RNA–Protein interactions for RNA: ENST00000620424.1

SYNRG-228, Transcript of synergin gamma, humanhuman

TSL 3

Gene SYNRG, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNRG-228ENST00000620424 PDZD11Q5EBL8 140 aa5.91□□□□□ -1.46
SYNRG-228ENST00000620424 PAPPA-AS1Q5QFB9 102 aa5.91□□□□□ -1.46
SYNRG-228ENST00000620424 Q6ZRP5 223 aa5.91□□□□□ -1.46
SYNRG-228ENST00000620424 LINC01561Q8N1V8 128 aa5.91□□□□□ -1.46
SYNRG-228ENST00000620424 LINC00469Q8N7U9 141 aa5.91□□□□□ -1.46
SYNRG-228ENST00000620424 GEMIN7Q9H840 131 aaKnown RBP5.91□□□□□ -1.46
SYNRG-228ENST00000620424 LINC00474Q9P2X8 69 aa5.91□□□□□ -1.46
SYNRG-228ENST00000620424 TINCRA0A1B0GVN0 87 aa5.9□□□□□ -1.46
SYNRG-228ENST00000620424 SMIM1B2RUZ4 78 aa5.9□□□□□ -1.46
SYNRG-228ENST00000620424 PRR3P79522 188 aaKnown RBP5.9□□□□□ -1.46
SYNRG-228ENST00000620424 PMVKQ15126 192 aa5.9□□□□□ -1.46
SYNRG-228ENST00000620424 C7orf33Q8WU49 177 aa5.9□□□□□ -1.46
SYNRG-228ENST00000620424 PKIGQ9Y2B9 76 aa5.9□□□□□ -1.46
SYNRG-228ENST00000620424 PKHD1L1Q86WI1 4243 aa5.89□□□□□ -1.47
SYNRG-228ENST00000620424 IGLV5-45A0A087WSX0 123 aa5.89□□□□□ -1.47
SYNRG-228ENST00000620424 F8WDY8 70 aa5.89□□□□□ -1.47
SYNRG-228ENST00000620424 HBDP02042 147 aa5.89□□□□□ -1.47
SYNRG-228ENST00000620424 SPINK8P0C7L1 97 aa5.89□□□□□ -1.47
SYNRG-228ENST00000620424 NDUFA6P56556 154 aa5.89□□□□□ -1.47
SYNRG-228ENST00000620424 GAGE2EQ4V326 116 aa5.89□□□□□ -1.47
SYNRG-228ENST00000620424 PHF5AQ7RTV0 110 aaKnown RBP5.89□□□□□ -1.47
SYNRG-228ENST00000620424 KRTAP7-1Q8IUC3 87 aa5.89□□□□□ -1.47
SYNRG-228ENST00000620424 Q8IZM0 81 aa5.89□□□□□ -1.47
SYNRG-228ENST00000620424 GAGE2DQ9UEU5 116 aa5.89□□□□□ -1.47
SYNRG-228ENST00000620424 DMBT1Q9UGM3 2413 aaPredicted RBP5.88□□□□□ -1.47
SYNRG-228ENST00000620424 TRBV30A0A0K0K1B3 111 aa5.88□□□□□ -1.47
SYNRG-228ENST00000620424 LINC01549A6NIU2 74 aa5.88□□□□□ -1.47
SYNRG-228ENST00000620424 KRTAP29-1A8MX34 341 aaPredicted RBP5.88□□□□□ -1.47
SYNRG-228ENST00000620424 TRGC2P03986 189 aa5.88□□□□□ -1.47
SYNRG-228ENST00000620424 PRSS2P07478 247 aa5.88□□□□□ -1.47
SYNRG-228ENST00000620424 TLX1NBP0CAT3 122 aa5.88□□□□□ -1.47
SYNRG-228ENST00000620424 SEC11AP67812 179 aa5.88□□□□□ -1.47
SYNRG-228ENST00000620424 C6orf226Q5I0X4 101 aa5.88□□□□□ -1.47
SYNRG-228ENST00000620424 KRTAP11-1Q8IUC1 163 aa5.88□□□□□ -1.47
SYNRG-228ENST00000620424 PACRGQ96M98 296 aaPredicted RBP5.88□□□□□ -1.47
SYNRG-228ENST00000620424 KRTAP4-8Q9BYQ9 185 aa5.88□□□□□ -1.47
SYNRG-228ENST00000620424 COLCA2A8K830 154 aa5.87□□□□□ -1.47
SYNRG-228ENST00000620424 SCO1O75880 301 aa5.87□□□□□ -1.47
SYNRG-228ENST00000620424 IGLC3P0DOY3 106 aa5.87□□□□□ -1.47
SYNRG-228ENST00000620424 LINC00310P59036 64 aa5.87□□□□□ -1.47
SYNRG-228ENST00000620424 CKS1BP61024 79 aa5.87□□□□□ -1.47
SYNRG-228ENST00000620424 C9orf129Q5T035 196 aaKnown RBP5.87□□□□□ -1.47
SYNRG-228ENST00000620424 FAM19A5Q7Z5A7 132 aaPredicted RBP5.87□□□□□ -1.47
SYNRG-228ENST00000620424 NDUFC2-KCTD14E9PQ53 114 aa5.86□□□□□ -1.47
SYNRG-228ENST00000620424 ZNF22P17026 224 aaPredicted RBP5.86□□□□□ -1.47
SYNRG-228ENST00000620424 RAB5BP61020 215 aa5.86□□□□□ -1.47
SYNRG-228ENST00000620424 FAM19A2Q8N3H0 131 aa5.86□□□□□ -1.47
SYNRG-228ENST00000620424 COX7B2Q8TF08 81 aa5.86□□□□□ -1.47
SYNRG-228ENST00000620424 LRP1Q07954 4544 aaKnown RBP5.86□□□□□ -1.47
SYNRG-228ENST00000620424 C11orf86A6NJI1 115 aa5.85□□□□□ -1.47
SYNRG-228ENST00000620424 NUPR1O60356 82 aa5.85□□□□□ -1.47
SYNRG-228ENST00000620424 BAGE3Q86Y29 109 aa5.85□□□□□ -1.47
SYNRG-228ENST00000620424 CHCHD1Q96BP2 118 aaKnown RBP5.85□□□□□ -1.47
SYNRG-228ENST00000620424 XAGE1AQ9HD64 81 aa5.85□□□□□ -1.47
SYNRG-228ENST00000620424 IGLV5-39A0A0G2JS06 123 aa5.84□□□□□ -1.47
SYNRG-228ENST00000620424 F8VRH5 84 aa5.84□□□□□ -1.47
SYNRG-228ENST00000620424 ATP5LO75964 103 aa5.84□□□□□ -1.47
SYNRG-228ENST00000620424 PSORS1C2Q9UIG4 136 aa5.84□□□□□ -1.47
SYNRG-228ENST00000620424 SERF1AO75920 110 aa5.83□□□□□ -1.48
SYNRG-228ENST00000620424 OXTP01178 125 aa5.83□□□□□ -1.48
SYNRG-228ENST00000620424 MT1HL1P0DM35 61 aa5.83□□□□□ -1.48
SYNRG-228ENST00000620424 SERTAD4-AS1Q5TG53 156 aa5.83□□□□□ -1.48
SYNRG-228ENST00000620424 IFI27L1Q96BM0 104 aa5.83□□□□□ -1.48
SYNRG-228ENST00000620424 CHTOPQ9Y3Y2 248 aaKnown RBP5.83□□□□□ -1.48
SYNRG-228ENST00000620424 FAT3Q8TDW7 4589 aa5.83□□□□□ -1.48
SYNRG-228ENST00000620424 H3BRM9 83 aa5.82□□□□□ -1.48
SYNRG-228ENST00000620424 M0QXV9 152 aa5.82□□□□□ -1.48
SYNRG-228ENST00000620424 HSBP1O75506 76 aa5.82□□□□□ -1.48
SYNRG-228ENST00000620424 SRSF9Q13242 221 aaKnown RBP eCLIP5.82□□□□□ -1.48
SYNRG-228ENST00000620424 HERC1Q15751 4861 aa5.82□□□□□ -1.48
SYNRG-228ENST00000620424 CXCL5P42830 114 aa5.81□□□□□ -1.48
SYNRG-228ENST00000620424 C1orf137Q5JT78 98 aa5.81□□□□□ -1.48
SYNRG-228ENST00000620424 TMEM170BQ5T4T1 132 aa5.81□□□□□ -1.48
SYNRG-228ENST00000620424 TRAV12-1A0A0B4J245 112 aa5.8□□□□□ -1.48
SYNRG-228ENST00000620424 H0Y8G0 127 aa5.8□□□□□ -1.48
SYNRG-228ENST00000620424 ODF1Q14990 250 aa5.8□□□□□ -1.48
SYNRG-228ENST00000620424 TMEM223A0PJW6 202 aa5.79□□□□□ -1.48
SYNRG-228ENST00000620424 PFN2P35080 140 aa5.79□□□□□ -1.48
SYNRG-228ENST00000620424 ZNF625Q96I27 306 aaPredicted RBP5.79□□□□□ -1.48
SYNRG-228ENST00000620424 C22orf24Q9Y442 160 aa5.79□□□□□ -1.48
SYNRG-228ENST00000620424 FABP4P15090 132 aa5.78□□□□□ -1.48
SYNRG-228ENST00000620424 SPINK6Q6UWN8 80 aa5.78□□□□□ -1.48
SYNRG-228ENST00000620424 HIST1H2BKO60814 126 aa5.77□□□□□ -1.49
SYNRG-228ENST00000620424 LEPROTL1O95214 131 aa5.77□□□□□ -1.49
SYNRG-228ENST00000620424 IGLV7-43P04211 117 aa5.77□□□□□ -1.49
SYNRG-228ENST00000620424 HIST1H2BJP06899 126 aa5.77□□□□□ -1.49
SYNRG-228ENST00000620424 HIST1H2BOP23527 126 aa5.77□□□□□ -1.49
SYNRG-228ENST00000620424 HIST1H2BBP33778 126 aa5.77□□□□□ -1.49
SYNRG-228ENST00000620424 HIST1H2BDP58876 126 aa5.77□□□□□ -1.49
SYNRG-228ENST00000620424 HIST1H2BCP62807 126 aa5.77□□□□□ -1.49
SYNRG-228ENST00000620424 UBE2BP63146 152 aa5.77□□□□□ -1.49
SYNRG-228ENST00000620424 HIST2H2BEQ16778 126 aa5.77□□□□□ -1.49
SYNRG-228ENST00000620424 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.77□□□□□ -1.49
SYNRG-228ENST00000620424 HIST1H2BHQ93079 126 aa5.77□□□□□ -1.49
SYNRG-228ENST00000620424 HIST1H2BNQ99877 126 aa5.77□□□□□ -1.49
SYNRG-228ENST00000620424 HIST1H2BMQ99879 126 aa5.77□□□□□ -1.49
SYNRG-228ENST00000620424 PMCHL2Q9BQD1 86 aa5.77□□□□□ -1.49
SYNRG-228ENST00000620424 Q8NDZ9 215 aa5.76□□□□□ -1.49
SYNRG-228ENST00000620424 LINC01600Q96MT4 127 aa5.76□□□□□ -1.49
SYNRG-228ENST00000620424 KRTAP9-2Q9BYQ4 174 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms