RNA–Protein interactions for RNA: ENST00000618464.1

SYNGR3-206, Transcript of synaptogyrin 3, humanhuman

TSL 1 (best) BASIC

Gene SYNGR3, Length 1,213 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-206ENST00000618464 PAPPA-AS1Q5QFB9 102 aa13.6□□□□□ -0.23
SYNGR3-206ENST00000618464 PACRGQ96M98 296 aaPredicted RBP13.6□□□□□ -0.23
SYNGR3-206ENST00000618464 TIMM17AQ99595 171 aa13.6□□□□□ -0.23
SYNGR3-206ENST00000618464 TRBV30A0A0K0K1B3 111 aa13.59□□□□□ -0.23
SYNGR3-206ENST00000618464 REG3GQ6UW15 175 aa13.59□□□□□ -0.23
SYNGR3-206ENST00000618464 C18orf32Q8TCD1 76 aa13.59□□□□□ -0.23
SYNGR3-206ENST00000618464 SCGB3A1Q96QR1 104 aa13.59□□□□□ -0.23
SYNGR3-206ENST00000618464 FAM19A3Q7Z5A8 133 aa13.58□□□□□ -0.24
SYNGR3-206ENST00000618464 GEMIN7Q9H840 131 aaKnown RBP13.58□□□□□ -0.24
SYNGR3-206ENST00000618464 LINC01546A6NGU7 62 aa13.57□□□□□ -0.24
SYNGR3-206ENST00000618464 RAB5BP61020 215 aa13.57□□□□□ -0.24
SYNGR3-206ENST00000618464 C1orf137Q5JT78 98 aa13.57□□□□□ -0.24
SYNGR3-206ENST00000618464 ERASQ7Z444 233 aa13.57□□□□□ -0.24
SYNGR3-206ENST00000618464 CDKN2A-AS1Q9UH64 79 aa13.57□□□□□ -0.24
SYNGR3-206ENST00000618464 LINC01549A6NIU2 74 aa13.56□□□□□ -0.24
SYNGR3-206ENST00000618464 NDUFC2-KCTD14E9PQ53 114 aa13.56□□□□□ -0.24
SYNGR3-206ENST00000618464 LINC00614P0C842 121 aa13.56□□□□□ -0.24
SYNGR3-206ENST00000618464 CKS1BP61024 79 aa13.56□□□□□ -0.24
SYNGR3-206ENST00000618464 HERVK_113P63121 156 aa13.56□□□□□ -0.24
SYNGR3-206ENST00000618464 SEC11AP67812 179 aa13.56□□□□□ -0.24
SYNGR3-206ENST00000618464 C6orf226Q5I0X4 101 aa13.56□□□□□ -0.24
SYNGR3-206ENST00000618464 TRGC2P03986 189 aa13.54□□□□□ -0.24
SYNGR3-206ENST00000618464 ODF1Q14990 250 aa13.54□□□□□ -0.24
SYNGR3-206ENST00000618464 KRTAP11-1Q8IUC1 163 aa13.54□□□□□ -0.24
SYNGR3-206ENST00000618464 KRTAP7-1Q8IUC3 87 aa13.54□□□□□ -0.24
SYNGR3-206ENST00000618464 Q8IZM0 81 aa13.54□□□□□ -0.24
SYNGR3-206ENST00000618464 COLCA2A8K830 154 aa13.53□□□□□ -0.24
SYNGR3-206ENST00000618464 SCO1O75880 301 aa13.53□□□□□ -0.24
SYNGR3-206ENST00000618464 M0QXV9 152 aa13.52□□□□□ -0.25
SYNGR3-206ENST00000618464 C9orf129Q5T035 196 aaKnown RBP13.52□□□□□ -0.25
SYNGR3-206ENST00000618464 LINC00469Q8N7U9 141 aa13.52□□□□□ -0.25
SYNGR3-206ENST00000618464 LRP2P98164 4655 aa13.51□□□□□ -0.25
SYNGR3-206ENST00000618464 URB1-AS1Q96HZ7 61 aa13.5□□□□□ -0.25
SYNGR3-206ENST00000618464 UBE2BP63146 152 aa13.49□□□□□ -0.25
SYNGR3-206ENST00000618464 BAGE3Q86Y29 109 aa13.49□□□□□ -0.25
SYNGR3-206ENST00000618464 CST9LQ9H4G1 147 aa13.49□□□□□ -0.25
SYNGR3-206ENST00000618464 TINCRA0A1B0GVN0 87 aa13.48□□□□□ -0.25
SYNGR3-206ENST00000618464 HBDP02042 147 aa13.48□□□□□ -0.25
SYNGR3-206ENST00000618464 IGLV7-43P04211 117 aa13.48□□□□□ -0.25
SYNGR3-206ENST00000618464 KRTAP10-8P60410 259 aa13.48□□□□□ -0.25
SYNGR3-206ENST00000618464 SMIM1B2RUZ4 78 aa13.47□□□□□ -0.25
SYNGR3-206ENST00000618464 F8VRH5 84 aa13.47□□□□□ -0.25
SYNGR3-206ENST00000618464 PMCHL1Q16048 86 aa13.47□□□□□ -0.25
SYNGR3-206ENST00000618464 CHCHD1Q96BP2 118 aaKnown RBP13.47□□□□□ -0.25
SYNGR3-206ENST00000618464 XAGE1AQ9HD64 81 aa13.46□□□□□ -0.25
SYNGR3-206ENST00000618464 RNF213Q63HN8 5207 aa13.45□□□□□ -0.26
SYNGR3-206ENST00000618464 PMVKQ15126 192 aa13.45□□□□□ -0.26
SYNGR3-206ENST00000618464 SPINK8P0C7L1 97 aa13.44□□□□□ -0.26
SYNGR3-206ENST00000618464 S100A1P23297 94 aa13.44□□□□□ -0.26
SYNGR3-206ENST00000618464 COX7B2Q8TF08 81 aa13.44□□□□□ -0.26
SYNGR3-206ENST00000618464 IGLV5-45A0A087WSX0 123 aa13.43□□□□□ -0.26
SYNGR3-206ENST00000618464 A0A096LNJ9 63 aa13.43□□□□□ -0.26
SYNGR3-206ENST00000618464 CXCL5P42830 114 aa13.43□□□□□ -0.26
SYNGR3-206ENST00000618464 NDUFA6P56556 154 aa13.43□□□□□ -0.26
SYNGR3-206ENST00000618464 PDZD11Q5EBL8 140 aa13.43□□□□□ -0.26
SYNGR3-206ENST00000618464 DIRC1Q969H9 104 aa13.43□□□□□ -0.26
SYNGR3-206ENST00000618464 HSBP1O75506 76 aa13.42□□□□□ -0.26
SYNGR3-206ENST00000618464 ATP5LO75964 103 aa13.41□□□□□ -0.26
SYNGR3-206ENST00000618464 ATP6V1G1O75348 118 aa13.39□□□□□ -0.27
SYNGR3-206ENST00000618464 C22orf24Q9Y442 160 aa13.39□□□□□ -0.27
SYNGR3-206ENST00000618464 H0Y9J4 135 aa13.38□□□□□ -0.27
SYNGR3-206ENST00000618464 H3BRM9 83 aa13.36□□□□□ -0.27
SYNGR3-206ENST00000618464 SERF1AO75920 110 aa13.36□□□□□ -0.27
SYNGR3-206ENST00000618464 FAM19A2Q8N3H0 131 aa13.36□□□□□ -0.27
SYNGR3-206ENST00000618464 IGLC3P0DOY3 106 aa13.35□□□□□ -0.27
SYNGR3-206ENST00000618464 PRR26Q8N8Z3 221 aa13.35□□□□□ -0.27
SYNGR3-206ENST00000618464 LBHQ53QV2 105 aaPredicted RBP13.34□□□□□ -0.27
SYNGR3-206ENST00000618464 ZNF22P17026 224 aaPredicted RBP13.32□□□□□ -0.28
SYNGR3-206ENST00000618464 MRPL55Q7Z7F7 128 aaKnown RBP13.32□□□□□ -0.28
SYNGR3-206ENST00000618464 IFI27L1Q96BM0 104 aa13.32□□□□□ -0.28
SYNGR3-206ENST00000618464 HIST1H2BKO60814 126 aa13.3□□□□□ -0.28
SYNGR3-206ENST00000618464 HIST1H2BJP06899 126 aa13.3□□□□□ -0.28
SYNGR3-206ENST00000618464 HIST1H2BOP23527 126 aa13.3□□□□□ -0.28
SYNGR3-206ENST00000618464 HIST1H2BBP33778 126 aa13.3□□□□□ -0.28
SYNGR3-206ENST00000618464 HIST1H2BDP58876 126 aa13.3□□□□□ -0.28
SYNGR3-206ENST00000618464 HIST1H2BCP62807 126 aa13.3□□□□□ -0.28
SYNGR3-206ENST00000618464 HIST2H2BEQ16778 126 aa13.3□□□□□ -0.28
SYNGR3-206ENST00000618464 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.3□□□□□ -0.28
SYNGR3-206ENST00000618464 HIST1H2BHQ93079 126 aa13.3□□□□□ -0.28
SYNGR3-206ENST00000618464 HIST1H2BNQ99877 126 aa13.3□□□□□ -0.28
SYNGR3-206ENST00000618464 HIST1H2BMQ99879 126 aa13.3□□□□□ -0.28
SYNGR3-206ENST00000618464 TP73-AS1Q9UF72 201 aa13.3□□□□□ -0.28
SYNGR3-206ENST00000618464 IGLV5-39A0A0G2JS06 123 aa13.29□□□□□ -0.28
SYNGR3-206ENST00000618464 NUPR1O60356 82 aa13.29□□□□□ -0.28
SYNGR3-206ENST00000618464 LEPROTL1O95214 131 aa13.29□□□□□ -0.28
SYNGR3-206ENST00000618464 LINC00310P59036 64 aa13.29□□□□□ -0.28
SYNGR3-206ENST00000618464 GAGE10A6NGK3 116 aa13.28□□□□□ -0.28
SYNGR3-206ENST00000618464 KRTAP1-4P0C5Y4 121 aa13.28□□□□□ -0.28
SYNGR3-206ENST00000618464 CHTOPQ9Y3Y2 248 aaKnown RBP13.28□□□□□ -0.28
SYNGR3-206ENST00000618464 C11orf86A6NJI1 115 aa13.27□□□□□ -0.29
SYNGR3-206ENST00000618464 RPL37AP8A6NKH3 93 aa13.27□□□□□ -0.29
SYNGR3-206ENST00000618464 PFN2P35080 140 aa13.27□□□□□ -0.29
SYNGR3-206ENST00000618464 LINC00167Q96N53 147 aa13.27□□□□□ -0.29
SYNGR3-206ENST00000618464 HSPB8Q9UJY1 196 aa13.27□□□□□ -0.29
SYNGR3-206ENST00000618464 TRAV12-1A0A0B4J245 112 aa13.26□□□□□ -0.29
SYNGR3-206ENST00000618464 ZNF861PO60384 105 aa13.26□□□□□ -0.29
SYNGR3-206ENST00000618464 FABP4P15090 132 aa13.26□□□□□ -0.29
SYNGR3-206ENST00000618464 H0Y8G0 127 aa13.25□□□□□ -0.29
SYNGR3-206ENST00000618464 TMEM170BQ5T4T1 132 aa13.25□□□□□ -0.29
SYNGR3-206ENST00000618464 IGLV1-50A0A075B6I6 118 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 128.3 ms