ENST00000621245 A0A096LNJ9 63 aa6.71□□□□□ -1.34
CPNE3-210ENST00000621245 TMEM218A2RU14 115 aa6.71□□□□□ -1.34
CPNE3-210ENST00000621245 SEC11AP67812 179 aa6.71□□□□□ -1.34
CPNE3-210ENST00000621245 PDZD11Q5EBL8 140 aa6.71□□□□□ -1.34
CPNE3-210ENST00000621245 Q8NDZ9 215 aa6.71□□□□□ -1.34
CPNE3-210ENST00000621245 CXCL5P42830 114 aa6.7□□□□□ -1.34
CPNE3-210ENST00000621245 PAPPA-AS1Q5QFB9 102 aa6.7□□□□□ -1.34
CPNE3-210ENST00000621245 URB1-AS1Q96HZ7 61 aa6.7□□□□□ -1.34
CPNE3-210ENST00000621245 IGLV5-37A0A075B6J1 123 aa6.69□□□□□ -1.34
CPNE3-210ENST00000621245 RPL28P46779 137 aaKnown RBP6.69□□□□□ -1.34
CPNE3-210ENST00000621245 GNB1LQ9BYB4 327 aa6.69□□□□□ -1.34
CPNE3-210ENST00000621245 IGKV2-28A0A075B6P5 120 aa6.68□□□□□ -1.34
CPNE3-210ENST00000621245 TRAV9-1A0A075B6T8 112 aa6.68□□□□□ -1.34
CPNE3-210ENST00000621245 IGKV2D-28P01615 120 aa6.68□□□□□ -1.34
CPNE3-210ENST00000621245 PMVKQ15126 192 aa6.68□□□□□ -1.34
CPNE3-210ENST00000621245 RETNLBQ9BQ08 111 aa6.68□□□□□ -1.34
CPNE3-210ENST00000621245 IGLV5-39A0A0G2JS06 123 aa6.67□□□□□ -1.34
CPNE3-210ENST00000621245 TMEM238C9JI98 176 aa6.67□□□□□ -1.34
CPNE3-210ENST00000621245 ZNF22P17026 224 aaPredicted RBP6.67□□□□□ -1.34
CPNE3-210ENST00000621245 G0S2P27469 103 aa6.67□□□□□ -1.34
CPNE3-210ENST00000621245 PFN2P35080 140 aa6.67□□□□□ -1.34
CPNE3-210ENST00000621245 PRLHP81277 87 aa6.67□□□□□ -1.34
CPNE3-210ENST00000621245 PMCHL1Q16048 86 aa6.67□□□□□ -1.34
CPNE3-210ENST00000621245 TYMSOSQ8TAI1 123 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms